RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CYP2C19P33261 490 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 AFAP1Q8N556 730 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 USP19O94966 1318 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
PTPRM-203ENST00000400060 GNAI2P04899 355 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 IFIT2P09913 472 aaKnown RBP11.54□□□□□ -0.56
PTPRM-203ENST00000400060 ME1P48163 572 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 NEXNQ0ZGT2 675 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 ZSCAN25Q6NSZ9 544 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 CERS3Q8IU89 383 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 STK11IPQ8N1F8 1099 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 TMX1Q9H3N1 280 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 NSD2O96028 1365 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 MYO1BO43795 1136 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 FAM177A1Q8N128 213 aaPredicted RBP11.53□□□□□ -0.56
PTPRM-203ENST00000400060 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 UGGT2Q9NYU1 1516 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 CTIFO43310 598 aaKnown RBP11.53□□□□□ -0.56
PTPRM-203ENST00000400060 HSF2BPO75031 334 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 BRD1O95696 1058 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 SYT10Q6XYQ8 523 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 NPHP3Q7Z494 1330 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 A0A0G2JS52 829 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 IRX1P78414 480 aaPredicted RBP11.53□□□□□ -0.56
PTPRM-203ENST00000400060 AKAP17AQ02040 695 aaKnown RBP11.53□□□□□ -0.56
PTPRM-203ENST00000400060 CCAR1Q8IX12 1150 aaKnown RBP11.53□□□□□ -0.56
PTPRM-203ENST00000400060 NGDNQ8NEJ9 315 aaKnown RBP11.53□□□□□ -0.56
PTPRM-203ENST00000400060 CCDC12Q8WUD4 166 aaPredicted RBP11.53□□□□□ -0.56
PTPRM-203ENST00000400060 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTPRM-203ENST00000400060 CNPY2Q9Y2B0 182 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 CPLX1O14810 134 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 GUCY2CP25092 1073 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 CFAP70Q5T0N1 1121 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 MSL1Q68DK7 614 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 ARFGAP2Q8N6H7 521 aa11.53□□□□□ -0.56
PTPRM-203ENST00000400060 PPP2R3AQ06190 1150 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 NAA25Q14CX7 972 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 IMMTQ16891 758 aaKnown RBP11.52□□□□□ -0.56
PTPRM-203ENST00000400060 SKIDA1Q1XH10 827 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 NEK11Q8NG66 645 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 TSC1Q92574 1164 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 POLR3AO14802 1390 aaPredicted RBP11.52□□□□□ -0.56
PTPRM-203ENST00000400060 AMPHP49418 695 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 MCM6Q14566 821 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 SPECC1LQ69YQ0 1117 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 CNPY4Q8N129 248 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 WDR66Q8TBY9 1149 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 SWAP70Q9UH65 585 aa11.52□□□□□ -0.56
PTPRM-203ENST00000400060 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
PTPRM-203ENST00000400060 RGS22Q8NE09 1264 aa11.52□□□□□ -0.57
PTPRM-203ENST00000400060 GPT2Q8TD30 523 aa11.52□□□□□ -0.57
PTPRM-203ENST00000400060 COL17A1Q9UMD9 1497 aaPredicted RBP11.52□□□□□ -0.57
PTPRM-203ENST00000400060 PPFIA3O75145 1194 aa11.52□□□□□ -0.57
PTPRM-203ENST00000400060 FEZ2Q9UHY8 353 aaPredicted RBP11.52□□□□□ -0.57
PTPRM-203ENST00000400060 IFFO1Q0D2I5 559 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 CKAP2LQ8IYA6 745 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 SSH1Q8WYL5 1049 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 FMNL2Q96PY5 1086 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 RLBP1P12271 317 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 KIF5BP33176 963 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 MTHFSP49914 203 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 TWISTNBQ3B726 338 aaPredicted RBP11.51□□□□□ -0.57
PTPRM-203ENST00000400060 UTP14AQ9BVJ6 771 aaKnown RBP11.51□□□□□ -0.57
PTPRM-203ENST00000400060 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
PTPRM-203ENST00000400060 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 SAFBQ15424 915 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTPRM-203ENST00000400060 ATL3Q6DD88 541 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 BLOC1S2Q6QNY1 142 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 MRFAP1L1Q96HT8 127 aa11.51□□□□□ -0.57
PTPRM-203ENST00000400060 POLR1AO95602 1720 aaPredicted RBP11.51□□□□□ -0.57
PTPRM-203ENST00000400060 GJB2P29033 226 aa11.5□□□□□ -0.57
PTPRM-203ENST00000400060 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
PTPRM-203ENST00000400060 GDPD2Q9HCC8 539 aa11.5□□□□□ -0.57
PTPRM-203ENST00000400060 MAGI1Q96QZ7 1491 aaPredicted RBP11.5□□□□□ -0.57
PTPRM-203ENST00000400060 RAB11FIP3O75154 756 aa11.5□□□□□ -0.57
PTPRM-203ENST00000400060 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
PTPRM-203ENST00000400060 PHLPP2Q6ZVD8 1323 aa11.5□□□□□ -0.57
PTPRM-203ENST00000400060 ODF2Q5BJF6 829 aa11.5□□□□□ -0.57
PTPRM-203ENST00000400060 PCMTD1Q96MG8 357 aaPredicted RBP11.5□□□□□ -0.57
PTPRM-203ENST00000400060 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
PTPRM-203ENST00000400060 TTC41PQ6P2S7 1318 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 REREQ9P2R6 1566 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 CTAGE9A4FU28 777 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 CEP57Q86XR8 500 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 C17orf53Q8N3J3 647 aaPredicted RBP11.49□□□□□ -0.57
PTPRM-203ENST00000400060 TSR2Q969E8 191 aaKnown RBP11.49□□□□□ -0.57
PTPRM-203ENST00000400060 CCDC114Q96M63 670 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 CEP89Q96ST8 783 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 NAA15Q9BXJ9 866 aaKnown RBP11.49□□□□□ -0.57
PTPRM-203ENST00000400060 LOC102724159A0A0B4J2E5 919 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 ELL2O00472 640 aaPredicted RBP11.49□□□□□ -0.57
PTPRM-203ENST00000400060 CCDC175P0C221 793 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 TXLNAP40222 546 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 PWP2Q15269 919 aaKnown RBP11.49□□□□□ -0.57
PTPRM-203ENST00000400060 JAKMIP1Q96N16 626 aaKnown RBP11.49□□□□□ -0.57
PTPRM-203ENST00000400060 SF3B2Q13435 895 aaKnown RBP11.49□□□□□ -0.57
PTPRM-203ENST00000400060 NUP133Q8WUM0 1156 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms