RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 MAP3K2Q9Y2U5 619 aa13.77□□□□□ -0.21
C4orf3-201ENST00000399075 CLASRPQ8N2M8 674 aaKnown RBP13.76□□□□□ -0.21
C4orf3-201ENST00000399075 ORAI2Q96SN7 254 aa13.76□□□□□ -0.21
C4orf3-201ENST00000399075 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
C4orf3-201ENST00000399075 GPATCH3Q96I76 525 aa13.76□□□□□ -0.21
C4orf3-201ENST00000399075 ANXA1P04083 346 aa13.75□□□□□ -0.21
C4orf3-201ENST00000399075 LINS1Q8NG48 757 aa13.75□□□□□ -0.21
C4orf3-201ENST00000399075 RUFY2Q8WXA3 655 aa13.75□□□□□ -0.21
C4orf3-201ENST00000399075 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
C4orf3-201ENST00000399075 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
C4orf3-201ENST00000399075 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
C4orf3-201ENST00000399075 TTC14Q96N46 770 aa13.75□□□□□ -0.21
C4orf3-201ENST00000399075 SCN11AQ9UI33 1791 aa13.75□□□□□ -0.21
C4orf3-201ENST00000399075 WDR33Q9C0J8 1336 aaKnown RBP13.75□□□□□ -0.21
C4orf3-201ENST00000399075 DDX58O95786 925 aaKnown RBP13.74□□□□□ -0.21
C4orf3-201ENST00000399075 OS9Q13438 667 aaPredicted RBP13.74□□□□□ -0.21
C4orf3-201ENST00000399075 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
C4orf3-201ENST00000399075 ECHDC1Q9NTX5 307 aa13.74□□□□□ -0.21
C4orf3-201ENST00000399075 C1orf167Q5SNV9 1468 aa13.74□□□□□ -0.21
C4orf3-201ENST00000399075 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
C4orf3-201ENST00000399075 KIAA1211Q6ZU35 1233 aa13.74□□□□□ -0.21
C4orf3-201ENST00000399075 ERBB4Q15303 1308 aa13.74□□□□□ -0.21
C4orf3-201ENST00000399075 RGPD5Q99666 1765 aa13.74□□□□□ -0.21
C4orf3-201ENST00000399075 MAP4K4O95819 1239 aaPredicted RBP13.74□□□□□ -0.21
C4orf3-201ENST00000399075 ERBB3P21860 1342 aa13.73□□□□□ -0.21
C4orf3-201ENST00000399075 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
C4orf3-201ENST00000399075 KCNB2Q92953 911 aa13.73□□□□□ -0.21
C4orf3-201ENST00000399075 GRM8O00222 908 aa13.73□□□□□ -0.21
C4orf3-201ENST00000399075 HS1BP3Q53T59 392 aa13.73□□□□□ -0.21
C4orf3-201ENST00000399075 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
C4orf3-201ENST00000399075 DIAPH3Q9NSV4 1193 aa13.73□□□□□ -0.21
C4orf3-201ENST00000399075 MRC1P22897 1456 aa13.73□□□□□ -0.21
C4orf3-201ENST00000399075 TMEM63CQ9P1W3 806 aa13.72□□□□□ -0.21
C4orf3-201ENST00000399075 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
C4orf3-201ENST00000399075 C5P01031 1676 aa13.72□□□□□ -0.21
C4orf3-201ENST00000399075 RRP9O43818 475 aaKnown RBP13.72□□□□□ -0.21
C4orf3-201ENST00000399075 IFIT2P09913 472 aaKnown RBP13.71□□□□□ -0.21
C4orf3-201ENST00000399075 TMEM87AQ8NBN3 555 aa13.71□□□□□ -0.21
C4orf3-201ENST00000399075 EVI5LQ96CN4 794 aa13.71□□□□□ -0.21
C4orf3-201ENST00000399075 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
C4orf3-201ENST00000399075 RBSNQ9H1K0 784 aa13.71□□□□□ -0.21
C4orf3-201ENST00000399075 LIMCH1Q9UPQ0 1083 aa13.71□□□□□ -0.21
C4orf3-201ENST00000399075 RPAP1Q9BWH6 1393 aaPredicted RBP13.71□□□□□ -0.21
C4orf3-201ENST00000399075 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
C4orf3-201ENST00000399075 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.21
C4orf3-201ENST00000399075 PDIA6Q15084 440 aa13.71□□□□□ -0.21
C4orf3-201ENST00000399075 CWF19L2Q2TBE0 894 aaKnown RBP13.71□□□□□ -0.21
C4orf3-201ENST00000399075 CWC27Q6UX04 472 aaKnown RBP13.71□□□□□ -0.21
C4orf3-201ENST00000399075 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
C4orf3-201ENST00000399075 PDLIM2Q96JY6 352 aa13.71□□□□□ -0.21
C4orf3-201ENST00000399075 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
C4orf3-201ENST00000399075 HIP1O00291 1037 aa13.71□□□□□ -0.22
C4orf3-201ENST00000399075 RASEFQ8IZ41 740 aa13.71□□□□□ -0.22
C4orf3-201ENST00000399075 SYAP1Q96A49 352 aaPredicted RBP13.71□□□□□ -0.22
C4orf3-201ENST00000399075 SNRKQ9NRH2 765 aa13.71□□□□□ -0.22
C4orf3-201ENST00000399075 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.22
C4orf3-201ENST00000399075 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
C4orf3-201ENST00000399075 SUCLG2Q96I99 432 aa13.7□□□□□ -0.22
C4orf3-201ENST00000399075 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.7□□□□□ -0.22
C4orf3-201ENST00000399075 KDM6AO15550 1401 aaPredicted RBP13.7□□□□□ -0.22
C4orf3-201ENST00000399075 TRHP20396 242 aaPredicted RBP13.7□□□□□ -0.22
C4orf3-201ENST00000399075 AK2P54819 239 aa13.7□□□□□ -0.22
C4orf3-201ENST00000399075 COL18A1P39060 1754 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 FOXD4L5Q5VV16 416 aaPredicted RBP13.69□□□□□ -0.22
C4orf3-201ENST00000399075 ZNF790Q6PG37 636 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 LARP1Q6PKG0 1096 aaKnown RBP13.69□□□□□ -0.22
C4orf3-201ENST00000399075 RUFY3Q7L099 469 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 ZSCAN30Q86W11 494 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 FOXD4L4Q8WXT5 416 aaPredicted RBP13.69□□□□□ -0.22
C4orf3-201ENST00000399075 CHAMP1Q96JM3 812 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
C4orf3-201ENST00000399075 NPHP3Q7Z494 1330 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 VPS53Q5VIR6 699 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 AACSQ86V21 672 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 PA2G4Q9UQ80 394 aaKnown RBP13.69□□□□□ -0.22
C4orf3-201ENST00000399075 SPG7Q9UQ90 795 aa13.69□□□□□ -0.22
C4orf3-201ENST00000399075 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 BICC1Q9H694 974 aaKnown RBP13.68□□□□□ -0.22
C4orf3-201ENST00000399075 C19orf44Q9H6X5 657 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 G3BP1Q13283 466 aaKnown RBP eCLIP13.68□□□□□ -0.22
C4orf3-201ENST00000399075 ZSCAN31Q96LW9 406 aaPredicted RBP13.68□□□□□ -0.22
C4orf3-201ENST00000399075 COL15A1P39059 1388 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 DCCP43146 1447 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 SYCE3A1L190 88 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 PHF14O94880 888 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 SASH1O94885 1247 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 IGKV5-2P06315 115 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 PROSER2Q86WR7 435 aaPredicted RBP13.68□□□□□ -0.22
C4orf3-201ENST00000399075 ZSWIM6Q9HCJ5 1215 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
C4orf3-201ENST00000399075 CCDC171Q6TFL3 1326 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 PKD1L3Q7Z443 1732 aa13.68□□□□□ -0.22
C4orf3-201ENST00000399075 ZSCAN22P10073 491 aaPredicted RBP13.67□□□□□ -0.22
C4orf3-201ENST00000399075 PHKG2P15735 406 aa13.67□□□□□ -0.22
C4orf3-201ENST00000399075 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
C4orf3-201ENST00000399075 NEXNQ0ZGT2 675 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms