RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 CLIP2Q9UDT6 1046 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 IDH1O75874 414 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 SFPQP23246 707 aaKnown RBP eCLIP12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 RFC1P35251 1148 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 AIDAQ96BJ3 306 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 TAF12Q16514 161 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 KRT28Q7Z3Y7 464 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 CADPS2Q86UW7 1296 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 SIRT1Q96EB6 747 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 BAG6P46379 1132 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 KIF20AO95235 890 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 MAP3K11Q16584 847 aa12.89□□□□□ -0.35
CACNA1C-206ENST00000399595 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 LPXNO60711 386 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 EAPPQ56P03 285 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 DPH6Q7L8W6 267 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 PFDN4Q9NQP4 134 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 ODF2LQ9ULJ1 636 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 RAB3GAP2Q9H2M9 1393 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 TAOK3Q9H2K8 898 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 CYP46A1Q9Y6A2 500 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 PLS1Q14651 629 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 LARP1BQ659C4 914 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 NOL7Q9UMY1 257 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 FSD2A1L4K1 749 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 HIP1O00291 1037 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 DYNC1I1O14576 645 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 NBPF5PQ86XG9 351 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 KRT222Q8N1A0 295 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 SLC52A1Q9NWF4 448 aa12.88□□□□□ -0.35
CACNA1C-206ENST00000399595 VEZTQ9HBM0 779 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 GJC1P36383 396 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 MAP7D1Q3KQU3 841 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 NAA15Q9BXJ9 866 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 FAM114A2Q9NRY5 505 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 TOP1P11387 765 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 NOD1Q9Y239 953 aa12.87□□□□□ -0.35
CACNA1C-206ENST00000399595 MAFGO15525 162 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 SLU7O95391 586 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 KLHL10Q6JEL2 608 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 MCM4P33991 863 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 ATP2B3Q16720 1220 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 CPLX3Q8WVH0 158 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 CWC25Q9NXE8 425 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 KIF4AO95239 1232 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 FYCO1Q9BQS8 1478 aa12.86□□□□□ -0.35
CACNA1C-206ENST00000399595 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 FKBP15Q5T1M5 1219 aa12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 CACNA2D4Q7Z3S7 1137 aa12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 NUP88Q99567 741 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 C10orf67Q8IYJ2 551 aa12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 NOP9Q86U38 636 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
CACNA1C-206ENST00000399595 ANKS4BQ8N8V4 417 aa12.84□□□□□ -0.35
CACNA1C-206ENST00000399595 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
CACNA1C-206ENST00000399595 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
CACNA1C-206ENST00000399595 HSPA2P54652 639 aa12.84□□□□□ -0.35
CACNA1C-206ENST00000399595 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
CACNA1C-206ENST00000399595 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-206ENST00000399595 DIXDC1Q155Q3 683 aa12.84□□□□□ -0.35
CACNA1C-206ENST00000399595 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
CACNA1C-206ENST00000399595 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-206ENST00000399595 SNW1Q13573 536 aaKnown RBP12.83□□□□□ -0.35
CACNA1C-206ENST00000399595 CCDC174Q6PII3 467 aa12.83□□□□□ -0.35
CACNA1C-206ENST00000399595 SETDB2Q96T68 719 aa12.83□□□□□ -0.35
CACNA1C-206ENST00000399595 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
CACNA1C-206ENST00000399595 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-206ENST00000399595 GPTP24298 496 aa12.83□□□□□ -0.36
CACNA1C-206ENST00000399595 KIF22Q14807 665 aa12.83□□□□□ -0.36
CACNA1C-206ENST00000399595 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
CACNA1C-206ENST00000399595 GBP7Q8N8V2 638 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-206ENST00000399595 TMEM110-MUSTN1A8MSY1 372 aa12.83□□□□□ -0.36
CACNA1C-206ENST00000399595 F8W031 263 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms