RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 MAP3K15Q6ZN16 1313 aa19.42■□□□□ 0.7
LSM5-207ENST00000410044 CAMTA2O94983 1202 aa19.41■□□□□ 0.7
LSM5-207ENST00000410044 RFC4P35249 363 aa19.41■□□□□ 0.7
LSM5-207ENST00000410044 CLEC4GQ6UXB4 293 aa19.41■□□□□ 0.7
LSM5-207ENST00000410044 ZNF330Q9Y3S2 320 aaPredicted RBP19.41■□□□□ 0.7
LSM5-207ENST00000410044 C4AP0C0L4 1744 aa19.41■□□□□ 0.7
LSM5-207ENST00000410044 FKBP5Q13451 457 aaPredicted RBP19.4■□□□□ 0.7
LSM5-207ENST00000410044 KIF6Q6ZMV9 814 aa19.4■□□□□ 0.7
LSM5-207ENST00000410044 RNF123Q5XPI4 1314 aa19.4■□□□□ 0.7
LSM5-207ENST00000410044 USP42Q9H9J4 1324 aaKnown RBP19.4■□□□□ 0.7
LSM5-207ENST00000410044 NUP98P52948 1817 aa19.39■□□□□ 0.7
LSM5-207ENST00000410044 PI4KAP2A4QPH2 592 aa19.39■□□□□ 0.69
LSM5-207ENST00000410044 PHF14O94880 888 aa19.39■□□□□ 0.69
LSM5-207ENST00000410044 ZKSCAN2Q63HK3 967 aa19.39■□□□□ 0.69
LSM5-207ENST00000410044 GIGYF2Q6Y7W6 1299 aaKnown RBP19.39■□□□□ 0.69
LSM5-207ENST00000410044 PI4KAP1Q8N8J0 262 aa19.39■□□□□ 0.69
LSM5-207ENST00000410044 API5Q9BZZ5 524 aaKnown RBP19.39■□□□□ 0.69
LSM5-207ENST00000410044 ADCY9O60503 1353 aa19.39■□□□□ 0.69
LSM5-207ENST00000410044 BCORQ6W2J9 1755 aa19.39■□□□□ 0.69
LSM5-207ENST00000410044 ZPR1O75312 459 aa19.38■□□□□ 0.69
LSM5-207ENST00000410044 ATF7IPQ6VMQ6 1270 aa19.38■□□□□ 0.69
LSM5-207ENST00000410044 RIC3Q7Z5B4 369 aa19.38■□□□□ 0.69
LSM5-207ENST00000410044 BCL2L12Q9HB09 334 aa19.38■□□□□ 0.69
LSM5-207ENST00000410044 HLFQ16534 295 aa19.37■□□□□ 0.69
LSM5-207ENST00000410044 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
LSM5-207ENST00000410044 SLC16A10Q8TF71 515 aa19.37■□□□□ 0.69
LSM5-207ENST00000410044 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
LSM5-207ENST00000410044 METTL22Q9BUU2 404 aaPredicted RBP19.37■□□□□ 0.69
LSM5-207ENST00000410044 MAP3K2Q9Y2U5 619 aa19.37■□□□□ 0.69
LSM5-207ENST00000410044 GYS1P13807 737 aa19.36■□□□□ 0.69
LSM5-207ENST00000410044 TCIRG1Q13488 830 aa19.36■□□□□ 0.69
LSM5-207ENST00000410044 USPL1Q5W0Q7 1092 aa19.36■□□□□ 0.69
LSM5-207ENST00000410044 FRAT1Q92837 279 aaPredicted RBP19.36■□□□□ 0.69
LSM5-207ENST00000410044 ARXQ96QS3 562 aa19.36■□□□□ 0.69
LSM5-207ENST00000410044 ZBTB3Q9H5J0 574 aa19.36■□□□□ 0.69
LSM5-207ENST00000410044 SRP68Q9UHB9 627 aaKnown RBP19.36■□□□□ 0.69
LSM5-207ENST00000410044 ARFGEF2Q9Y6D5 1785 aa19.36■□□□□ 0.69
LSM5-207ENST00000410044 SCN7AQ01118 1682 aa19.36■□□□□ 0.69
LSM5-207ENST00000410044 TRIM27P14373 513 aa19.35■□□□□ 0.69
LSM5-207ENST00000410044 TRIM28Q13263 835 aaKnown RBP19.35■□□□□ 0.69
LSM5-207ENST00000410044 HSP90AB3PQ58FF7 597 aa19.35■□□□□ 0.69
LSM5-207ENST00000410044 ZNF652Q9Y2D9 606 aa19.35■□□□□ 0.69
LSM5-207ENST00000410044 MS4A1P11836 297 aa19.34■□□□□ 0.69
LSM5-207ENST00000410044 ZNF34Q8IZ26 560 aa19.34■□□□□ 0.69
LSM5-207ENST00000410044 NLGN1Q8N2Q7 840 aa19.34■□□□□ 0.69
LSM5-207ENST00000410044 ISCA1Q9BUE6 129 aa19.34■□□□□ 0.69
LSM5-207ENST00000410044 IBTKQ9P2D0 1353 aaPredicted RBP19.33■□□□□ 0.69
LSM5-207ENST00000410044 ABCC4O15439 1325 aa19.33■□□□□ 0.69
LSM5-207ENST00000410044 F6X3S4 739 aa19.33■□□□□ 0.68
LSM5-207ENST00000410044 RRP1P56182 461 aaKnown RBP19.33■□□□□ 0.68
LSM5-207ENST00000410044 PDE3AQ14432 1141 aa19.33■□□□□ 0.68
LSM5-207ENST00000410044 R3HDM1Q15032 1099 aaKnown RBP19.33■□□□□ 0.68
LSM5-207ENST00000410044 BEND3Q5T5X7 828 aa19.33■□□□□ 0.68
LSM5-207ENST00000410044 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.68
LSM5-207ENST00000410044 ATP10DQ9P241 1426 aa19.33■□□□□ 0.68
LSM5-207ENST00000410044 ANKRD36CQ5JPF3 1778 aa19.32■□□□□ 0.68
LSM5-207ENST00000410044 CASZ1Q86V15 1759 aa19.32■□□□□ 0.68
LSM5-207ENST00000410044 TM4SF1P30408 202 aa19.32■□□□□ 0.68
LSM5-207ENST00000410044 INTS3Q68E01 1043 aaKnown RBP19.32■□□□□ 0.68
LSM5-207ENST00000410044 LINS1Q8NG48 757 aa19.32■□□□□ 0.68
LSM5-207ENST00000410044 PXDNLA1KZ92 1463 aa19.32■□□□□ 0.68
LSM5-207ENST00000410044 PLIN1O60240 522 aa19.31■□□□□ 0.68
LSM5-207ENST00000410044 NEXNQ0ZGT2 675 aa19.31■□□□□ 0.68
LSM5-207ENST00000410044 FKBP8Q14318 412 aa19.31■□□□□ 0.68
LSM5-207ENST00000410044 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
LSM5-207ENST00000410044 PDGFDQ9GZP0 370 aaPredicted RBP19.31■□□□□ 0.68
LSM5-207ENST00000410044 COL24A1Q17RW2 1714 aa19.31■□□□□ 0.68
LSM5-207ENST00000410044 MSH5O43196 834 aa19.3■□□□□ 0.68
LSM5-207ENST00000410044 ALDH1L1O75891 902 aa19.3■□□□□ 0.68
LSM5-207ENST00000410044 IGKV5-2P06315 115 aa19.3■□□□□ 0.68
LSM5-207ENST00000410044 CCT4P50991 539 aaKnown RBP19.3■□□□□ 0.68
LSM5-207ENST00000410044 TBC1D9BQ66K14 1250 aa19.3■□□□□ 0.68
LSM5-207ENST00000410044 MYD88Q99836 296 aa19.3■□□□□ 0.68
LSM5-207ENST00000410044 TNNQ9UQP3 1299 aa19.3■□□□□ 0.68
LSM5-207ENST00000410044 N4BP2Q86UW6 1770 aaPredicted RBP19.29■□□□□ 0.68
LSM5-207ENST00000410044 PARP10Q53GL7 1025 aa19.29■□□□□ 0.68
LSM5-207ENST00000410044 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
LSM5-207ENST00000410044 NEURL1BA8MQ27 555 aa19.28■□□□□ 0.68
LSM5-207ENST00000410044 RLBP1P12271 317 aa19.28■□□□□ 0.68
LSM5-207ENST00000410044 NFIXQ14938 502 aa19.28■□□□□ 0.68
LSM5-207ENST00000410044 SLC4A10Q6U841 1118 aa19.28■□□□□ 0.68
LSM5-207ENST00000410044 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
LSM5-207ENST00000410044 CLUAP1Q96AJ1 413 aa19.28■□□□□ 0.68
LSM5-207ENST00000410044 SRCIN1Q9C0H9 1055 aa19.28■□□□□ 0.68
LSM5-207ENST00000410044 NIP7Q9Y221 180 aaKnown RBP eCLIP19.28■□□□□ 0.68
LSM5-207ENST00000410044 ATP5J2-PTCD1G3V325 749 aa19.27■□□□□ 0.68
LSM5-207ENST00000410044 SETDB2Q96T68 719 aa19.27■□□□□ 0.68
LSM5-207ENST00000410044 UBN2Q6ZU65 1347 aa19.26■□□□□ 0.67
LSM5-207ENST00000410044 PSDA5PKW4 1024 aaPredicted RBP19.26■□□□□ 0.67
LSM5-207ENST00000410044 FTSJ3Q8IY81 847 aaKnown RBP19.26■□□□□ 0.67
LSM5-207ENST00000410044 TMEM57Q8N5G2 664 aa19.26■□□□□ 0.67
LSM5-207ENST00000410044 MTFR1LQ9H019 292 aa19.26■□□□□ 0.67
LSM5-207ENST00000410044 GPTP24298 496 aa19.25■□□□□ 0.67
LSM5-207ENST00000410044 GCKRQ14397 625 aa19.25■□□□□ 0.67
LSM5-207ENST00000410044 CWF19L2Q2TBE0 894 aaKnown RBP19.25■□□□□ 0.67
LSM5-207ENST00000410044 PANK1Q8TE04 598 aa19.25■□□□□ 0.67
LSM5-207ENST00000410044 CWC25Q9NXE8 425 aaPredicted RBP19.25■□□□□ 0.67
LSM5-207ENST00000410044 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
LSM5-207ENST00000410044 C20orf194Q5TEA3 1177 aa19.24■□□□□ 0.67
LSM5-207ENST00000410044 SUSD4Q5VX71 490 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms