RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 AOX1Q06278 1338 aa13.53□□□□□ -0.24
ITGA6-203ENST00000409532 VPS37CA5D8V6 355 aaPredicted RBP13.53□□□□□ -0.24
ITGA6-203ENST00000409532 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
ITGA6-203ENST00000409532 PDLIM2Q96JY6 352 aa13.53□□□□□ -0.24
ITGA6-203ENST00000409532 FAM227BQ96M60 508 aa13.53□□□□□ -0.24
ITGA6-203ENST00000409532 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
ITGA6-203ENST00000409532 CEMIPQ8WUJ3 1361 aa13.53□□□□□ -0.24
ITGA6-203ENST00000409532 STX6O43752 255 aa13.53□□□□□ -0.24
ITGA6-203ENST00000409532 AKAP4Q5JQC9 854 aa13.53□□□□□ -0.24
ITGA6-203ENST00000409532 ZNF830Q96NB3 372 aaPredicted RBP13.53□□□□□ -0.24
ITGA6-203ENST00000409532 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
ITGA6-203ENST00000409532 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.24
ITGA6-203ENST00000409532 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.24
ITGA6-203ENST00000409532 SYAP1Q96A49 352 aaPredicted RBP13.52□□□□□ -0.24
ITGA6-203ENST00000409532 TTC14Q96N46 770 aa13.52□□□□□ -0.24
ITGA6-203ENST00000409532 BOLA2Q9H3K6 86 aa13.52□□□□□ -0.24
ITGA6-203ENST00000409532 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.24
ITGA6-203ENST00000409532 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.25
ITGA6-203ENST00000409532 RPAP1Q9BWH6 1393 aaPredicted RBP13.52□□□□□ -0.25
ITGA6-203ENST00000409532 CACNA1FO60840 1977 aa13.52□□□□□ -0.25
ITGA6-203ENST00000409532 GCP02774 474 aa13.52□□□□□ -0.25
ITGA6-203ENST00000409532 ZSCAN22P10073 491 aaPredicted RBP13.52□□□□□ -0.25
ITGA6-203ENST00000409532 ZC3H6P61129 1189 aaKnown RBP13.52□□□□□ -0.25
ITGA6-203ENST00000409532 FERMT3Q86UX7 667 aa13.52□□□□□ -0.25
ITGA6-203ENST00000409532 PDRG1Q9NUG6 133 aa13.52□□□□□ -0.25
ITGA6-203ENST00000409532 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
ITGA6-203ENST00000409532 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
ITGA6-203ENST00000409532 OFD1O75665 1012 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 GJB2P29033 226 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 USP25Q9UHP3 1055 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 HCLS1P14317 486 aaPredicted RBP13.51□□□□□ -0.25
ITGA6-203ENST00000409532 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 ARID3AQ99856 593 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 BICC1Q9H694 974 aaKnown RBP13.51□□□□□ -0.25
ITGA6-203ENST00000409532 TUBGCP6Q96RT7 1819 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 DNM1Q05193 864 aaKnown RBP13.51□□□□□ -0.25
ITGA6-203ENST00000409532 FAM173BQ6P4H8 233 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
ITGA6-203ENST00000409532 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 NDUFB9Q9Y6M9 179 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
ITGA6-203ENST00000409532 KSR2Q6VAB6 950 aa13.5□□□□□ -0.25
ITGA6-203ENST00000409532 EAF2Q96CJ1 260 aaPredicted RBP13.5□□□□□ -0.25
ITGA6-203ENST00000409532 ARHGAP23Q9P227 1491 aa13.5□□□□□ -0.25
ITGA6-203ENST00000409532 G3BP1Q13283 466 aaKnown RBP eCLIP13.5□□□□□ -0.25
ITGA6-203ENST00000409532 RIC3Q7Z5B4 369 aa13.5□□□□□ -0.25
ITGA6-203ENST00000409532 RUFY2Q8WXA3 655 aa13.5□□□□□ -0.25
ITGA6-203ENST00000409532 ZKSCAN5Q9Y2L8 839 aa13.5□□□□□ -0.25
ITGA6-203ENST00000409532 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.5□□□□□ -0.25
ITGA6-203ENST00000409532 GIMAP6Q6P9H5 292 aa13.5□□□□□ -0.25
ITGA6-203ENST00000409532 HYPKQ9NX55 129 aa13.5□□□□□ -0.25
ITGA6-203ENST00000409532 CYP46A1Q9Y6A2 500 aa13.5□□□□□ -0.25
ITGA6-203ENST00000409532 PXDNLA1KZ92 1463 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 SLIT1O75093 1534 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 RGPD2P0DJD1 1756 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 F13A1P00488 732 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
ITGA6-203ENST00000409532 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.49□□□□□ -0.25
ITGA6-203ENST00000409532 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 ANKARQ7Z5J8 1434 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 SASH1O94885 1247 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 STK3Q13188 491 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 KCNH5Q8NCM2 988 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 RBM8AQ9Y5S9 174 aaKnown RBP13.49□□□□□ -0.25
ITGA6-203ENST00000409532 LTN1O94822 1766 aa13.49□□□□□ -0.25
ITGA6-203ENST00000409532 PXDNQ92626 1479 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 GRM8O00222 908 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 FSD1Q9BTV5 496 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 TAF6LQ9Y6J9 622 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
ITGA6-203ENST00000409532 ME3Q16798 604 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 KAZALD1Q96I82 304 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 TTC41PQ6P2S7 1318 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 HOXB7P09629 217 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 ANKLE2Q86XL3 938 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 UBE2Q2Q8WVN8 375 aa13.48□□□□□ -0.25
ITGA6-203ENST00000409532 PHF14O94880 888 aa13.47□□□□□ -0.25
ITGA6-203ENST00000409532 CHGBP05060 677 aa13.47□□□□□ -0.25
ITGA6-203ENST00000409532 ZKSCAN1P17029 563 aaPredicted RBP13.47□□□□□ -0.25
ITGA6-203ENST00000409532 FAM13BQ9NYF5 915 aa13.47□□□□□ -0.25
ITGA6-203ENST00000409532 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
ITGA6-203ENST00000409532 DNTTIP2Q5QJE6 756 aaKnown RBP13.47□□□□□ -0.25
ITGA6-203ENST00000409532 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
ITGA6-203ENST00000409532 C17orf53Q8N3J3 647 aaPredicted RBP13.47□□□□□ -0.25
ITGA6-203ENST00000409532 NLRP2Q9NX02 1062 aa13.47□□□□□ -0.25
ITGA6-203ENST00000409532 CCDC171Q6TFL3 1326 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 AMOTQ4VCS5 1084 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 HS1BP3Q53T59 392 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 CCDC183Q5T5S1 534 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 EVI5LQ96CN4 794 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 TPCN1Q9ULQ1 816 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
ITGA6-203ENST00000409532 ALDH1L1O75891 902 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 TPM2P07951 284 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 MYD88Q99836 296 aa13.46□□□□□ -0.25
ITGA6-203ENST00000409532 ST3GAL1Q11201 340 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms