RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 MNAT1P51948 309 aa12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 PPP1R42Q7Z4L9 355 aa12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 ZBTB24O43167 697 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 SMIM23A6NLE4 172 aa12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 PPP2R5CQ13362 524 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 GBP7Q8N8V2 638 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 DDB1Q16531 1140 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 CKAP2LQ8IYA6 745 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 BIRC2Q13490 618 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 C1orf115Q9H7X2 142 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 SAMM50Q9Y512 469 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 PSMD6Q15008 389 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 CBFA2T2O43439 604 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
CACNA1C-208ENST00000399601 TDRD12Q587J7 1177 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 AMOTL2Q9Y2J4 779 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 PPARDQ03181 441 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 CEP57Q86XR8 500 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 SARNPP82979 210 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 TRAK2O60296 914 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 ZBTB16Q05516 673 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 MORC4Q8TE76 937 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 CDC5LQ99459 802 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 DYNC1I1O14576 645 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 GNAI2P04899 355 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 SUDS3Q9H7L9 328 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 MRC2Q9UBG0 1479 aa12.81□□□□□ -0.36
CACNA1C-208ENST00000399601 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 CHRNA2Q15822 529 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 CCDC174Q6PII3 467 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 AKAP2Q9Y2D5 859 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 B4DLN1 442 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 MRPL12P52815 198 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 CFAP100Q494V2 611 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 CCDC170Q8IYT3 715 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 PRC1O43663 620 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 MYOM3Q5VTT5 1437 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
CACNA1C-208ENST00000399601 BICDL2A1A5D9 508 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 PPP1R12BO60237 982 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 IFIT5Q13325 482 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 ZBTB41Q5SVQ8 909 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 SPOUT1Q5T280 376 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 TRMT1Q9NXH9 659 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 URI1O94763 535 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 LDHCP07864 332 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 CEP135Q66GS9 1140 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 CEP83Q9Y592 693 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 CRCPO75575 148 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 PRPF31Q8WWY3 499 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 SETDB1Q15047 1291 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 NCBP1Q09161 790 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 SMARCC1Q92922 1105 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 SELENOSQ9BQE4 189 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 CLSTN2Q9H4D0 955 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 ZSWIM4Q9H7M6 989 aa12.79□□□□□ -0.36
CACNA1C-208ENST00000399601 USP47Q96K76 1375 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 MRE11P49959 708 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 MYD88Q99836 296 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 ZNF644Q9H582 1327 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 GNAT3A8MTJ3 354 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 AACSQ86V21 672 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 CCDC89Q8N998 374 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 UBXN4Q92575 508 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 CD109Q6YHK3 1445 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 NEK4P51957 841 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 CCDC65Q8IXS2 484 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 VIMP08670 466 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 GEN1Q17RS7 908 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 TWISTNBQ3B726 338 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 CCDC117Q8IWD4 279 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 SWAP70Q9UH65 585 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 RTCBQ9Y3I0 505 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 BAG3O95817 575 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 TEX13AQ9BXU3 409 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-208ENST00000399601 SPECC1LQ69YQ0 1117 aa12.77□□□□□ -0.36
CACNA1C-208ENST00000399601 DPY19L2Q6NUT2 758 aa12.77□□□□□ -0.36
CACNA1C-208ENST00000399601 KIF4AO95239 1232 aa12.77□□□□□ -0.36
CACNA1C-208ENST00000399601 HAUS7Q99871 368 aa12.77□□□□□ -0.36
CACNA1C-208ENST00000399601 IQCGQ9H095 443 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms