RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 CCDC183Q5T5S1 534 aa9.53□□□□□ -0.88
LTBP1-202ENST00000404525 ZGPATQ8N5A5 531 aaKnown RBP9.53□□□□□ -0.88
LTBP1-202ENST00000404525 CCDC112Q8NEF3 446 aa9.53□□□□□ -0.88
LTBP1-202ENST00000404525 ZCRB1Q8TBF4 217 aaKnown RBP9.53□□□□□ -0.88
LTBP1-202ENST00000404525 PIK3C2BO00750 1634 aa9.53□□□□□ -0.88
LTBP1-202ENST00000404525 GNAI2P04899 355 aa9.53□□□□□ -0.88
LTBP1-202ENST00000404525 ERC1Q8IUD2 1116 aa9.53□□□□□ -0.88
LTBP1-202ENST00000404525 ZNF335Q9H4Z2 1342 aaPredicted RBP9.52□□□□□ -0.88
LTBP1-202ENST00000404525 FER1L4A9Z1Z3 1794 aa9.52□□□□□ -0.88
LTBP1-202ENST00000404525 GPT2Q8TD30 523 aa9.52□□□□□ -0.88
LTBP1-202ENST00000404525 TRIM34Q9BYJ4 488 aa9.52□□□□□ -0.88
LTBP1-202ENST00000404525 IGSF3O75054 1194 aa9.52□□□□□ -0.89
LTBP1-202ENST00000404525 RAD21O60216 631 aa9.52□□□□□ -0.89
LTBP1-202ENST00000404525 CCT4P50991 539 aaKnown RBP9.52□□□□□ -0.89
LTBP1-202ENST00000404525 CWC15Q9P013 229 aaKnown RBP9.52□□□□□ -0.89
LTBP1-202ENST00000404525 MADDQ8WXG6 1647 aa9.52□□□□□ -0.89
LTBP1-202ENST00000404525 IL2RBP14784 551 aa9.52□□□□□ -0.89
LTBP1-202ENST00000404525 DCTN1Q14203 1278 aa9.52□□□□□ -0.89
LTBP1-202ENST00000404525 THUMPD2Q9BTF0 503 aaKnown RBP9.52□□□□□ -0.89
LTBP1-202ENST00000404525 REREQ9P2R6 1566 aa9.52□□□□□ -0.89
LTBP1-202ENST00000404525 ANKARQ7Z5J8 1434 aa9.52□□□□□ -0.89
LTBP1-202ENST00000404525 PDIA4P13667 645 aaKnown RBP9.51□□□□□ -0.89
LTBP1-202ENST00000404525 OGFRQ9NZT2 677 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 TCEAL9Q9UHQ7 104 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 FRMPD1Q5SYB0 1578 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 DEPDC5O75140 1603 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 SETBP1Q9Y6X0 1596 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 ZNF396Q96N95 335 aaPredicted RBP9.51□□□□□ -0.89
LTBP1-202ENST00000404525 IL16Q14005 1332 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 SART3Q15020 963 aaKnown RBP9.51□□□□□ -0.89
LTBP1-202ENST00000404525 TTC22Q5TAA0 569 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 AEBP1Q8IUX7 1158 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 BCL2L12Q9HB09 334 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 PRM3Q9NNZ6 103 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 CDCA7Q9BWT1 371 aaPredicted RBP9.51□□□□□ -0.89
LTBP1-202ENST00000404525 USP26Q9BXU7 913 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 SPATA31D1Q6ZQQ2 1576 aa9.51□□□□□ -0.89
LTBP1-202ENST00000404525 PIP4K2AP48426 406 aaPredicted RBP9.5□□□□□ -0.89
LTBP1-202ENST00000404525 AKAP4Q5JQC9 854 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 JMYQ8N9B5 988 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 FMNL2Q96PY5 1086 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 CCDC192P0DO97 292 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 MYL6BP14649 208 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 ZSCAN20P17040 1043 aaPredicted RBP9.5□□□□□ -0.89
LTBP1-202ENST00000404525 U2AF2P26368 475 aaKnown RBP eCLIP9.5□□□□□ -0.89
LTBP1-202ENST00000404525 PKP1Q13835 747 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 ANKRD1Q15327 319 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 TEX13AQ9BXU3 409 aaPredicted RBP9.5□□□□□ -0.89
LTBP1-202ENST00000404525 BTG4Q9NY30 223 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 CEP170BQ9Y4F5 1589 aaPredicted RBP9.5□□□□□ -0.89
LTBP1-202ENST00000404525 DDB1Q16531 1140 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 FILIP1LQ4L180 1135 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 GDPD2Q9HCC8 539 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
LTBP1-202ENST00000404525 SRCIN1Q9C0H9 1055 aa9.5□□□□□ -0.89
LTBP1-202ENST00000404525 FIBPO43427 364 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 PTCD1O75127 700 aaKnown RBP9.49□□□□□ -0.89
LTBP1-202ENST00000404525 TMX3Q96JJ7 454 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 MIS18AQ9NYP9 233 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 NAP1L1P55209 391 aaKnown RBP9.49□□□□□ -0.89
LTBP1-202ENST00000404525 SMARCE1Q969G3 411 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 EYA1Q99502 592 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 BCL11BQ9C0K0 894 aaPredicted RBP9.49□□□□□ -0.89
LTBP1-202ENST00000404525 CALCOCO1Q9P1Z2 691 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 ADGRL3Q9HAR2 1447 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 VWDEQ8N2E2 1590 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 C17orf53Q8N3J3 647 aaPredicted RBP9.49□□□□□ -0.89
LTBP1-202ENST00000404525 PDILTQ8N807 584 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 DDX17Q92841 729 aaKnown RBP9.49□□□□□ -0.89
LTBP1-202ENST00000404525 TBC1D2BQ9UPU7 963 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 TIGD1Q96MW7 591 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 LRRCC1Q9C099 1032 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 NEXMIFQ5QGS0 1516 aa9.49□□□□□ -0.89
LTBP1-202ENST00000404525 ERICH4A6NGS2 130 aa9.48□□□□□ -0.89
LTBP1-202ENST00000404525 RIOK3O14730 519 aaKnown RBP9.48□□□□□ -0.89
LTBP1-202ENST00000404525 DNAJC2Q99543 621 aaKnown RBP9.48□□□□□ -0.89
LTBP1-202ENST00000404525 CYP46A1Q9Y6A2 500 aa9.48□□□□□ -0.89
LTBP1-202ENST00000404525 SETD1BQ9UPS6 1966 aaKnown RBP9.48□□□□□ -0.89
LTBP1-202ENST00000404525 KRT85P78386 507 aa9.48□□□□□ -0.89
LTBP1-202ENST00000404525 KIF2CQ99661 725 aa9.48□□□□□ -0.89
LTBP1-202ENST00000404525 CTDP1Q9Y5B0 961 aaPredicted RBP9.48□□□□□ -0.89
LTBP1-202ENST00000404525 USP6P35125 1406 aa9.48□□□□□ -0.89
LTBP1-202ENST00000404525 GABPB1Q06547 395 aaPredicted RBP9.48□□□□□ -0.89
LTBP1-202ENST00000404525 STK38Q15208 465 aa9.48□□□□□ -0.89
LTBP1-202ENST00000404525 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
LTBP1-202ENST00000404525 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.48□□□□□ -0.89
LTBP1-202ENST00000404525 SMC2O95347 1197 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 CCDC43Q96MW1 224 aaKnown RBP9.47□□□□□ -0.89
LTBP1-202ENST00000404525 PCDH11XQ9BZA7 1347 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 PCDH11YQ9BZA8 1340 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
LTBP1-202ENST00000404525 PLEKHM2Q8IWE5 1019 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 ARHGAP45Q92619 1136 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 C16orf45Q96MC5 204 aaPredicted RBP9.47□□□□□ -0.89
LTBP1-202ENST00000404525 MYO6Q9UM54 1294 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 ZNF652Q9Y2D9 606 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 KDM4AO75164 1064 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 TNNT1P13805 278 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 MX1P20591 662 aa9.47□□□□□ -0.89
LTBP1-202ENST00000404525 RPAP2Q8IXW5 612 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms