RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 MSNP26038 577 aaKnown RBP16.45■□□□□ 0.22
PMS2-204ENST00000406569 AK2P54819 239 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 NOL8Q76FK4 1167 aaKnown RBP16.45■□□□□ 0.22
PMS2-204ENST00000406569 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 TSPY26PQ9H489 355 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 ECHDC1Q9NTX5 307 aa16.45■□□□□ 0.22
PMS2-204ENST00000406569 MRC1P22897 1456 aa16.44■□□□□ 0.22
PMS2-204ENST00000406569 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
PMS2-204ENST00000406569 USP48Q86UV5 1035 aa16.44■□□□□ 0.22
PMS2-204ENST00000406569 CLASRPQ8N2M8 674 aaKnown RBP16.44■□□□□ 0.22
PMS2-204ENST00000406569 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.44■□□□□ 0.22
PMS2-204ENST00000406569 ZSCAN22P10073 491 aaPredicted RBP16.43■□□□□ 0.22
PMS2-204ENST00000406569 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.43■□□□□ 0.22
PMS2-204ENST00000406569 ZKSCAN5Q9Y2L8 839 aa16.43■□□□□ 0.22
PMS2-204ENST00000406569 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
PMS2-204ENST00000406569 GADD45BO75293 160 aaPredicted RBP16.42■□□□□ 0.22
PMS2-204ENST00000406569 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 ANKLE2Q86XL3 938 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 LRRC59Q96AG4 307 aaKnown RBP16.42■□□□□ 0.22
PMS2-204ENST00000406569 HYPKQ9NX55 129 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 CCDC39Q9UFE4 941 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 ANXA1P04083 346 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 PSME1Q06323 249 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 LINS1Q8NG48 757 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 GPATCH3Q96I76 525 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 ZSCAN31Q96LW9 406 aaPredicted RBP16.42■□□□□ 0.22
PMS2-204ENST00000406569 ZSWIM6Q9HCJ5 1215 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 DIAPH3Q9NSV4 1193 aa16.42■□□□□ 0.22
PMS2-204ENST00000406569 ABCC6O95255 1503 aa16.41■□□□□ 0.22
PMS2-204ENST00000406569 C1orf141Q5JVX7 400 aa16.41■□□□□ 0.22
PMS2-204ENST00000406569 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
PMS2-204ENST00000406569 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
PMS2-204ENST00000406569 EVI5LQ96CN4 794 aa16.41■□□□□ 0.22
PMS2-204ENST00000406569 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
PMS2-204ENST00000406569 RGPD5Q99666 1765 aa16.41■□□□□ 0.22
PMS2-204ENST00000406569 STX6O43752 255 aa16.4■□□□□ 0.22
PMS2-204ENST00000406569 RRP9O43818 475 aaKnown RBP16.4■□□□□ 0.22
PMS2-204ENST00000406569 GCP02774 474 aa16.4■□□□□ 0.22
PMS2-204ENST00000406569 SYT1P21579 422 aa16.4■□□□□ 0.22
PMS2-204ENST00000406569 OS9Q13438 667 aaPredicted RBP16.4■□□□□ 0.22
PMS2-204ENST00000406569 NECTIN1Q15223 517 aa16.4■□□□□ 0.22
PMS2-204ENST00000406569 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
PMS2-204ENST00000406569 C9orf78Q9NZ63 289 aaPredicted RBP16.4■□□□□ 0.22
PMS2-204ENST00000406569 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
PMS2-204ENST00000406569 C5P01031 1676 aa16.4■□□□□ 0.22
PMS2-204ENST00000406569 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
PMS2-204ENST00000406569 HIP1O00291 1037 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 LETM1O95202 739 aaPredicted RBP16.39■□□□□ 0.21
PMS2-204ENST00000406569 F13A1P00488 732 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 PTH1RQ03431 593 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 CCDC183Q5T5S1 534 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 KAZALD1Q96I82 304 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
PMS2-204ENST00000406569 ATP6V1DQ9Y5K8 247 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 JCADQ9P266 1359 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 CCDC171Q6TFL3 1326 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 GRM8O00222 908 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 UBE2HP62256 183 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 UBE2Q2Q8WVN8 375 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 SMC3Q9UQE7 1217 aa16.39■□□□□ 0.21
PMS2-204ENST00000406569 PLEKHG2Q9H7P9 1386 aa16.38■□□□□ 0.21
PMS2-204ENST00000406569 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
PMS2-204ENST00000406569 CASTP20810 708 aaKnown RBP16.38■□□□□ 0.21
PMS2-204ENST00000406569 ANKRD24Q8TF21 1146 aa16.38■□□□□ 0.21
PMS2-204ENST00000406569 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
PMS2-204ENST00000406569 SASH1O94885 1247 aa16.37■□□□□ 0.21
PMS2-204ENST00000406569 IFIT2P09913 472 aaKnown RBP16.37■□□□□ 0.21
PMS2-204ENST00000406569 PRKCSHP14314 528 aaPredicted RBP16.37■□□□□ 0.21
PMS2-204ENST00000406569 PDIA6Q15084 440 aa16.37■□□□□ 0.21
PMS2-204ENST00000406569 SUCLG2Q96I99 432 aa16.37■□□□□ 0.21
PMS2-204ENST00000406569 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
PMS2-204ENST00000406569 GDPD2Q9HCC8 539 aa16.37■□□□□ 0.21
PMS2-204ENST00000406569 PDRG1Q9NUG6 133 aa16.37■□□□□ 0.21
PMS2-204ENST00000406569 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
PMS2-204ENST00000406569 LARGE1O95461 756 aa16.36■□□□□ 0.21
PMS2-204ENST00000406569 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
PMS2-204ENST00000406569 CSPP1Q1MSJ5 1256 aa16.36■□□□□ 0.21
PMS2-204ENST00000406569 MAP4K1Q92918 833 aa16.36■□□□□ 0.21
PMS2-204ENST00000406569 CNPY2Q9Y2B0 182 aa16.36■□□□□ 0.21
PMS2-204ENST00000406569 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
PMS2-204ENST00000406569 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
PMS2-204ENST00000406569 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
PMS2-204ENST00000406569 ADCK5Q3MIX3 580 aa16.36■□□□□ 0.21
PMS2-204ENST00000406569 PRPF40BQ6NWY9 871 aaKnown RBP16.36■□□□□ 0.21
PMS2-204ENST00000406569 AACSQ86V21 672 aa16.36■□□□□ 0.21
PMS2-204ENST00000406569 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
PMS2-204ENST00000406569 MTMR6Q9Y217 621 aa16.36■□□□□ 0.21
PMS2-204ENST00000406569 COL15A1P39059 1388 aa16.35■□□□□ 0.21
PMS2-204ENST00000406569 MED23Q9ULK4 1368 aa16.35■□□□□ 0.21
PMS2-204ENST00000406569 CREB3L3Q68CJ9 461 aa16.34■□□□□ 0.21
PMS2-204ENST00000406569 RNF214Q8ND24 703 aa16.34■□□□□ 0.21
PMS2-204ENST00000406569 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
PMS2-204ENST00000406569 RBM8AQ9Y5S9 174 aaKnown RBP16.34■□□□□ 0.21
PMS2-204ENST00000406569 NPHP4O75161 1426 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms