RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
PTMA-202ENST00000409115 MEGF6O75095 1541 aa13.57□□□□□ -0.24
PTMA-202ENST00000409115 RCCD1A6NED2 376 aa13.56□□□□□ -0.24
PTMA-202ENST00000409115 TMC1Q8TDI8 760 aa13.56□□□□□ -0.24
PTMA-202ENST00000409115 FAM117AQ9C073 453 aa13.56□□□□□ -0.24
PTMA-202ENST00000409115 DNAJB2P25686 324 aa13.55□□□□□ -0.24
PTMA-202ENST00000409115 LTV1Q96GA3 475 aaPredicted RBP13.55□□□□□ -0.24
PTMA-202ENST00000409115 SLC12A5Q9H2X9 1139 aa13.55□□□□□ -0.24
PTMA-202ENST00000409115 RABGEF1Q9UJ41 708 aa13.55□□□□□ -0.24
PTMA-202ENST00000409115 SMAPO00193 183 aa13.54□□□□□ -0.24
PTMA-202ENST00000409115 MS4A1P11836 297 aa13.54□□□□□ -0.24
PTMA-202ENST00000409115 ARXQ96QS3 562 aa13.54□□□□□ -0.24
PTMA-202ENST00000409115 NSD2O96028 1365 aa13.54□□□□□ -0.24
PTMA-202ENST00000409115 UTRNP46939 3433 aa13.54□□□□□ -0.24
PTMA-202ENST00000409115 FBLN1P23142 703 aa13.53□□□□□ -0.24
PTMA-202ENST00000409115 PNPLA7Q6ZV29 1317 aa13.53□□□□□ -0.24
PTMA-202ENST00000409115 UBR3Q6ZT12 1888 aa13.53□□□□□ -0.24
PTMA-202ENST00000409115 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
PTMA-202ENST00000409115 CARD11Q9BXL7 1154 aa13.52□□□□□ -0.25
PTMA-202ENST00000409115 VPS9D1Q9Y2B5 631 aa13.52□□□□□ -0.25
PTMA-202ENST00000409115 MAP3K5Q99683 1374 aa13.52□□□□□ -0.25
PTMA-202ENST00000409115 PKD1L3Q7Z443 1732 aa13.52□□□□□ -0.25
PTMA-202ENST00000409115 SENP3-EIF4A1A0A087X0R7 540 aa13.51□□□□□ -0.25
PTMA-202ENST00000409115 HDGFL2Q7Z4V5 671 aaPredicted RBP13.51□□□□□ -0.25
PTMA-202ENST00000409115 FAM217BQ9NTX9 383 aaPredicted RBP13.51□□□□□ -0.25
PTMA-202ENST00000409115 SSTR3P32745 418 aaPredicted RBP13.5□□□□□ -0.25
PTMA-202ENST00000409115 NLGN2Q8NFZ4 835 aa13.5□□□□□ -0.25
PTMA-202ENST00000409115 SYTL4Q96C24 671 aaPredicted RBP13.5□□□□□ -0.25
PTMA-202ENST00000409115 SEPT9Q9UHD8 586 aaPredicted RBP13.5□□□□□ -0.25
PTMA-202ENST00000409115 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
PTMA-202ENST00000409115 TMEM134Q9H6X4 195 aa13.49□□□□□ -0.25
PTMA-202ENST00000409115 C4BP0C0L5 1744 aa13.49□□□□□ -0.25
PTMA-202ENST00000409115 ANKRD26Q9UPS8 1709 aa13.49□□□□□ -0.25
PTMA-202ENST00000409115 ANKRD36BQ8N2N9 1353 aa13.48□□□□□ -0.25
PTMA-202ENST00000409115 CDAN1Q8IWY9 1227 aa13.48□□□□□ -0.25
PTMA-202ENST00000409115 USHBP1Q8N6Y0 703 aa13.48□□□□□ -0.25
PTMA-202ENST00000409115 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
PTMA-202ENST00000409115 TK2O00142 265 aa13.47□□□□□ -0.25
PTMA-202ENST00000409115 LSM11P83369 360 aaKnown RBP eCLIP13.47□□□□□ -0.254e-17■■■■■ 28.3
PTMA-202ENST00000409115 GPR162Q16538 588 aa13.47□□□□□ -0.25
PTMA-202ENST00000409115 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
PTMA-202ENST00000409115 HOXC9P31274 260 aa13.46□□□□□ -0.25
PTMA-202ENST00000409115 MSL1Q68DK7 614 aa13.46□□□□□ -0.25
PTMA-202ENST00000409115 IP6K1Q92551 441 aa13.46□□□□□ -0.25
PTMA-202ENST00000409115 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
PTMA-202ENST00000409115 C1QTNF8P60827 252 aa13.45□□□□□ -0.26
PTMA-202ENST00000409115 SULF1Q8IWU6 871 aa13.45□□□□□ -0.26
PTMA-202ENST00000409115 BEGAINQ9BUH8 593 aa13.45□□□□□ -0.26
PTMA-202ENST00000409115 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
PTMA-202ENST00000409115 RRS1Q15050 365 aaKnown RBP13.44□□□□□ -0.26
PTMA-202ENST00000409115 TFCP2L1Q9NZI6 479 aa13.44□□□□□ -0.26
PTMA-202ENST00000409115 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
PTMA-202ENST00000409115 N4BP2Q86UW6 1770 aaPredicted RBP13.43□□□□□ -0.26
PTMA-202ENST00000409115 YBX3P16989 372 aaKnown RBP eCLIP13.43□□□□□ -0.263e-7■□□□□ 8.5
PTMA-202ENST00000409115 POLD1P28340 1107 aa13.43□□□□□ -0.26
PTMA-202ENST00000409115 AMPHP49418 695 aa13.43□□□□□ -0.26
PTMA-202ENST00000409115 SLC27A3Q5K4L6 730 aa13.43□□□□□ -0.26
PTMA-202ENST00000409115 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
PTMA-202ENST00000409115 TESK2Q96S53 571 aa13.43□□□□□ -0.26
PTMA-202ENST00000409115 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
PTMA-202ENST00000409115 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
PTMA-202ENST00000409115 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
PTMA-202ENST00000409115 DDX11L8A8MPP1 907 aa13.42□□□□□ -0.26
PTMA-202ENST00000409115 COG3Q96JB2 828 aa13.42□□□□□ -0.26
PTMA-202ENST00000409115 LAPTM4BQ86VI4 370 aa13.41□□□□□ -0.26
PTMA-202ENST00000409115 COL23A1Q86Y22 540 aaPredicted RBP13.41□□□□□ -0.26
PTMA-202ENST00000409115 ZCRB1Q8TBF4 217 aaKnown RBP13.41□□□□□ -0.26
PTMA-202ENST00000409115 USP47Q96K76 1375 aa13.41□□□□□ -0.26
PTMA-202ENST00000409115 C4AP0C0L4 1744 aa13.4□□□□□ -0.26
PTMA-202ENST00000409115 ST20-MTHFSA0A0A6YYL1 179 aa13.4□□□□□ -0.26
PTMA-202ENST00000409115 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
PTMA-202ENST00000409115 NBPF6Q5VWK0 638 aa13.4□□□□□ -0.26
PTMA-202ENST00000409115 SLC16A10Q8TF71 515 aa13.4□□□□□ -0.26
PTMA-202ENST00000409115 NBPF4Q96M43 638 aa13.4□□□□□ -0.26
PTMA-202ENST00000409115 GGNBP2Q9H3C7 697 aa13.4□□□□□ -0.26
PTMA-202ENST00000409115 WWC3Q9ULE0 1092 aa13.4□□□□□ -0.26
PTMA-202ENST00000409115 VIRMAQ69YN4 1812 aaKnown RBP13.4□□□□□ -0.26
PTMA-202ENST00000409115 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
PTMA-202ENST00000409115 ATP10DQ9P241 1426 aa13.39□□□□□ -0.27
PTMA-202ENST00000409115 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
PTMA-202ENST00000409115 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
PTMA-202ENST00000409115 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
PTMA-202ENST00000409115 SWT1Q5T5J6 900 aaKnown RBP13.39□□□□□ -0.27
PTMA-202ENST00000409115 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
PTMA-202ENST00000409115 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
PTMA-202ENST00000409115 PALLDQ8WX93 1383 aa13.39□□□□□ -0.27
PTMA-202ENST00000409115 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
PTMA-202ENST00000409115 BRCA1P38398 1863 aaKnown RBP13.38□□□□□ -0.27
PTMA-202ENST00000409115 CD46P15529 392 aa13.38□□□□□ -0.27
PTMA-202ENST00000409115 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
PTMA-202ENST00000409115 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
PTMA-202ENST00000409115 SLC4A3P48751 1232 aa13.37□□□□□ -0.27
PTMA-202ENST00000409115 RDH13Q8NBN7 331 aa13.37□□□□□ -0.27
PTMA-202ENST00000409115 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
PTMA-202ENST00000409115 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
PTMA-202ENST00000409115 HSP90AB2PQ58FF8 381 aa13.35□□□□□ -0.27
PTMA-202ENST00000409115 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
PTMA-202ENST00000409115 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
PTMA-202ENST00000409115 ADCY9O60503 1353 aa13.34□□□□□ -0.27
PTMA-202ENST00000409115 INSRP06213 1382 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms