RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 CLASRPQ8N2M8 674 aaKnown RBP22.23■■□□□ 1.15
EWSR1-207ENST00000406548 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.23■■□□□ 1.15
EWSR1-207ENST00000406548 NCAPD2Q15021 1401 aa22.23■■□□□ 1.15
EWSR1-207ENST00000406548 ZSCAN22P10073 491 aaPredicted RBP22.22■■□□□ 1.15
EWSR1-207ENST00000406548 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
EWSR1-207ENST00000406548 KCNH5Q8NCM2 988 aa22.22■■□□□ 1.15
EWSR1-207ENST00000406548 RUFY2Q8WXA3 655 aa22.22■■□□□ 1.15
EWSR1-207ENST00000406548 ZBTB7CA1YPR0 619 aa22.22■■□□□ 1.15
EWSR1-207ENST00000406548 MPRIPQ6WCQ1 1025 aa22.22■■□□□ 1.15
EWSR1-207ENST00000406548 PXDNQ92626 1479 aa22.22■■□□□ 1.15
EWSR1-207ENST00000406548 ALDH1L1O75891 902 aa22.21■■□□□ 1.15
EWSR1-207ENST00000406548 LRRC59Q96AG4 307 aaKnown RBP22.21■■□□□ 1.15
EWSR1-207ENST00000406548 OVOS2A0A0G2JMS6 1433 aa22.21■■□□□ 1.15
EWSR1-207ENST00000406548 CASTP20810 708 aaKnown RBP22.21■■□□□ 1.15
EWSR1-207ENST00000406548 ECHDC1Q9NTX5 307 aa22.21■■□□□ 1.15
EWSR1-207ENST00000406548 MAP3K2Q9Y2U5 619 aa22.21■■□□□ 1.15
EWSR1-207ENST00000406548 STX6O43752 255 aa22.2■■□□□ 1.14
EWSR1-207ENST00000406548 GPATCH3Q96I76 525 aa22.2■■□□□ 1.14
EWSR1-207ENST00000406548 C9orf78Q9NZ63 289 aaPredicted RBP22.2■■□□□ 1.14
EWSR1-207ENST00000406548 CNPY2Q9Y2B0 182 aa22.2■■□□□ 1.14
EWSR1-207ENST00000406548 RNMTO43148 476 aaKnown RBP22.19■■□□□ 1.14
EWSR1-207ENST00000406548 SYT1P21579 422 aa22.19■■□□□ 1.14
EWSR1-207ENST00000406548 TERF1P54274 439 aa22.19■■□□□ 1.14
EWSR1-207ENST00000406548 AMOTQ4VCS5 1084 aa22.19■■□□□ 1.14
EWSR1-207ENST00000406548 ANKLE2Q86XL3 938 aa22.19■■□□□ 1.14
EWSR1-207ENST00000406548 ERC1Q8IUD2 1116 aa22.19■■□□□ 1.14
EWSR1-207ENST00000406548 SMC3Q9UQE7 1217 aa22.19■■□□□ 1.14
EWSR1-207ENST00000406548 LARP6Q9BRS8 491 aaKnown RBP22.19■■□□□ 1.14
EWSR1-207ENST00000406548 CCDC183Q5T5S1 534 aa22.18■■□□□ 1.14
EWSR1-207ENST00000406548 HYPKQ9NX55 129 aa22.18■■□□□ 1.14
EWSR1-207ENST00000406548 F13A1P00488 732 aa22.18■■□□□ 1.14
EWSR1-207ENST00000406548 XPCQ01831 940 aaPredicted RBP22.18■■□□□ 1.14
EWSR1-207ENST00000406548 PTH1RQ03431 593 aa22.18■■□□□ 1.14
EWSR1-207ENST00000406548 PSME1Q06323 249 aa22.18■■□□□ 1.14
EWSR1-207ENST00000406548 C1orf141Q5JVX7 400 aa22.18■■□□□ 1.14
EWSR1-207ENST00000406548 KSR2Q6VAB6 950 aa22.18■■□□□ 1.14
EWSR1-207ENST00000406548 HDAC5Q9UQL6 1122 aa22.18■■□□□ 1.14
EWSR1-207ENST00000406548 IFIT2P09913 472 aaKnown RBP22.17■■□□□ 1.14
EWSR1-207ENST00000406548 CPA1P15085 419 aa22.17■■□□□ 1.14
EWSR1-207ENST00000406548 PROSER3Q2NL68 480 aa22.17■■□□□ 1.14
EWSR1-207ENST00000406548 FAM184AQ8NB25 1140 aa22.17■■□□□ 1.14
EWSR1-207ENST00000406548 HEG1Q9ULI3 1381 aa22.17■■□□□ 1.14
EWSR1-207ENST00000406548 GIGYF1O75420 1035 aaPredicted RBP22.16■■□□□ 1.14
EWSR1-207ENST00000406548 LARGE1O95461 756 aa22.16■■□□□ 1.14
EWSR1-207ENST00000406548 VPS53Q5VIR6 699 aa22.16■■□□□ 1.14
EWSR1-207ENST00000406548 PA2G4Q9UQ80 394 aaKnown RBP22.16■■□□□ 1.14
EWSR1-207ENST00000406548 ATP6V1DQ9Y5K8 247 aa22.16■■□□□ 1.14
EWSR1-207ENST00000406548 UBE2HP62256 183 aa22.16■■□□□ 1.14
EWSR1-207ENST00000406548 ESCO1Q5FWF5 840 aa22.16■■□□□ 1.14
EWSR1-207ENST00000406548 PRPF40BQ6NWY9 871 aaKnown RBP22.16■■□□□ 1.14
EWSR1-207ENST00000406548 KCNB2Q92953 911 aa22.16■■□□□ 1.14
EWSR1-207ENST00000406548 JAKMIP1Q96N16 626 aaKnown RBP22.16■■□□□ 1.14
EWSR1-207ENST00000406548 EVI5LQ96CN4 794 aa22.15■■□□□ 1.14
EWSR1-207ENST00000406548 TM6SF1Q9BZW5 370 aa22.15■■□□□ 1.14
EWSR1-207ENST00000406548 PDRG1Q9NUG6 133 aa22.15■■□□□ 1.14
EWSR1-207ENST00000406548 SIPA1L3O60292 1781 aaPredicted RBP22.15■■□□□ 1.14
EWSR1-207ENST00000406548 CSPP1Q1MSJ5 1256 aa22.15■■□□□ 1.14
EWSR1-207ENST00000406548 CWF19L2Q2TBE0 894 aaKnown RBP22.15■■□□□ 1.14
EWSR1-207ENST00000406548 UVSSAQ2YD98 709 aa22.14■■□□□ 1.14
EWSR1-207ENST00000406548 ADCK5Q3MIX3 580 aa22.14■■□□□ 1.14
EWSR1-207ENST00000406548 AACSQ86V21 672 aa22.14■■□□□ 1.14
EWSR1-207ENST00000406548 CCDC83Q8IWF9 413 aa22.14■■□□□ 1.14
EWSR1-207ENST00000406548 ZSCAN31Q96LW9 406 aaPredicted RBP22.14■■□□□ 1.14
EWSR1-207ENST00000406548 ZSWIM6Q9HCJ5 1215 aa22.14■■□□□ 1.14
EWSR1-207ENST00000406548 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.13
EWSR1-207ENST00000406548 RBM33Q96EV2 1170 aaKnown RBP22.14■■□□□ 1.13
EWSR1-207ENST00000406548 SH2B1Q9NRF2 756 aaPredicted RBP22.14■■□□□ 1.13
EWSR1-207ENST00000406548 R3HCC1Q9Y3T6 440 aaKnown RBP22.14■■□□□ 1.13
EWSR1-207ENST00000406548 CYP46A1Q9Y6A2 500 aa22.14■■□□□ 1.13
EWSR1-207ENST00000406548 CCDC171Q6TFL3 1326 aa22.13■■□□□ 1.13
EWSR1-207ENST00000406548 LETM1O95202 739 aaPredicted RBP22.13■■□□□ 1.13
EWSR1-207ENST00000406548 PTMAP06454 111 aaKnown RBP22.13■■□□□ 1.13
EWSR1-207ENST00000406548 GJB2P29033 226 aa22.13■■□□□ 1.13
EWSR1-207ENST00000406548 SLIT3O75094 1523 aa22.13■■□□□ 1.13
EWSR1-207ENST00000406548 FIBPO43427 364 aa22.12■■□□□ 1.13
EWSR1-207ENST00000406548 NECTIN1Q15223 517 aa22.12■■□□□ 1.13
EWSR1-207ENST00000406548 LINS1Q8NG48 757 aa22.12■■□□□ 1.13
EWSR1-207ENST00000406548 PRAMEF22A3QJZ6 481 aa22.11■■□□□ 1.13
EWSR1-207ENST00000406548 GRM8O00222 908 aa22.11■■□□□ 1.13
EWSR1-207ENST00000406548 ARHGEF25Q86VW2 580 aa22.11■■□□□ 1.13
EWSR1-207ENST00000406548 SUCLG2Q96I99 432 aa22.11■■□□□ 1.13
EWSR1-207ENST00000406548 UTYO14607 1347 aa22.11■■□□□ 1.13
EWSR1-207ENST00000406548 MTMR6Q9Y217 621 aa22.11■■□□□ 1.13
EWSR1-207ENST00000406548 HIP1O00291 1037 aa22.1■■□□□ 1.13
EWSR1-207ENST00000406548 GCP02774 474 aa22.1■■□□□ 1.13
EWSR1-207ENST00000406548 ZKSCAN1P17029 563 aaPredicted RBP22.1■■□□□ 1.13
EWSR1-207ENST00000406548 RBM8AQ9Y5S9 174 aaKnown RBP22.1■■□□□ 1.13
EWSR1-207ENST00000406548 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
EWSR1-207ENST00000406548 LMTK3Q96Q04 1460 aa22.1■■□□□ 1.13
EWSR1-207ENST00000406548 ST3GAL1Q11201 340 aa22.1■■□□□ 1.13
EWSR1-207ENST00000406548 ANKRD24Q8TF21 1146 aa22.1■■□□□ 1.13
EWSR1-207ENST00000406548 KAZALD1Q96I82 304 aa22.1■■□□□ 1.13
EWSR1-207ENST00000406548 SASH1O94885 1247 aa22.09■■□□□ 1.13
EWSR1-207ENST00000406548 BICC1Q9H694 974 aaKnown RBP22.09■■□□□ 1.13
EWSR1-207ENST00000406548 DDX58O95786 925 aaKnown RBP22.08■■□□□ 1.13
EWSR1-207ENST00000406548 G3BP1Q13283 466 aaKnown RBP eCLIP22.08■■□□□ 1.133e-7■■□□□ 11.5
EWSR1-207ENST00000406548 GLIPR1L2Q4G1C9 344 aa22.08■■□□□ 1.13
EWSR1-207ENST00000406548 CREB3L3Q68CJ9 461 aa22.08■■□□□ 1.13
EWSR1-207ENST00000406548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.08■■□□□ 1.139e-7■■□□□ 12.4
EWSR1-207ENST00000406548 NMIQ13287 307 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms