RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
AFF3-202ENST00000409236 SATB1Q01826 763 aa15.88■□□□□ 0.13
AFF3-202ENST00000409236 CCDC38Q502W7 563 aa15.88■□□□□ 0.13
AFF3-202ENST00000409236 VCX3AQ9NNX9 186 aa15.88■□□□□ 0.13
AFF3-202ENST00000409236 ATP2C2O75185 946 aa15.88■□□□□ 0.13
AFF3-202ENST00000409236 AMPD3Q01432 767 aa15.88■□□□□ 0.13
AFF3-202ENST00000409236 KLHL10Q6JEL2 608 aa15.88■□□□□ 0.13
AFF3-202ENST00000409236 DRC1Q96MC2 740 aa15.87■□□□□ 0.13
AFF3-202ENST00000409236 SYTL4Q96C24 671 aaPredicted RBP15.87■□□□□ 0.13
AFF3-202ENST00000409236 DDX19AQ9NUU7 478 aaKnown RBP15.87■□□□□ 0.13
AFF3-202ENST00000409236 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
AFF3-202ENST00000409236 BACH2Q9BYV9 841 aa15.87■□□□□ 0.13
AFF3-202ENST00000409236 NDC80O14777 642 aa15.87■□□□□ 0.13
AFF3-202ENST00000409236 ARL1P40616 181 aaPredicted RBP15.87■□□□□ 0.13
AFF3-202ENST00000409236 SNX16P57768 344 aa15.87■□□□□ 0.13
AFF3-202ENST00000409236 ARFGAP2Q8N6H7 521 aa15.87■□□□□ 0.13
AFF3-202ENST00000409236 FAM76AQ8TAV0 307 aa15.87■□□□□ 0.13
AFF3-202ENST00000409236 CUX2O14529 1486 aa15.87■□□□□ 0.13
AFF3-202ENST00000409236 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.87■□□□□ 0.13
AFF3-202ENST00000409236 WHAMMQ8TF30 809 aa15.87■□□□□ 0.13
AFF3-202ENST00000409236 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 EHMT1Q9H9B1 1298 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 ARHGAP24Q8N264 748 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 NCAPGQ9BPX3 1015 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 A0A087WZG4 1122 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 NOP2P46087 812 aaKnown RBP15.86■□□□□ 0.13
AFF3-202ENST00000409236 DNA2P51530 1060 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 RAB3IPQ96QF0 476 aaPredicted RBP15.86■□□□□ 0.13
AFF3-202ENST00000409236 CTAGE15A4D2H0 777 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 CTAGE8P0CG41 777 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 CCDC96Q2M329 555 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 CTAGE4Q8IX94 777 aa15.86■□□□□ 0.13
AFF3-202ENST00000409236 WASHC2CQ9Y4E1 1318 aa15.85■□□□□ 0.13
AFF3-202ENST00000409236 NACADO15069 1562 aa15.85■□□□□ 0.13
AFF3-202ENST00000409236 CEP85LQ5SZL2 805 aa15.85■□□□□ 0.13
AFF3-202ENST00000409236 FYB2Q5VWT5 728 aa15.85■□□□□ 0.13
AFF3-202ENST00000409236 TMC6Q7Z403 805 aa15.85■□□□□ 0.13
AFF3-202ENST00000409236 AKAP2Q9Y2D5 859 aa15.85■□□□□ 0.13
AFF3-202ENST00000409236 ADCY5O95622 1261 aa15.85■□□□□ 0.13
AFF3-202ENST00000409236 ARHGAP25P42331 645 aa15.85■□□□□ 0.13
AFF3-202ENST00000409236 INTS8Q75QN2 995 aaKnown RBP15.85■□□□□ 0.13
AFF3-202ENST00000409236 NEDD9Q14511 834 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 MIER3Q7Z3K6 550 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 CCDC170Q8IYT3 715 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 DDX27Q96GQ7 796 aaKnown RBP15.84■□□□□ 0.13
AFF3-202ENST00000409236 PSMD1Q99460 953 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 TSGA10Q9BZW7 698 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 STRN4Q9NRL3 753 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 RPGRIP1LQ68CZ1 1315 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 MCM6Q14566 821 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 MAP3K7CLP57077 242 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 PDE1CQ14123 709 aaPredicted RBP15.84■□□□□ 0.13
AFF3-202ENST00000409236 CNNM1Q9NRU3 951 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 USP37Q86T82 979 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 AEBP2Q6ZN18 517 aaPredicted RBP15.84■□□□□ 0.13
AFF3-202ENST00000409236 CCDC63Q8NA47 563 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 ZC4H2Q9NQZ6 224 aa15.84■□□□□ 0.13
AFF3-202ENST00000409236 HDXQ7Z353 690 aa15.83■□□□□ 0.13
AFF3-202ENST00000409236 DNAJC8O75937 253 aaPredicted RBP15.83■□□□□ 0.13
AFF3-202ENST00000409236 GNG11P61952 73 aa15.83■□□□□ 0.13
AFF3-202ENST00000409236 LRCH2Q5VUJ6 765 aa15.83■□□□□ 0.13
AFF3-202ENST00000409236 CCDC144CPQ8IYA2 1237 aa15.83■□□□□ 0.13
AFF3-202ENST00000409236 USP25Q9UHP3 1055 aa15.83■□□□□ 0.13
AFF3-202ENST00000409236 IRX4P78413 519 aa15.83■□□□□ 0.12
AFF3-202ENST00000409236 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.12
AFF3-202ENST00000409236 LRRC27Q9C0I9 530 aa15.83■□□□□ 0.12
AFF3-202ENST00000409236 JAKMIP1Q96N16 626 aaKnown RBP15.83■□□□□ 0.12
AFF3-202ENST00000409236 TRMT1Q9NXH9 659 aaKnown RBP15.83■□□□□ 0.12
AFF3-202ENST00000409236 SMAP1Q8IYB5 467 aaPredicted RBP15.83■□□□□ 0.12
AFF3-202ENST00000409236 AFAP1L2Q8N4X5 818 aa15.82■□□□□ 0.12
AFF3-202ENST00000409236 HVCN1Q96D96 273 aa15.82■□□□□ 0.12
AFF3-202ENST00000409236 CCDC62Q6P9F0 684 aa15.82■□□□□ 0.12
AFF3-202ENST00000409236 MTIF2P46199 727 aaKnown RBP15.82■□□□□ 0.12
AFF3-202ENST00000409236 EFCAB2Q5VUJ9 269 aa15.82■□□□□ 0.12
AFF3-202ENST00000409236 LUC7L3O95232 432 aaKnown RBP15.82■□□□□ 0.12
AFF3-202ENST00000409236 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
AFF3-202ENST00000409236 RMND1Q9NWS8 449 aa15.82■□□□□ 0.12
AFF3-202ENST00000409236 RGS22Q8NE09 1264 aa15.82■□□□□ 0.12
AFF3-202ENST00000409236 PRPF31Q8WWY3 499 aaKnown RBP15.82■□□□□ 0.12
AFF3-202ENST00000409236 PDZRN3Q9UPQ7 1066 aa15.81■□□□□ 0.12
AFF3-202ENST00000409236 TXNDC16Q9P2K2 825 aa15.81■□□□□ 0.12
AFF3-202ENST00000409236 CYLC1P35663 651 aaPredicted RBP15.81■□□□□ 0.12
AFF3-202ENST00000409236 CNNM3Q8NE01 707 aa15.81■□□□□ 0.12
AFF3-202ENST00000409236 SYNCQ9H7C4 482 aa15.81■□□□□ 0.12
AFF3-202ENST00000409236 ANKRD24Q8TF21 1146 aa15.81■□□□□ 0.12
AFF3-202ENST00000409236 VAV2P52735 878 aa15.81■□□□□ 0.12
AFF3-202ENST00000409236 OGFRQ9NZT2 677 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 BCAP29Q9UHQ4 241 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 CHD1LQ86WJ1 897 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 GBP5Q96PP8 586 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 RAPGEF4Q8WZA2 1011 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 VPS18Q9P253 973 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 MTRF1LQ9UGC7 380 aaKnown RBP15.8■□□□□ 0.12
AFF3-202ENST00000409236 SH3BP5O60239 455 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 TRAK1Q9UPV9 953 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 AP1ARQ63HQ0 302 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
AFF3-202ENST00000409236 MAP2K2P36507 400 aa15.79■□□□□ 0.12
AFF3-202ENST00000409236 SPAG5Q96R06 1193 aa15.79■□□□□ 0.12
AFF3-202ENST00000409236 SELENOSQ9BQE4 189 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms