RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 TRIM6-TRIM34B2RNG4 842 aa30.26■■■□□ 2.43
DNMT3A-206ENST00000406659 NBPF26B4DH59 902 aa30.26■■■□□ 2.43
DNMT3A-206ENST00000406659 NBPF14Q5TI25 921 aa30.26■■■□□ 2.43
DNMT3A-206ENST00000406659 NBPF10Q6P3W6 841 aaKnown RBP30.26■■■□□ 2.43
DNMT3A-206ENST00000406659 NBPF15Q8N660 670 aa30.26■■■□□ 2.43
DNMT3A-206ENST00000406659 SLKQ9H2G2 1235 aaPredicted RBP30.26■■■□□ 2.43
DNMT3A-206ENST00000406659 TNS2Q63HR2 1409 aa30.25■■■□□ 2.43
DNMT3A-206ENST00000406659 REC8O95072 547 aa30.25■■■□□ 2.43
DNMT3A-206ENST00000406659 ERC2O15083 957 aa30.24■■■□□ 2.43
DNMT3A-206ENST00000406659 RILPL2Q969X0 211 aa30.24■■■□□ 2.43
DNMT3A-206ENST00000406659 COL16A1Q07092 1604 aaPredicted RBP30.24■■■□□ 2.43
DNMT3A-206ENST00000406659 DISP2A7MBM2 1401 aa30.23■■■□□ 2.43
DNMT3A-206ENST00000406659 PA2G4Q9UQ80 394 aaKnown RBP30.23■■■□□ 2.43
DNMT3A-206ENST00000406659 TOGARAM1Q9Y4F4 1720 aa30.23■■■□□ 2.43
DNMT3A-206ENST00000406659 TUBGCP6Q96RT7 1819 aa30.22■■■□□ 2.43
DNMT3A-206ENST00000406659 A1BGP04217 495 aa30.22■■■□□ 2.43
DNMT3A-206ENST00000406659 ARFGEF2Q9Y6D5 1785 aa30.22■■■□□ 2.43
DNMT3A-206ENST00000406659 NFKBIBQ15653 356 aa30.21■■■□□ 2.43
DNMT3A-206ENST00000406659 CLASRPQ8N2M8 674 aaKnown RBP30.21■■■□□ 2.43
DNMT3A-206ENST00000406659 ATP5J2-PTCD1G3V325 749 aa30.2■■■□□ 2.42
DNMT3A-206ENST00000406659 G3BP1Q13283 466 aaKnown RBP eCLIP30.2■■■□□ 2.42
DNMT3A-206ENST00000406659 EXOC5O00471 708 aa30.19■■■□□ 2.42
DNMT3A-206ENST00000406659 PIGBQ92521 554 aa30.19■■■□□ 2.42
DNMT3A-206ENST00000406659 ANTXR1Q9H6X2 564 aa30.19■■■□□ 2.42
DNMT3A-206ENST00000406659 AFDNP55196 1824 aaKnown RBP30.19■■■□□ 2.42
DNMT3A-206ENST00000406659 PHLPP1O60346 1717 aa30.19■■■□□ 2.42
DNMT3A-206ENST00000406659 SPRYD3Q8NCJ5 442 aa30.18■■■□□ 2.42
DNMT3A-206ENST00000406659 TTLL7Q6ZT98 887 aa30.18■■■□□ 2.42
DNMT3A-206ENST00000406659 CHMLP26374 656 aa30.17■■■□□ 2.42
DNMT3A-206ENST00000406659 PI4K2BQ8TCG2 481 aa30.17■■■□□ 2.42
DNMT3A-206ENST00000406659 TEX13AQ9BXU3 409 aaPredicted RBP30.17■■■□□ 2.42
DNMT3A-206ENST00000406659 USP42Q9H9J4 1324 aaKnown RBP30.16■■■□□ 2.42
DNMT3A-206ENST00000406659 A0A087WZG4 1122 aa30.16■■■□□ 2.42
DNMT3A-206ENST00000406659 ADAMTS2O95450 1211 aa30.16■■■□□ 2.42
DNMT3A-206ENST00000406659 UBE3BQ7Z3V4 1068 aa30.16■■■□□ 2.42
DNMT3A-206ENST00000406659 ESYT1Q9BSJ8 1104 aa30.16■■■□□ 2.42
DNMT3A-206ENST00000406659 ASAP1Q9ULH1 1129 aa30.16■■■□□ 2.42
DNMT3A-206ENST00000406659 TTC41PQ6P2S7 1318 aa30.16■■■□□ 2.42
DNMT3A-206ENST00000406659 EPHA10Q5JZY3 1008 aa30.15■■■□□ 2.42
DNMT3A-206ENST00000406659 JARID2Q92833 1246 aaPredicted RBP30.15■■■□□ 2.42
DNMT3A-206ENST00000406659 PLCH1Q4KWH8 1693 aa30.15■■■□□ 2.42
DNMT3A-206ENST00000406659 IFIT2P09913 472 aaKnown RBP30.15■■■□□ 2.42
DNMT3A-206ENST00000406659 RABEP1Q15276 862 aa30.15■■■□□ 2.42
DNMT3A-206ENST00000406659 UNC5CLQ8IV45 518 aa30.15■■■□□ 2.42
DNMT3A-206ENST00000406659 VSIG10Q8N0Z9 540 aa30.15■■■□□ 2.42
DNMT3A-206ENST00000406659 GPATCH3Q96I76 525 aa30.15■■■□□ 2.42
DNMT3A-206ENST00000406659 RBM42Q9BTD8 480 aaKnown RBP30.14■■■□□ 2.42
DNMT3A-206ENST00000406659 ATG3Q9NT62 314 aa30.14■■■□□ 2.42
DNMT3A-206ENST00000406659 COL15A1P39059 1388 aa30.14■■■□□ 2.42
DNMT3A-206ENST00000406659 GLRX3O76003 335 aaKnown RBP30.12■■■□□ 2.41
DNMT3A-206ENST00000406659 CNTROBQ8N137 903 aa30.12■■■□□ 2.41
DNMT3A-206ENST00000406659 TOM1O60784 492 aa30.11■■■□□ 2.41
DNMT3A-206ENST00000406659 MAP4K4O95819 1239 aaPredicted RBP30.11■■■□□ 2.41
DNMT3A-206ENST00000406659 AACSQ86V21 672 aa30.11■■■□□ 2.41
DNMT3A-206ENST00000406659 CDCA7Q9BWT1 371 aaPredicted RBP30.11■■■□□ 2.41
DNMT3A-206ENST00000406659 SIL1Q9H173 461 aa30.11■■■□□ 2.41
DNMT3A-206ENST00000406659 CWC25Q9NXE8 425 aaPredicted RBP30.11■■■□□ 2.41
DNMT3A-206ENST00000406659 ITGB4P16144 1822 aa30.11■■■□□ 2.41
DNMT3A-206ENST00000406659 SASH1O94885 1247 aa30.1■■■□□ 2.41
DNMT3A-206ENST00000406659 PIP4K2BP78356 416 aa30.1■■■□□ 2.41
DNMT3A-206ENST00000406659 ZBTB3Q9H5J0 574 aa30.1■■■□□ 2.41
DNMT3A-206ENST00000406659 ECHDC1Q9NTX5 307 aa30.1■■■□□ 2.41
DNMT3A-206ENST00000406659 STARD3NLO95772 234 aa30.1■■■□□ 2.41
DNMT3A-206ENST00000406659 DNAJC10Q8IXB1 793 aa30.1■■■□□ 2.41
DNMT3A-206ENST00000406659 NUP188Q5SRE5 1749 aa30.09■■■□□ 2.41
DNMT3A-206ENST00000406659 H7C1W4 665 aa30.09■■■□□ 2.41
DNMT3A-206ENST00000406659 CASP7P55210 303 aa30.09■■■□□ 2.41
DNMT3A-206ENST00000406659 RABL6Q3YEC7 729 aaPredicted RBP30.09■■■□□ 2.41
DNMT3A-206ENST00000406659 NUTM2BA6NNL0 878 aaPredicted RBP30.08■■■□□ 2.41
DNMT3A-206ENST00000406659 NUTM2EB1AL46 878 aaPredicted RBP30.08■■■□□ 2.41
DNMT3A-206ENST00000406659 NUTM2AQ8IVF1 878 aaPredicted RBP30.08■■■□□ 2.41
DNMT3A-206ENST00000406659 LRP6O75581 1613 aa30.08■■■□□ 2.41
DNMT3A-206ENST00000406659 BCL9O00512 1426 aa30.08■■■□□ 2.41
DNMT3A-206ENST00000406659 K7ELQ4 463 aaPredicted RBP30.08■■■□□ 2.41
DNMT3A-206ENST00000406659 COPRSQ9NQ92 184 aa30.08■■■□□ 2.41
DNMT3A-206ENST00000406659 CHMP5Q9NZZ3 219 aa30.08■■■□□ 2.41
DNMT3A-206ENST00000406659 THRAP3Q9Y2W1 955 aaKnown RBP30.08■■■□□ 2.41
DNMT3A-206ENST00000406659 WNK3Q9BYP7 1800 aa30.07■■■□□ 2.4
DNMT3A-206ENST00000406659 CCDC191Q8NCU4 936 aa30.07■■■□□ 2.4
DNMT3A-206ENST00000406659 KLHDC4Q8TBB5 520 aa30.07■■■□□ 2.4
DNMT3A-206ENST00000406659 AK9Q5TCS8 1911 aa30.07■■■□□ 2.4
DNMT3A-206ENST00000406659 SPATA31A1Q5TZJ5 1347 aa30.07■■■□□ 2.4
DNMT3A-206ENST00000406659 FRAT2O75474 233 aaPredicted RBP30.06■■■□□ 2.4
DNMT3A-206ENST00000406659 CD2BP2O95400 341 aaKnown RBP30.06■■■□□ 2.4
DNMT3A-206ENST00000406659 MCCP23508 829 aa30.05■■■□□ 2.4
DNMT3A-206ENST00000406659 SYTL4Q96C24 671 aaPredicted RBP30.05■■■□□ 2.4
DNMT3A-206ENST00000406659 ZNF330Q9Y3S2 320 aaPredicted RBP30.05■■■□□ 2.4
DNMT3A-206ENST00000406659 RFX5P48382 616 aaPredicted RBP30.05■■■□□ 2.4
DNMT3A-206ENST00000406659 ANO2Q9NQ90 1003 aa30.05■■■□□ 2.4
DNMT3A-206ENST00000406659 EAF2Q96CJ1 260 aaPredicted RBP30.04■■■□□ 2.4
DNMT3A-206ENST00000406659 KIF6Q6ZMV9 814 aa30.03■■■□□ 2.4
DNMT3A-206ENST00000406659 HSP90AA1P07900 732 aaKnown RBP30.03■■■□□ 2.4
DNMT3A-206ENST00000406659 PTPN12Q05209 780 aaKnown RBP30.03■■■□□ 2.4
DNMT3A-206ENST00000406659 LMBR1LQ6UX01 489 aa30.03■■■□□ 2.4
DNMT3A-206ENST00000406659 CCDC8Q9H0W5 538 aaPredicted RBP30.03■■■□□ 2.4
DNMT3A-206ENST00000406659 NRAPQ86VF7 1730 aa30.02■■■□□ 2.4
DNMT3A-206ENST00000406659 KAT6BQ8WYB5 2073 aa30.02■■■□□ 2.4
DNMT3A-206ENST00000406659 FOXO4P98177 505 aa30.02■■■□□ 2.4
DNMT3A-206ENST00000406659 DDB1Q16531 1140 aa30.02■■■□□ 2.4
DNMT3A-206ENST00000406659 PRIM1P49642 420 aaKnown RBP30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms