RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 LIMCH1Q9UPQ0 1083 aa18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 GLRX3O76003 335 aaKnown RBP18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 MPRIPQ6WCQ1 1025 aa18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 LRRC59Q96AG4 307 aaKnown RBP18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 CNPY2Q9Y2B0 182 aa18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 ZSCAN22P10073 491 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 TMEM87AQ8NBN3 555 aa18.26■□□□□ 0.51
LYSMD4-204ENST00000409796 AKAP4Q5JQC9 854 aa18.25■□□□□ 0.51
LYSMD4-204ENST00000409796 CHMP4AQ9BY43 222 aa18.25■□□□□ 0.51
LYSMD4-204ENST00000409796 MTX1Q13505 466 aa18.25■□□□□ 0.51
LYSMD4-204ENST00000409796 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
LYSMD4-204ENST00000409796 PRDM4Q9UKN5 801 aa18.25■□□□□ 0.51
LYSMD4-204ENST00000409796 PHF14O94880 888 aa18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 LARGE1O95461 756 aa18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 CASTP20810 708 aaKnown RBP18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 SYT1P21579 422 aa18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 PTH1RQ03431 593 aa18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 STX6O43752 255 aa18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 CLASRPQ8N2M8 674 aaKnown RBP18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 RBM33Q96EV2 1170 aaKnown RBP18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 PA2G4Q9UQ80 394 aaKnown RBP18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 MAP3K2Q9Y2U5 619 aa18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.24■□□□□ 0.51
LYSMD4-204ENST00000409796 DBF4Q9UBU7 674 aaPredicted RBP18.23■□□□□ 0.51
LYSMD4-204ENST00000409796 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
LYSMD4-204ENST00000409796 R3HCC1Q9Y3T6 440 aaKnown RBP18.23■□□□□ 0.51
LYSMD4-204ENST00000409796 MCM5P33992 734 aa18.23■□□□□ 0.51
LYSMD4-204ENST00000409796 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
LYSMD4-204ENST00000409796 ECHDC1Q9NTX5 307 aa18.23■□□□□ 0.51
LYSMD4-204ENST00000409796 TPRNQ4KMQ1 711 aa18.22■□□□□ 0.51
LYSMD4-204ENST00000409796 PLEKHO1Q53GL0 409 aaPredicted RBP18.22■□□□□ 0.51
LYSMD4-204ENST00000409796 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
LYSMD4-204ENST00000409796 C9orf78Q9NZ63 289 aaPredicted RBP18.22■□□□□ 0.51
LYSMD4-204ENST00000409796 RUFY2Q8WXA3 655 aa18.22■□□□□ 0.51
LYSMD4-204ENST00000409796 PXDNQ92626 1479 aa18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 RNMTO43148 476 aaKnown RBP18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 DTNBO60941 627 aa18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 ALDH1L1O75891 902 aa18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 F13A1P00488 732 aa18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 ADCK5Q3MIX3 580 aa18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 CCDC183Q5T5S1 534 aa18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 PRPF40BQ6NWY9 871 aaKnown RBP18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 TERF1P54274 439 aa18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 CCDC83Q8IWF9 413 aa18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 JAKMIP1Q96N16 626 aaKnown RBP18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
LYSMD4-204ENST00000409796 CWF19L2Q2TBE0 894 aaKnown RBP18.2■□□□□ 0.5
LYSMD4-204ENST00000409796 CHD2O14647 1828 aaKnown RBP18.2■□□□□ 0.5
LYSMD4-204ENST00000409796 PRAMEF22A3QJZ6 481 aa18.2■□□□□ 0.5
LYSMD4-204ENST00000409796 IFIT2P09913 472 aaKnown RBP18.2■□□□□ 0.5
LYSMD4-204ENST00000409796 PSME1Q06323 249 aa18.2■□□□□ 0.5
LYSMD4-204ENST00000409796 KSR2Q6VAB6 950 aa18.2■□□□□ 0.5
LYSMD4-204ENST00000409796 KCNH5Q8NCM2 988 aa18.2■□□□□ 0.5
LYSMD4-204ENST00000409796 PDRG1Q9NUG6 133 aa18.2■□□□□ 0.5
LYSMD4-204ENST00000409796 GIGYF1O75420 1035 aaPredicted RBP18.19■□□□□ 0.5
LYSMD4-204ENST00000409796 PTMAP06454 111 aaKnown RBP18.19■□□□□ 0.5
LYSMD4-204ENST00000409796 PHRF1Q9P1Y6 1649 aaKnown RBP18.19■□□□□ 0.5
LYSMD4-204ENST00000409796 GJB2P29033 226 aa18.19■□□□□ 0.5
LYSMD4-204ENST00000409796 UBE2HP62256 183 aa18.19■□□□□ 0.5
LYSMD4-204ENST00000409796 GPATCH3Q96I76 525 aa18.19■□□□□ 0.5
LYSMD4-204ENST00000409796 ADGRL3Q9HAR2 1447 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 FIBPO43427 364 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 ESCO1Q5FWF5 840 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 C1orf141Q5JVX7 400 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 AACSQ86V21 672 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 ERC1Q8IUD2 1116 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 KCNB2Q92953 911 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 ZSWIM6Q9HCJ5 1215 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 AMOTQ4VCS5 1084 aa18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 DDX54Q8TDD1 881 aaKnown RBP18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.18■□□□□ 0.5
LYSMD4-204ENST00000409796 CSPP1Q1MSJ5 1256 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 UVSSAQ2YD98 709 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 FAM184AQ8NB25 1140 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 EVI5LQ96CN4 794 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 TM6SF1Q9BZW5 370 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 CYP46A1Q9Y6A2 500 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 ST3GAL1Q11201 340 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 NECTIN1Q15223 517 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 SUCLG2Q96I99 432 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 MTMR6Q9Y217 621 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
LYSMD4-204ENST00000409796 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 NCAPD2Q15021 1401 aa18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 CERKQ8TCT0 537 aa18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 KAZALD1Q96I82 304 aa18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 ZSCAN31Q96LW9 406 aaPredicted RBP18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 USP25Q9UHP3 1055 aa18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 ATP6V1DQ9Y5K8 247 aa18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 SASH1O94885 1247 aa18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 HCLS1P14317 486 aaPredicted RBP18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 SH2B1Q9NRF2 756 aaPredicted RBP18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 RBM8AQ9Y5S9 174 aaKnown RBP18.16■□□□□ 0.5
LYSMD4-204ENST00000409796 LETM1O95202 739 aaPredicted RBP18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 DNM1Q05193 864 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-204ENST00000409796 FAM227BQ96M60 508 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms