RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 BICDL1Q6ZP65 573 aa22.12■■□□□ 1.13
PTCHD3P3-201ENST00000403073 ZBTB3Q9H5J0 574 aa22.12■■□□□ 1.13
PTCHD3P3-201ENST00000403073 PHAXQ9H814 394 aaKnown RBP22.12■■□□□ 1.13
PTCHD3P3-201ENST00000403073 TM4SF1P30408 202 aa22.11■■□□□ 1.13
PTCHD3P3-201ENST00000403073 STK31Q9BXU1 1019 aa22.11■■□□□ 1.13
PTCHD3P3-201ENST00000403073 C4AP0C0L4 1744 aa22.11■■□□□ 1.13
PTCHD3P3-201ENST00000403073 MAP3K15Q6ZN16 1313 aa22.1■■□□□ 1.13
PTCHD3P3-201ENST00000403073 SLC4A2P04920 1241 aa22.1■■□□□ 1.13
PTCHD3P3-201ENST00000403073 NFIXQ14938 502 aa22.1■■□□□ 1.13
PTCHD3P3-201ENST00000403073 TBC1D9BQ66K14 1250 aa22.1■■□□□ 1.13
PTCHD3P3-201ENST00000403073 PPP1R1BQ9UD71 204 aaPredicted RBP22.1■■□□□ 1.13
PTCHD3P3-201ENST00000403073 ERVV-1B6SEH8 477 aa22.09■■□□□ 1.13
PTCHD3P3-201ENST00000403073 DDR1Q08345 913 aa22.09■■□□□ 1.13
PTCHD3P3-201ENST00000403073 CLEC4GQ6UXB4 293 aa22.08■■□□□ 1.13
PTCHD3P3-201ENST00000403073 G2E3Q7L622 706 aa22.08■■□□□ 1.13
PTCHD3P3-201ENST00000403073 PARP3Q9Y6F1 533 aa22.08■■□□□ 1.13
PTCHD3P3-201ENST00000403073 ANKRD13DQ6ZTN6 518 aa22.07■■□□□ 1.12
PTCHD3P3-201ENST00000403073 YTHDC1Q96MU7 727 aaKnown RBP22.07■■□□□ 1.12
PTCHD3P3-201ENST00000403073 ZNF652Q9Y2D9 606 aa22.07■■□□□ 1.12
PTCHD3P3-201ENST00000403073 POLRMTO00411 1230 aaKnown RBP22.06■■□□□ 1.12
PTCHD3P3-201ENST00000403073 RGL2O15211 777 aa22.05■■□□□ 1.12
PTCHD3P3-201ENST00000403073 GIGYF2Q6Y7W6 1299 aaKnown RBP22.05■■□□□ 1.12
PTCHD3P3-201ENST00000403073 KLHL34Q8N239 644 aa22.05■■□□□ 1.12
PTCHD3P3-201ENST00000403073 SETDB2Q96T68 719 aa22.05■■□□□ 1.12
PTCHD3P3-201ENST00000403073 SERPINB2P05120 415 aa22.04■■□□□ 1.12
PTCHD3P3-201ENST00000403073 PLBD2Q8NHP8 589 aa22.04■■□□□ 1.12
PTCHD3P3-201ENST00000403073 NIP7Q9Y221 180 aaKnown RBP eCLIP22.04■■□□□ 1.12
PTCHD3P3-201ENST00000403073 LRP5O75197 1615 aa22.03■■□□□ 1.12
PTCHD3P3-201ENST00000403073 FHDC1Q9C0D6 1143 aaPredicted RBP22.03■■□□□ 1.12
PTCHD3P3-201ENST00000403073 COL24A1Q17RW2 1714 aa22.03■■□□□ 1.12
PTCHD3P3-201ENST00000403073 GPTP24298 496 aa22.02■■□□□ 1.12
PTCHD3P3-201ENST00000403073 RIC3Q7Z5B4 369 aa22.02■■□□□ 1.12
PTCHD3P3-201ENST00000403073 SCN7AQ01118 1682 aa22.01■■□□□ 1.11
PTCHD3P3-201ENST00000403073 FAM177BA6PVY3 158 aa22.01■■□□□ 1.11
PTCHD3P3-201ENST00000403073 ZNF34Q8IZ26 560 aa22.01■■□□□ 1.11
PTCHD3P3-201ENST00000403073 SSH1Q8WYL5 1049 aa22.01■■□□□ 1.11
PTCHD3P3-201ENST00000403073 DDX58O95786 925 aaKnown RBP22■■□□□ 1.11
PTCHD3P3-201ENST00000403073 CT47B1P0C2W7 299 aaPredicted RBP22■■□□□ 1.11
PTCHD3P3-201ENST00000403073 FLIIQ13045 1269 aa22■■□□□ 1.11
PTCHD3P3-201ENST00000403073 TCIRG1Q13488 830 aa22■■□□□ 1.11
PTCHD3P3-201ENST00000403073 MRPL50Q8N5N7 158 aaKnown RBP22■■□□□ 1.11
PTCHD3P3-201ENST00000403073 ZNF428Q96B54 188 aa22■■□□□ 1.11
PTCHD3P3-201ENST00000403073 BCL2L13Q9BXK5 485 aa22■■□□□ 1.11
PTCHD3P3-201ENST00000403073 KSR2Q6VAB6 950 aa21.99■■□□□ 1.11
PTCHD3P3-201ENST00000403073 CARMIL3Q8ND23 1372 aa21.99■■□□□ 1.11
PTCHD3P3-201ENST00000403073 PI4KAP2A4QPH2 592 aa21.98■■□□□ 1.11
PTCHD3P3-201ENST00000403073 FKBP5Q13451 457 aaPredicted RBP21.98■■□□□ 1.11
PTCHD3P3-201ENST00000403073 HSP90AB3PQ58FF7 597 aa21.98■■□□□ 1.11
PTCHD3P3-201ENST00000403073 CCDC24Q8N4L8 307 aa21.98■■□□□ 1.11
PTCHD3P3-201ENST00000403073 PI4KAP1Q8N8J0 262 aa21.98■■□□□ 1.11
PTCHD3P3-201ENST00000403073 SYT17Q9BSW7 474 aa21.98■■□□□ 1.11
PTCHD3P3-201ENST00000403073 MAP3K2Q9Y2U5 619 aa21.98■■□□□ 1.11
PTCHD3P3-201ENST00000403073 UBN2Q6ZU65 1347 aa21.98■■□□□ 1.11
PTCHD3P3-201ENST00000403073 BCORQ6W2J9 1755 aa21.97■■□□□ 1.11
PTCHD3P3-201ENST00000403073 ATP5J2-PTCD1G3V325 749 aa21.97■■□□□ 1.11
PTCHD3P3-201ENST00000403073 ALDH1L2Q3SY69 923 aa21.97■■□□□ 1.11
PTCHD3P3-201ENST00000403073 SUSD4Q5VX71 490 aa21.97■■□□□ 1.11
PTCHD3P3-201ENST00000403073 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
PTCHD3P3-201ENST00000403073 CD2APQ9Y5K6 639 aa21.97■■□□□ 1.11
PTCHD3P3-201ENST00000403073 ATP10DQ9P241 1426 aa21.97■■□□□ 1.11
PTCHD3P3-201ENST00000403073 PRR5LQ6MZQ0 368 aa21.96■■□□□ 1.11
PTCHD3P3-201ENST00000403073 MYD88Q99836 296 aa21.96■■□□□ 1.11
PTCHD3P3-201ENST00000403073 SMC4Q9NTJ3 1288 aa21.96■■□□□ 1.11
PTCHD3P3-201ENST00000403073 ADCY9O60503 1353 aa21.96■■□□□ 1.11
PTCHD3P3-201ENST00000403073 NPHP1O15259 732 aa21.95■■□□□ 1.1
PTCHD3P3-201ENST00000403073 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
PTCHD3P3-201ENST00000403073 TPTE2Q6XPS3 522 aa21.95■■□□□ 1.1
PTCHD3P3-201ENST00000403073 NLGN2Q8NFZ4 835 aa21.95■■□□□ 1.1
PTCHD3P3-201ENST00000403073 ISCA1Q9BUE6 129 aa21.95■■□□□ 1.1
PTCHD3P3-201ENST00000403073 METTL22Q9BUU2 404 aaPredicted RBP21.95■■□□□ 1.1
PTCHD3P3-201ENST00000403073 SRCAPQ6ZRS2 3230 aa21.95■■□□□ 1.1
PTCHD3P3-201ENST00000403073 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
PTCHD3P3-201ENST00000403073 CNBD1Q8NA66 436 aa21.94■■□□□ 1.1
PTCHD3P3-201ENST00000403073 F6X3S4 739 aa21.93■■□□□ 1.1
PTCHD3P3-201ENST00000403073 PARP10Q53GL7 1025 aa21.93■■□□□ 1.1
PTCHD3P3-201ENST00000403073 C10orf71Q711Q0 1435 aa21.92■■□□□ 1.1
PTCHD3P3-201ENST00000403073 GTF2E1P29083 439 aaPredicted RBP21.92■■□□□ 1.1
PTCHD3P3-201ENST00000403073 PPP1R42Q7Z4L9 355 aa21.92■■□□□ 1.1
PTCHD3P3-201ENST00000403073 NUTM1Q86Y26 1132 aa21.92■■□□□ 1.1
PTCHD3P3-201ENST00000403073 UTP14AQ9BVJ6 771 aaKnown RBP21.92■■□□□ 1.1
PTCHD3P3-201ENST00000403073 BCAR3O75815 825 aa21.91■■□□□ 1.1
PTCHD3P3-201ENST00000403073 NTSR2O95665 410 aa21.91■■□□□ 1.1
PTCHD3P3-201ENST00000403073 ST5P78524 1137 aa21.91■■□□□ 1.1
PTCHD3P3-201ENST00000403073 ERFEQ4G0M1 354 aa21.91■■□□□ 1.1
PTCHD3P3-201ENST00000403073 DNAAF4Q8WXU2 420 aa21.91■■□□□ 1.1
PTCHD3P3-201ENST00000403073 NYXQ9GZU5 481 aa21.91■■□□□ 1.1
PTCHD3P3-201ENST00000403073 A0A0G2JLW4 131 aa21.9■■□□□ 1.1
PTCHD3P3-201ENST00000403073 TRIM28Q13263 835 aaKnown RBP21.9■■□□□ 1.1
PTCHD3P3-201ENST00000403073 BRIP1Q9BX63 1249 aa21.9■■□□□ 1.1
PTCHD3P3-201ENST00000403073 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
PTCHD3P3-201ENST00000403073 IGKV5-2P06315 115 aa21.89■■□□□ 1.09
PTCHD3P3-201ENST00000403073 DPEP1P16444 411 aa21.89■■□□□ 1.09
PTCHD3P3-201ENST00000403073 TGFB2P61812 414 aa21.89■■□□□ 1.09
PTCHD3P3-201ENST00000403073 NEXNQ0ZGT2 675 aa21.89■■□□□ 1.09
PTCHD3P3-201ENST00000403073 SYNE4Q8N205 404 aa21.89■■□□□ 1.09
PTCHD3P3-201ENST00000403073 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.09
PTCHD3P3-201ENST00000403073 PTPRCP08575 1304 aa21.88■■□□□ 1.09
PTCHD3P3-201ENST00000403073 NUP98P52948 1817 aa21.88■■□□□ 1.09
PTCHD3P3-201ENST00000403073 CHRNA5P30532 468 aa21.88■■□□□ 1.09
PTCHD3P3-201ENST00000403073 BRPF1P55201 1214 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms