RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 IFFO1Q0D2I5 559 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 PARP3Q9Y6F1 533 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 CCDC194A0A1B0GVG4 234 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 STAMBPO95630 424 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 PAIP2Q9BPZ3 127 aaKnown RBP9.74□□□□□ -0.85
SCN9A-203ENST00000409672 PPP6R1Q9UPN7 881 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 AMOTL2Q9Y2J4 779 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 GPR162Q16538 588 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 HARSP12081 509 aaKnown RBP9.73□□□□□ -0.85
SCN9A-203ENST00000409672 FKBP15Q5T1M5 1219 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 MICU3Q86XE3 530 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 GOLGA8BA8MQT2 603 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 HEATR3Q7Z4Q2 680 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 NME9Q86XW9 330 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 HDAC9Q9UKV0 1011 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 POGZQ7Z3K3 1410 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 WASF1Q92558 559 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 FBXO31Q5XUX0 539 aaPredicted RBP9.73□□□□□ -0.85
SCN9A-203ENST00000409672 U3KPZ7 1027 aaPredicted RBP9.73□□□□□ -0.85
SCN9A-203ENST00000409672 GOLGA8AA7E2F4 631 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 HSPA2P54652 639 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 TMEM67Q5HYA8 995 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
SCN9A-203ENST00000409672 SORBS3O60504 671 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 CHD1LQ86WJ1 897 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 NBPF8Q3BBV2 869 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 NBPF14Q5TI25 921 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
SCN9A-203ENST00000409672 KCNH5Q8NCM2 988 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 MTIF2P46199 727 aaKnown RBP9.72□□□□□ -0.85
SCN9A-203ENST00000409672 ARHGAP29Q52LW3 1261 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 SAP30BPQ9UHR5 308 aaKnown RBP9.72□□□□□ -0.85
SCN9A-203ENST00000409672 RAB3GAP1Q15042 981 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 C8orf76Q96K31 380 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 CWC15Q9P013 229 aaKnown RBP9.72□□□□□ -0.85
SCN9A-203ENST00000409672 UQCRHLA0A096LP55 91 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 BAG3O95817 575 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 TICAM2Q86XR7 235 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 ARID5AQ03989 594 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 CCDC40Q4G0X9 1142 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 JDP2Q8WYK2 163 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 LUZP1Q86V48 1076 aa9.72□□□□□ -0.85
SCN9A-203ENST00000409672 TOM1O60784 492 aa9.71□□□□□ -0.85
SCN9A-203ENST00000409672 CDC5LQ99459 802 aaKnown RBP9.71□□□□□ -0.85
SCN9A-203ENST00000409672 SLC26A6Q9BXS9 759 aa9.71□□□□□ -0.85
SCN9A-203ENST00000409672 SBNO2Q9Y2G9 1366 aa9.71□□□□□ -0.85
SCN9A-203ENST00000409672 SLC39A6Q13433 755 aa9.71□□□□□ -0.85
SCN9A-203ENST00000409672 NOP9Q86U38 636 aaKnown RBP9.71□□□□□ -0.85
SCN9A-203ENST00000409672 CALML4Q96GE6 196 aa9.71□□□□□ -0.85
SCN9A-203ENST00000409672 MRVI1Q9Y6F6 885 aa9.71□□□□□ -0.85
SCN9A-203ENST00000409672 PPP1R42Q7Z4L9 355 aa9.71□□□□□ -0.85
SCN9A-203ENST00000409672 TMEM57Q8N5G2 664 aa9.71□□□□□ -0.85
SCN9A-203ENST00000409672 NIP7Q9Y221 180 aaKnown RBP eCLIP9.71□□□□□ -0.85
SCN9A-203ENST00000409672 CBFA2T2O43439 604 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 NUP62CLQ9H1M0 184 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 FGD5Q6ZNL6 1462 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 CCP110O43303 1012 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 PPP2R5CQ13362 524 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 CCDC148Q8NFR7 591 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 UBE3BQ7Z3V4 1068 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.86
SCN9A-203ENST00000409672 CASQ1P31415 396 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 HLTFQ14527 1009 aaKnown RBP eCLIP9.71□□□□□ -0.866e-7■■■□□ 14.9
SCN9A-203ENST00000409672 MSL1Q68DK7 614 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 LRRC2Q9BYS8 371 aa9.71□□□□□ -0.86
SCN9A-203ENST00000409672 ANKRD50Q9ULJ7 1429 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 GOLGA6L7A0A1B0GV03 622 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 CNNM3Q8NE01 707 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 GCC1Q96CN9 775 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 NSFL1CQ9UNZ2 370 aaKnown RBP9.7□□□□□ -0.86
SCN9A-203ENST00000409672 RAB34Q9BZG1 259 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 RBM25P49756 843 aaKnown RBP9.7□□□□□ -0.86
SCN9A-203ENST00000409672 MAEAQ7L5Y9 396 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 TXLNBQ8N3L3 684 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 PPP1R14CQ8TAE6 165 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 RSPH6AQ9H0K4 717 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 EIF6P56537 245 aaKnown RBP9.7□□□□□ -0.86
SCN9A-203ENST00000409672 HELBQ8NG08 1087 aaPredicted RBP9.7□□□□□ -0.86
SCN9A-203ENST00000409672 MYOM3Q5VTT5 1437 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 TSNARE1Q96NA8 513 aa9.7□□□□□ -0.86
SCN9A-203ENST00000409672 PDE4BQ07343 736 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 NCBP1Q09161 790 aaKnown RBP9.69□□□□□ -0.86
SCN9A-203ENST00000409672 ANO3Q9BYT9 981 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 CYP7A1P22680 504 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 PSMC4P43686 418 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 SPECC1Q5M775 1068 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 CWC25Q9NXE8 425 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-203ENST00000409672 TFIP11Q9UBB9 837 aaKnown RBP9.69□□□□□ -0.86
SCN9A-203ENST00000409672 WDR33Q9C0J8 1336 aaKnown RBP9.69□□□□□ -0.86
SCN9A-203ENST00000409672 FERP16591 822 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 AFMP43652 599 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 PLIN2Q99541 437 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 ATP2C2O75185 946 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 CNGA1P29973 690 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 TMCO4Q5TGY1 634 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 SKAP1Q86WV1 359 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
SCN9A-203ENST00000409672 STX6O43752 255 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms