RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 RUFY3Q7L099 469 aa20.08■□□□□ 0.81
LIMS2-208ENST00000410011 MAP4K4O95819 1239 aaPredicted RBP20.08■□□□□ 0.8
LIMS2-208ENST00000410011 HSP90AA2PQ14568 343 aaPredicted RBP20.08■□□□□ 0.8
LIMS2-208ENST00000410011 CSPP1Q1MSJ5 1256 aa20.08■□□□□ 0.8
LIMS2-208ENST00000410011 VPS53Q5VIR6 699 aa20.08■□□□□ 0.8
LIMS2-208ENST00000410011 KSR2Q6VAB6 950 aa20.08■□□□□ 0.8
LIMS2-208ENST00000410011 GPATCH3Q96I76 525 aa20.08■□□□□ 0.8
LIMS2-208ENST00000410011 ZSCAN31Q96LW9 406 aaPredicted RBP20.08■□□□□ 0.8
LIMS2-208ENST00000410011 STX6O43752 255 aa20.07■□□□□ 0.8
LIMS2-208ENST00000410011 CWC27Q6UX04 472 aaKnown RBP20.07■□□□□ 0.8
LIMS2-208ENST00000410011 UTYO14607 1347 aa20.07■□□□□ 0.8
LIMS2-208ENST00000410011 CHD2O14647 1828 aaKnown RBP20.07■□□□□ 0.8
LIMS2-208ENST00000410011 RNMTO43148 476 aaKnown RBP20.07■□□□□ 0.8
LIMS2-208ENST00000410011 KCNQ3O43525 872 aa20.07■□□□□ 0.8
LIMS2-208ENST00000410011 GADD45BO75293 160 aaPredicted RBP20.07■□□□□ 0.8
LIMS2-208ENST00000410011 ZNF530Q6P9A1 599 aaPredicted RBP20.07■□□□□ 0.8
LIMS2-208ENST00000410011 SH2B1Q9NRF2 756 aaPredicted RBP20.07■□□□□ 0.8
LIMS2-208ENST00000410011 HYPKQ9NX55 129 aa20.07■□□□□ 0.8
LIMS2-208ENST00000410011 GIGYF1O75420 1035 aaPredicted RBP20.06■□□□□ 0.8
LIMS2-208ENST00000410011 UBE2HP62256 183 aa20.06■□□□□ 0.8
LIMS2-208ENST00000410011 CCDC183Q5T5S1 534 aa20.06■□□□□ 0.8
LIMS2-208ENST00000410011 EVI5LQ96CN4 794 aa20.06■□□□□ 0.8
LIMS2-208ENST00000410011 ZSWIM6Q9HCJ5 1215 aa20.06■□□□□ 0.8
LIMS2-208ENST00000410011 SNRKQ9NRH2 765 aa20.06■□□□□ 0.8
LIMS2-208ENST00000410011 DIAPH3Q9NSV4 1193 aa20.06■□□□□ 0.8
LIMS2-208ENST00000410011 SYT1P21579 422 aa20.05■□□□□ 0.8
LIMS2-208ENST00000410011 C14orf37Q86TY3 774 aa20.05■□□□□ 0.8
LIMS2-208ENST00000410011 HIP1O00291 1037 aa20.04■□□□□ 0.8
LIMS2-208ENST00000410011 OS9Q13438 667 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-208ENST00000410011 SMC3Q9UQE7 1217 aa20.04■□□□□ 0.8
LIMS2-208ENST00000410011 F13A1P00488 732 aa20.04■□□□□ 0.8
LIMS2-208ENST00000410011 C9orf78Q9NZ63 289 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-208ENST00000410011 MAP3K2Q9Y2U5 619 aa20.04■□□□□ 0.8
LIMS2-208ENST00000410011 NECTIN1Q15223 517 aa20.03■□□□□ 0.8
LIMS2-208ENST00000410011 SPG7Q9UQ90 795 aa20.03■□□□□ 0.8
LIMS2-208ENST00000410011 PSME1Q06323 249 aa20.03■□□□□ 0.8
LIMS2-208ENST00000410011 LINS1Q8NG48 757 aa20.03■□□□□ 0.8
LIMS2-208ENST00000410011 IFIT2P09913 472 aaKnown RBP20.02■□□□□ 0.8
LIMS2-208ENST00000410011 CASTP20810 708 aaKnown RBP20.02■□□□□ 0.8
LIMS2-208ENST00000410011 C1orf141Q5JVX7 400 aa20.02■□□□□ 0.8
LIMS2-208ENST00000410011 MPRIPQ6WCQ1 1025 aa20.02■□□□□ 0.8
LIMS2-208ENST00000410011 ARHGEF25Q86VW2 580 aa20.02■□□□□ 0.8
LIMS2-208ENST00000410011 GDPD2Q9HCC8 539 aa20.02■□□□□ 0.8
LIMS2-208ENST00000410011 RNF214Q8ND24 703 aa20.02■□□□□ 0.79
LIMS2-208ENST00000410011 PDRG1Q9NUG6 133 aa20.02■□□□□ 0.79
LIMS2-208ENST00000410011 CYP46A1Q9Y6A2 500 aa20.02■□□□□ 0.79
LIMS2-208ENST00000410011 SLIT3O75094 1523 aa20.01■□□□□ 0.79
LIMS2-208ENST00000410011 TCHHQ07283 1943 aa20.01■□□□□ 0.79
LIMS2-208ENST00000410011 PTH1RQ03431 593 aa20.01■□□□□ 0.79
LIMS2-208ENST00000410011 CNPY2Q9Y2B0 182 aa20.01■□□□□ 0.79
LIMS2-208ENST00000410011 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
LIMS2-208ENST00000410011 ANXA1P04083 346 aa20■□□□□ 0.79
LIMS2-208ENST00000410011 GLIPR1L2Q4G1C9 344 aa20■□□□□ 0.79
LIMS2-208ENST00000410011 MAP4K1Q92918 833 aa20■□□□□ 0.79
LIMS2-208ENST00000410011 CCDC171Q6TFL3 1326 aa20■□□□□ 0.79
LIMS2-208ENST00000410011 ADAMTS7Q9UKP4 1686 aa20■□□□□ 0.79
LIMS2-208ENST00000410011 RGPD2P0DJD1 1756 aa20■□□□□ 0.79
LIMS2-208ENST00000410011 ZKSCAN1P17029 563 aaPredicted RBP19.99■□□□□ 0.79
LIMS2-208ENST00000410011 ALDH8A1Q9H2A2 487 aaPredicted RBP19.99■□□□□ 0.79
LIMS2-208ENST00000410011 GRM8O00222 908 aa19.99■□□□□ 0.79
LIMS2-208ENST00000410011 DDX58O95786 925 aaKnown RBP19.99■□□□□ 0.79
LIMS2-208ENST00000410011 ANKLE2Q86XL3 938 aa19.99■□□□□ 0.79
LIMS2-208ENST00000410011 DDX21Q9NR30 783 aaKnown RBP eCLIP19.99■□□□□ 0.79
LIMS2-208ENST00000410011 MTMR6Q9Y217 621 aa19.99■□□□□ 0.79
LIMS2-208ENST00000410011 GCP02774 474 aa19.98■□□□□ 0.79
LIMS2-208ENST00000410011 LRRC59Q96AG4 307 aaKnown RBP19.98■□□□□ 0.79
LIMS2-208ENST00000410011 JAKMIP1Q96N16 626 aaKnown RBP19.98■□□□□ 0.79
LIMS2-208ENST00000410011 SIPA1L3O60292 1781 aaPredicted RBP19.98■□□□□ 0.79
LIMS2-208ENST00000410011 PRPF40BQ6NWY9 871 aaKnown RBP19.98■□□□□ 0.79
LIMS2-208ENST00000410011 PDCL3Q9H2J4 239 aa19.98■□□□□ 0.79
LIMS2-208ENST00000410011 PSMA5P28066 241 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 GJB2P29033 226 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 PROSER3Q2NL68 480 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 ADCK5Q3MIX3 580 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 ESCO1Q5FWF5 840 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 AACSQ86V21 672 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 KAZALD1Q96I82 304 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 PXDNQ92626 1479 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 SASH1O94885 1247 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 LARGE1O95461 756 aa19.97■□□□□ 0.79
LIMS2-208ENST00000410011 XPCQ01831 940 aaPredicted RBP19.97■□□□□ 0.79
LIMS2-208ENST00000410011 FOXD4L6Q3SYB3 417 aaPredicted RBP19.97■□□□□ 0.79
LIMS2-208ENST00000410011 FOXD4L3Q6VB84 417 aaPredicted RBP19.97■□□□□ 0.79
LIMS2-208ENST00000410011 G3BP1Q13283 466 aaKnown RBP eCLIP19.96■□□□□ 0.79
LIMS2-208ENST00000410011 FUCA2Q9BTY2 467 aa19.96■□□□□ 0.79
LIMS2-208ENST00000410011 CREB3L3Q68CJ9 461 aa19.96■□□□□ 0.79
LIMS2-208ENST00000410011 PA2G4Q9UQ80 394 aaKnown RBP19.96■□□□□ 0.79
LIMS2-208ENST00000410011 ANKRD1Q15327 319 aa19.95■□□□□ 0.78
LIMS2-208ENST00000410011 CWF19L2Q2TBE0 894 aaKnown RBP19.95■□□□□ 0.78
LIMS2-208ENST00000410011 TSGA10IPQ3SY00 556 aa19.95■□□□□ 0.78
LIMS2-208ENST00000410011 CCDC83Q8IWF9 413 aa19.95■□□□□ 0.78
LIMS2-208ENST00000410011 SUCLG2Q96I99 432 aa19.95■□□□□ 0.78
LIMS2-208ENST00000410011 R3HCC1Q9Y3T6 440 aaKnown RBP19.95■□□□□ 0.78
LIMS2-208ENST00000410011 RBM8AQ9Y5S9 174 aaKnown RBP19.95■□□□□ 0.78
LIMS2-208ENST00000410011 EAF2Q96CJ1 260 aaPredicted RBP19.94■□□□□ 0.78
LIMS2-208ENST00000410011 MRC1P22897 1456 aa19.94■□□□□ 0.78
LIMS2-208ENST00000410011 CPA1P15085 419 aa19.94■□□□□ 0.78
LIMS2-208ENST00000410011 PDIA6Q15084 440 aa19.94■□□□□ 0.78
LIMS2-208ENST00000410011 ME3Q16798 604 aa19.94■□□□□ 0.78
LIMS2-208ENST00000410011 ANKRD24Q8TF21 1146 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms