RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
PTPN12-202ENST00000407343 TMCO4Q5TGY1 634 aa11.29□□□□□ -0.6
PTPN12-202ENST00000407343 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
PTPN12-202ENST00000407343 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
PTPN12-202ENST00000407343 STIM2Q9P246 746 aa11.29□□□□□ -0.6
PTPN12-202ENST00000407343 DMGDHQ9UI17 866 aaKnown RBP11.29□□□□□ -0.6
PTPN12-202ENST00000407343 GPC6Q9Y625 555 aaPredicted RBP11.29□□□□□ -0.6
PTPN12-202ENST00000407343 PTSQ03393 145 aa11.28□□□□□ -0.6
PTPN12-202ENST00000407343 NOM1Q5C9Z4 860 aaKnown RBP11.28□□□□□ -0.6
PTPN12-202ENST00000407343 ZNF280CQ8ND82 737 aa11.28□□□□□ -0.6
PTPN12-202ENST00000407343 CRISPLD1Q9H336 500 aa11.28□□□□□ -0.6
PTPN12-202ENST00000407343 POTECB2RU33 542 aa11.27□□□□□ -0.61
PTPN12-202ENST00000407343 GLYCTKQ8IVS8 523 aa11.27□□□□□ -0.61
PTPN12-202ENST00000407343 RHPN1Q8TCX5 695 aa11.27□□□□□ -0.61
PTPN12-202ENST00000407343 HSH2DQ96JZ2 352 aa11.27□□□□□ -0.61
PTPN12-202ENST00000407343 SUSD3Q96L08 255 aa11.26□□□□□ -0.61
PTPN12-202ENST00000407343 F11P03951 625 aa11.25□□□□□ -0.61
PTPN12-202ENST00000407343 TATP17735 454 aaPredicted RBP11.25□□□□□ -0.61
PTPN12-202ENST00000407343 MFAP1P55081 439 aaKnown RBP11.25□□□□□ -0.61
PTPN12-202ENST00000407343 UBAP2LQ14157 1087 aaKnown RBP11.25□□□□□ -0.61
PTPN12-202ENST00000407343 IFT43Q96FT9 208 aa11.25□□□□□ -0.61
PTPN12-202ENST00000407343 GPAMQ9HCL2 828 aa11.25□□□□□ -0.61
PTPN12-202ENST00000407343 CUEDC1Q9NWM3 386 aaPredicted RBP11.25□□□□□ -0.61
PTPN12-202ENST00000407343 TGFBR3LH3BV60 316 aa11.24□□□□□ -0.61
PTPN12-202ENST00000407343 FAM13AO94988 1023 aa11.24□□□□□ -0.61
PTPN12-202ENST00000407343 BRD2P25440 801 aaKnown RBP11.24□□□□□ -0.61
PTPN12-202ENST00000407343 EIF1AXP47813 144 aaKnown RBP11.24□□□□□ -0.61
PTPN12-202ENST00000407343 RUBCNLQ9H714 662 aa11.24□□□□□ -0.61
PTPN12-202ENST00000407343 A0A1W2PNR3 127 aa11.23□□□□□ -0.61
PTPN12-202ENST00000407343 FZD6O60353 706 aa11.23□□□□□ -0.61
PTPN12-202ENST00000407343 IER5Q5VY09 327 aa11.23□□□□□ -0.61
PTPN12-202ENST00000407343 DNAJC14Q6Y2X3 702 aaPredicted RBP11.23□□□□□ -0.61
PTPN12-202ENST00000407343 CCDC27Q2M243 656 aa11.22□□□□□ -0.61
PTPN12-202ENST00000407343 ATCAYQ86WG3 371 aa11.22□□□□□ -0.61
PTPN12-202ENST00000407343 GRNP28799 593 aaKnown RBP11.21□□□□□ -0.61
PTPN12-202ENST00000407343 TREML1Q86YW5 311 aa11.21□□□□□ -0.61
PTPN12-202ENST00000407343 CCDC155Q8N6L0 562 aa11.21□□□□□ -0.61
PTPN12-202ENST00000407343 ABTB2Q8N961 1025 aa11.21□□□□□ -0.61
PTPN12-202ENST00000407343 GAS2L1Q99501 681 aaPredicted RBP11.21□□□□□ -0.61
PTPN12-202ENST00000407343 BIN2Q9UBW5 565 aaPredicted RBP11.21□□□□□ -0.61
PTPN12-202ENST00000407343 OPLAHO14841 1288 aa11.2□□□□□ -0.62
PTPN12-202ENST00000407343 ARSJQ5FYB0 599 aaPredicted RBP11.2□□□□□ -0.62
PTPN12-202ENST00000407343 LRRC69Q6ZNQ3 347 aa11.2□□□□□ -0.62
PTPN12-202ENST00000407343 BICDL1Q6ZP65 573 aa11.2□□□□□ -0.62
PTPN12-202ENST00000407343 RGS22Q8NE09 1264 aa11.2□□□□□ -0.62
PTPN12-202ENST00000407343 HCN2Q9UL51 889 aa11.2□□□□□ -0.62
PTPN12-202ENST00000407343 IGHA2P01877 340 aa11.19□□□□□ -0.62
PTPN12-202ENST00000407343 CCDC87Q9NVE4 849 aa11.19□□□□□ -0.62
PTPN12-202ENST00000407343 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
PTPN12-202ENST00000407343 C11orf95C9JLR9 678 aaPredicted RBP11.18□□□□□ -0.62
PTPN12-202ENST00000407343 MICAL2O94851 1124 aa11.18□□□□□ -0.62
PTPN12-202ENST00000407343 INPP5BP32019 993 aa11.18□□□□□ -0.62
PTPN12-202ENST00000407343 ZAP70P43403 619 aa11.18□□□□□ -0.62
PTPN12-202ENST00000407343 TYRO3Q06418 890 aa11.18□□□□□ -0.62
PTPN12-202ENST00000407343 DBN1Q16643 649 aa11.18□□□□□ -0.62
PTPN12-202ENST00000407343 HIF1AQ16665 826 aa11.18□□□□□ -0.62
PTPN12-202ENST00000407343 SAMD5Q5TGI4 173 aa11.18□□□□□ -0.62
PTPN12-202ENST00000407343 BTLAQ7Z6A9 289 aa11.18□□□□□ -0.62
PTPN12-202ENST00000407343 NLRP8Q86W28 1048 aa11.18□□□□□ -0.62
PTPN12-202ENST00000407343 ITGA6P23229 1130 aa11.16□□□□□ -0.62
PTPN12-202ENST00000407343 IDH3AP50213 366 aa11.16□□□□□ -0.62
PTPN12-202ENST00000407343 MARSP56192 900 aaKnown RBP11.16□□□□□ -0.62
PTPN12-202ENST00000407343 LBRQ14739 615 aaKnown RBP11.16□□□□□ -0.62
PTPN12-202ENST00000407343 ALKBH2Q6NS38 261 aa11.16□□□□□ -0.62
PTPN12-202ENST00000407343 NDFIP2Q9NV92 336 aa11.16□□□□□ -0.62
PTPN12-202ENST00000407343 ANKIB1Q9P2G1 1089 aa11.16□□□□□ -0.62
PTPN12-202ENST00000407343 DCTN4Q9UJW0 460 aa11.16□□□□□ -0.62
PTPN12-202ENST00000407343 TRIM22Q8IYM9 498 aa11.15□□□□□ -0.62
PTPN12-202ENST00000407343 ZNF837Q96EG3 531 aaPredicted RBP11.15□□□□□ -0.62
PTPN12-202ENST00000407343 ZCCHC2Q9C0B9 1178 aaKnown RBP11.15□□□□□ -0.62
PTPN12-202ENST00000407343 EFSO43281 561 aa11.14□□□□□ -0.63
PTPN12-202ENST00000407343 PPFIA3O75145 1194 aa11.14□□□□□ -0.63
PTPN12-202ENST00000407343 RIPOR1Q6ZS17 1223 aa11.14□□□□□ -0.63
PTPN12-202ENST00000407343 RBCK1Q9BYM8 510 aa11.14□□□□□ -0.63
PTPN12-202ENST00000407343 PDGFAP04085 211 aa11.13□□□□□ -0.63
PTPN12-202ENST00000407343 GJD3Q8N144 294 aa11.13□□□□□ -0.63
PTPN12-202ENST00000407343 PGBD3Q8N328 593 aa11.13□□□□□ -0.63
PTPN12-202ENST00000407343 EDEM1Q92611 657 aa11.13□□□□□ -0.63
PTPN12-202ENST00000407343 NUCKS1Q9H1E3 243 aaKnown RBP11.13□□□□□ -0.63
PTPN12-202ENST00000407343 POLIQ9UNA4 740 aa11.13□□□□□ -0.63
PTPN12-202ENST00000407343 USP20Q9Y2K6 914 aa11.13□□□□□ -0.63
PTPN12-202ENST00000407343 MZF1P28698 734 aaPredicted RBP11.12□□□□□ -0.63
PTPN12-202ENST00000407343 ASB16Q96NS5 453 aa11.12□□□□□ -0.63
PTPN12-202ENST00000407343 FAM129BQ96TA1 746 aa11.12□□□□□ -0.63
PTPN12-202ENST00000407343 FAM157BP0CG42 384 aa11.11□□□□□ -0.63
PTPN12-202ENST00000407343 MAPK1P28482 360 aa11.11□□□□□ -0.63
PTPN12-202ENST00000407343 ARSDP51689 593 aa11.11□□□□□ -0.63
PTPN12-202ENST00000407343 TRIP4Q15650 581 aaPredicted RBP11.11□□□□□ -0.63
PTPN12-202ENST00000407343 EFHC2Q5JST6 749 aa11.11□□□□□ -0.63
PTPN12-202ENST00000407343 GPR152Q8TDT2 470 aa11.11□□□□□ -0.63
PTPN12-202ENST00000407343 KCNMB2Q9Y691 235 aa11.11□□□□□ -0.63
PTPN12-202ENST00000407343 TMC7Q7Z402 723 aa11.1□□□□□ -0.63
PTPN12-202ENST00000407343 NPAS4Q8IUM7 802 aa11.1□□□□□ -0.63
PTPN12-202ENST00000407343 RGL4Q8IZJ4 473 aa11.1□□□□□ -0.63
PTPN12-202ENST00000407343 GGNBP2Q9H3C7 697 aa11.1□□□□□ -0.63
PTPN12-202ENST00000407343 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
PTPN12-202ENST00000407343 BNIP3LO60238 219 aa11.09□□□□□ -0.63
PTPN12-202ENST00000407343 KCNQ4P56696 695 aa11.09□□□□□ -0.63
PTPN12-202ENST00000407343 DNM1Q05193 864 aaKnown RBP11.09□□□□□ -0.63
PTPN12-202ENST00000407343 TNP2Q05952 138 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms