RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 CFAP100Q494V2 611 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 CCAR1Q8IX12 1150 aaKnown RBP16.35■□□□□ 0.21
HMGA2-204ENST00000403681 EVI5LQ96CN4 794 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 CYP2E1P05181 493 aaPredicted RBP16.35■□□□□ 0.21
HMGA2-204ENST00000403681 KIAA1524Q8TCG1 905 aa16.35■□□□□ 0.21
HMGA2-204ENST00000403681 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
HMGA2-204ENST00000403681 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
HMGA2-204ENST00000403681 CBX8Q9HC52 389 aa16.34■□□□□ 0.21
HMGA2-204ENST00000403681 TOMM22Q9NS69 142 aa16.34■□□□□ 0.21
HMGA2-204ENST00000403681 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
HMGA2-204ENST00000403681 RALYLQ86SE5 291 aaKnown RBP16.34■□□□□ 0.21
HMGA2-204ENST00000403681 RBM8AQ9Y5S9 174 aaKnown RBP16.34■□□□□ 0.21
HMGA2-204ENST00000403681 CBFA2T2O43439 604 aa16.34■□□□□ 0.21
HMGA2-204ENST00000403681 IL13P35225 146 aa16.34■□□□□ 0.21
HMGA2-204ENST00000403681 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
HMGA2-204ENST00000403681 LRMPQ12912 555 aa16.34■□□□□ 0.21
HMGA2-204ENST00000403681 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
HMGA2-204ENST00000403681 RTL1A6NKG5 1358 aa16.34■□□□□ 0.21
HMGA2-204ENST00000403681 HSPA4P34932 840 aa16.33■□□□□ 0.21
HMGA2-204ENST00000403681 TRDNQ13061 729 aa16.33■□□□□ 0.21
HMGA2-204ENST00000403681 VPS53Q5VIR6 699 aa16.33■□□□□ 0.21
HMGA2-204ENST00000403681 ZNF75DP51815 510 aa16.33■□□□□ 0.2
HMGA2-204ENST00000403681 TSR1Q2NL82 804 aaKnown RBP16.33■□□□□ 0.2
HMGA2-204ENST00000403681 TTLL5Q6EMB2 1281 aa16.33■□□□□ 0.2
HMGA2-204ENST00000403681 ZNF330Q9Y3S2 320 aaPredicted RBP16.33■□□□□ 0.2
HMGA2-204ENST00000403681 EID1Q9Y6B2 187 aa16.33■□□□□ 0.2
HMGA2-204ENST00000403681 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
HMGA2-204ENST00000403681 SAMD9LQ8IVG5 1584 aa16.32■□□□□ 0.2
HMGA2-204ENST00000403681 DNAAF4Q8WXU2 420 aa16.32■□□□□ 0.2
HMGA2-204ENST00000403681 RIMS2Q9UQ26 1411 aa16.32■□□□□ 0.2
HMGA2-204ENST00000403681 PNMA6EA0A0J9YXQ4 647 aa16.32■□□□□ 0.2
HMGA2-204ENST00000403681 SGSM2O43147 1006 aa16.32■□□□□ 0.2
HMGA2-204ENST00000403681 DHX16O60231 1041 aaKnown RBP16.32■□□□□ 0.2
HMGA2-204ENST00000403681 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.32■□□□□ 0.2
HMGA2-204ENST00000403681 BIN1O00499 593 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 PDE4CQ08493 712 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 EIF4A2Q14240 407 aaKnown RBP16.31■□□□□ 0.2
HMGA2-204ENST00000403681 ERO1AQ96HE7 468 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 CHD1O14646 1710 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 CHL1O00533 1208 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 SOS1Q07889 1333 aaPredicted RBP16.31■□□□□ 0.2
HMGA2-204ENST00000403681 SKIDA1Q1XH10 827 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 RAD50Q92878 1312 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 ZSCAN12O43309 604 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 ATP2B3Q16720 1220 aa16.31■□□□□ 0.2
HMGA2-204ENST00000403681 ZSCAN16Q9H4T2 348 aaPredicted RBP16.3■□□□□ 0.2
HMGA2-204ENST00000403681 DNAI1Q9UI46 699 aa16.3■□□□□ 0.2
HMGA2-204ENST00000403681 APPP05067 770 aa16.3■□□□□ 0.2
HMGA2-204ENST00000403681 SETQ01105 290 aaPredicted RBP16.3■□□□□ 0.2
HMGA2-204ENST00000403681 JMYQ8N9B5 988 aa16.3■□□□□ 0.2
HMGA2-204ENST00000403681 ZSCAN25Q6NSZ9 544 aa16.3■□□□□ 0.2
HMGA2-204ENST00000403681 AOPEPQ8N6M6 819 aa16.3■□□□□ 0.2
HMGA2-204ENST00000403681 ERLIN1O75477 346 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 EIF3JO75822 258 aaKnown RBP16.29■□□□□ 0.2
HMGA2-204ENST00000403681 ELF2Q15723 593 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 GTF3C6Q969F1 213 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 E9PCH4 1651 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 RUFY3Q7L099 469 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 ERCC4Q92889 916 aaPredicted RBP16.29■□□□□ 0.2
HMGA2-204ENST00000403681 BRF1Q92994 677 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 PI4KAP2A4QPH2 592 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 CCDC70Q6NSX1 233 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 PI4KAP1Q8N8J0 262 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 RGS12O14924 1447 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 NFXL1Q6ZNB6 911 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 OSBPL3Q9H4L5 887 aa16.29■□□□□ 0.2
HMGA2-204ENST00000403681 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
HMGA2-204ENST00000403681 CCT2P78371 535 aaKnown RBP16.28■□□□□ 0.2
HMGA2-204ENST00000403681 SYT10Q6XYQ8 523 aa16.28■□□□□ 0.2
HMGA2-204ENST00000403681 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
HMGA2-204ENST00000403681 LIG1P18858 919 aa16.28■□□□□ 0.2
HMGA2-204ENST00000403681 ANKRD20A12PQ8NF67 263 aa16.28■□□□□ 0.2
HMGA2-204ENST00000403681 RASSF8Q8NHQ8 419 aa16.28■□□□□ 0.2
HMGA2-204ENST00000403681 USP16Q9Y5T5 823 aa16.28■□□□□ 0.2
HMGA2-204ENST00000403681 FOXO3O43524 673 aa16.27■□□□□ 0.2
HMGA2-204ENST00000403681 CSB-PGBD3P0DP91 1061 aa16.27■□□□□ 0.2
HMGA2-204ENST00000403681 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.2
HMGA2-204ENST00000403681 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.2
HMGA2-204ENST00000403681 CD109Q6YHK3 1445 aa16.27■□□□□ 0.2
HMGA2-204ENST00000403681 NEK1Q96PY6 1258 aa16.27■□□□□ 0.2
HMGA2-204ENST00000403681 PLXNC1O60486 1568 aa16.27■□□□□ 0.2
HMGA2-204ENST00000403681 IPO7O95373 1038 aaKnown RBP16.27■□□□□ 0.2
HMGA2-204ENST00000403681 FBXO31Q5XUX0 539 aaPredicted RBP16.27■□□□□ 0.2
HMGA2-204ENST00000403681 CLSTN2Q9H4D0 955 aa16.27■□□□□ 0.2
HMGA2-204ENST00000403681 MTMR6Q9Y217 621 aa16.27■□□□□ 0.2
HMGA2-204ENST00000403681 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.2
HMGA2-204ENST00000403681 PIK3R4Q99570 1358 aa16.27■□□□□ 0.19
HMGA2-204ENST00000403681 CASQ1P31415 396 aa16.27■□□□□ 0.19
HMGA2-204ENST00000403681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.27■□□□□ 0.19
HMGA2-204ENST00000403681 ASXL2Q76L83 1435 aa16.27■□□□□ 0.19
HMGA2-204ENST00000403681 CCDC102AQ96A19 550 aa16.27■□□□□ 0.19
HMGA2-204ENST00000403681 TMX1Q9H3N1 280 aa16.27■□□□□ 0.19
HMGA2-204ENST00000403681 LARP1Q6PKG0 1096 aaKnown RBP16.26■□□□□ 0.19
HMGA2-204ENST00000403681 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.26■□□□□ 0.19
HMGA2-204ENST00000403681 ZNF215Q9UL58 517 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms