RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TGIF2Q9GZN2 237 aa7.71□□□□□ -1.18
TRAPPC13-202ENST00000399438 ACBD3Q9H3P7 528 aa7.71□□□□□ -1.18
TRAPPC13-202ENST00000399438 GEMIN8Q9NWZ8 242 aaKnown RBP7.71□□□□□ -1.18
TRAPPC13-202ENST00000399438 MKRN1Q9UHC7 482 aaKnown RBP7.71□□□□□ -1.18
TRAPPC13-202ENST00000399438 CCDC61Q9Y6R9 512 aa7.71□□□□□ -1.18
TRAPPC13-202ENST00000399438 NOS1P29475 1434 aa7.71□□□□□ -1.18
TRAPPC13-202ENST00000399438 FAM163BP0C2L3 166 aa7.71□□□□□ -1.18
TRAPPC13-202ENST00000399438 RASSF7Q02833 373 aa7.71□□□□□ -1.18
TRAPPC13-202ENST00000399438 C3P01024 1663 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 SYNMO15061 1565 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 SPATA31D1Q6ZQQ2 1576 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 PARD3Q8TEW0 1356 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 PLEKHH1Q9ULM0 1364 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 DNAJC6O75061 913 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 BCAR3O75815 825 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 VAC14Q08AM6 782 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 ATL2Q8NHH9 583 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 IER2Q9BTL4 223 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 PRM3Q9NNZ6 103 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 PHF8Q9UPP1 1060 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 RIMS1Q86UR5 1692 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 ERVK-7P63135 1459 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 PIK3C2BO00750 1634 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 ENPP3O14638 875 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 NRDCO43847 1150 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 LDHAP00338 332 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 SCP2P22307 547 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 PUS10Q3MIT2 529 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 RAVER1Q8IY67 606 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 CASS4Q9NQ75 786 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 CLTCL1P53675 1640 aa7.7□□□□□ -1.18
TRAPPC13-202ENST00000399438 CBLBQ13191 982 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 LRPPRCP42704 1394 aaKnown RBP7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 ZMYM3Q14202 1370 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 OSBPP22059 807 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 DNAJA1P31689 397 aaKnown RBP7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 MNX1P50219 401 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 ODR4Q5SWX8 454 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 SVIPQ8NHG7 77 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 PRR7Q8TB68 274 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 CHST12Q9NRB3 414 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 TNNQ9UQP3 1299 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 FRAT1Q92837 279 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 MKL1Q969V6 931 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 NEUROD6Q96NK8 337 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 CABP2Q9NPB3 220 aa7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 AVENQ9NQS1 362 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC13-202ENST00000399438 PPP1R3GB7ZBB8 358 aa7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 TBC1D9Q6ZT07 1266 aa7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 TSR2Q969E8 191 aaKnown RBP7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 ZBTB12Q9Y330 459 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 NEURL4Q96JN8 1562 aa7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 GNALP38405 381 aa7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 FANCCQ00597 558 aa7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 ENOX2Q16206 610 aaKnown RBP7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 WASHC4Q2M389 1173 aa7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 FAM217BQ9NTX9 383 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 CTDP1Q9Y5B0 961 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC13-202ENST00000399438 DCAF8L1A6NGE4 600 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 TNFRSF10BO14763 440 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 MAN1A1P33908 653 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 NLRP6P59044 892 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 POU5F1BQ06416 359 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 GRXCR2A6NFK2 248 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 IFRD1O00458 451 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 CCSAPQ6IQ19 270 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 TTC30BQ8N4P2 665 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 ASB16Q96NS5 453 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 ESF1Q9H501 851 aaKnown RBP7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 GOLIM4O00461 696 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 NBPF20Q3BBV1 942 aa7.67□□□□□ -1.18
TRAPPC13-202ENST00000399438 VDRP11473 427 aa7.66□□□□□ -1.18
TRAPPC13-202ENST00000399438 XRCC5P13010 732 aaKnown RBP7.66□□□□□ -1.18
TRAPPC13-202ENST00000399438 TYW1Q9NV66 732 aaKnown RBP7.66□□□□□ -1.18
TRAPPC13-202ENST00000399438 FANCIQ9NVI1 1328 aa7.66□□□□□ -1.18
TRAPPC13-202ENST00000399438 ADGRB3O60242 1522 aa7.66□□□□□ -1.18
TRAPPC13-202ENST00000399438 ANP32AP39687 249 aaKnown RBP7.66□□□□□ -1.18
TRAPPC13-202ENST00000399438 PDILTQ8N807 584 aa7.66□□□□□ -1.18
TRAPPC13-202ENST00000399438 PANK1Q8TE04 598 aa7.66□□□□□ -1.18
TRAPPC13-202ENST00000399438 RSPH9Q9H1X1 276 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC13-202ENST00000399438 LZTS3O60299 673 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 COL6A1P12109 1028 aa7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 MPHOSPH6Q99547 160 aaKnown RBP7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 APBA2Q99767 749 aa7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 CCSER2Q9H7U1 834 aa7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 NOVA2Q9UNW9 492 aaKnown RBP7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 KIF1BO60333 1816 aa7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 PTGDRQ13258 359 aa7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 MAPRE1Q15691 268 aaKnown RBP7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 FAM161AQ3B820 660 aa7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 MORC1Q86VD1 984 aa7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 MSL3Q8N5Y2 521 aaKnown RBP7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 L3MBTL3Q96JM7 780 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 NAP1L4Q99733 375 aaKnown RBP7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 ARPC5LQ9BPX5 153 aa7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 TRPM1Q7Z4N2 1603 aa7.65□□□□□ -1.18
TRAPPC13-202ENST00000399438 PTPRMP28827 1452 aa7.65□□□□□ -1.19
TRAPPC13-202ENST00000399438 RNF123Q5XPI4 1314 aa7.65□□□□□ -1.19
TRAPPC13-202ENST00000399438 TIMM44O43615 452 aa7.65□□□□□ -1.19
TRAPPC13-202ENST00000399438 LDHCP07864 332 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms