RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 CHPF2Q9P2E5 772 aa13.49□□□□□ -0.25
CYCSP55-201ENST00000399027 ZNF330Q9Y3S2 320 aaPredicted RBP13.49□□□□□ -0.25
CYCSP55-201ENST00000399027 KIAA1551Q9HCM1 1747 aa13.48□□□□□ -0.25
CYCSP55-201ENST00000399027 CCDC30Q5VVM6 783 aa13.48□□□□□ -0.25
CYCSP55-201ENST00000399027 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
CYCSP55-201ENST00000399027 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
CYCSP55-201ENST00000399027 ERVV-1B6SEH8 477 aa13.47□□□□□ -0.25
CYCSP55-201ENST00000399027 ANXA1P04083 346 aa13.47□□□□□ -0.25
CYCSP55-201ENST00000399027 POLD1P28340 1107 aa13.47□□□□□ -0.25
CYCSP55-201ENST00000399027 TM4SF1P30408 202 aa13.47□□□□□ -0.25
CYCSP55-201ENST00000399027 FKBP8Q14318 412 aa13.47□□□□□ -0.25
CYCSP55-201ENST00000399027 CLEC4GQ6UXB4 293 aa13.47□□□□□ -0.25
CYCSP55-201ENST00000399027 HYPKQ9NX55 129 aa13.47□□□□□ -0.25
CYCSP55-201ENST00000399027 MAP3K15Q6ZN16 1313 aa13.46□□□□□ -0.25
CYCSP55-201ENST00000399027 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
CYCSP55-201ENST00000399027 ANKRD31Q8N7Z5 1873 aa13.46□□□□□ -0.26
CYCSP55-201ENST00000399027 ATP10DQ9P241 1426 aa13.46□□□□□ -0.26
CYCSP55-201ENST00000399027 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
CYCSP55-201ENST00000399027 BRCA1P38398 1863 aaKnown RBP13.45□□□□□ -0.26
CYCSP55-201ENST00000399027 MMP10P09238 476 aa13.45□□□□□ -0.26
CYCSP55-201ENST00000399027 KIF6Q6ZMV9 814 aa13.45□□□□□ -0.26
CYCSP55-201ENST00000399027 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
CYCSP55-201ENST00000399027 ARXQ96QS3 562 aa13.45□□□□□ -0.26
CYCSP55-201ENST00000399027 TBC1D9BQ66K14 1250 aa13.44□□□□□ -0.26
CYCSP55-201ENST00000399027 XAGE3Q8WTP9 111 aa13.44□□□□□ -0.26
CYCSP55-201ENST00000399027 ZNF428Q96B54 188 aa13.44□□□□□ -0.26
CYCSP55-201ENST00000399027 STK31Q9BXU1 1019 aa13.44□□□□□ -0.26
CYCSP55-201ENST00000399027 ZNF652Q9Y2D9 606 aa13.44□□□□□ -0.26
CYCSP55-201ENST00000399027 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
CYCSP55-201ENST00000399027 POLRMTO00411 1230 aaKnown RBP13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 CT47B1P0C2W7 299 aaPredicted RBP13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 DDR1Q08345 913 aa13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 NFIXQ14938 502 aa13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 HLFQ16534 295 aa13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 C10orf71Q711Q0 1435 aa13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 PHAXQ9H814 394 aaKnown RBP13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 CARMIL3Q8ND23 1372 aa13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 LAMB2P55268 1798 aa13.43□□□□□ -0.26
CYCSP55-201ENST00000399027 ZBTB22O15209 634 aa13.42□□□□□ -0.26
CYCSP55-201ENST00000399027 PLBD2Q8NHP8 589 aa13.42□□□□□ -0.26
CYCSP55-201ENST00000399027 ZBTB3Q9H5J0 574 aa13.42□□□□□ -0.26
CYCSP55-201ENST00000399027 PARP3Q9Y6F1 533 aa13.42□□□□□ -0.26
CYCSP55-201ENST00000399027 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
CYCSP55-201ENST00000399027 AIMP1Q12904 312 aaKnown RBP13.41□□□□□ -0.26
CYCSP55-201ENST00000399027 ANKRD13DQ6ZTN6 518 aa13.41□□□□□ -0.26
CYCSP55-201ENST00000399027 PPP1R1BQ9UD71 204 aaPredicted RBP13.41□□□□□ -0.26
CYCSP55-201ENST00000399027 COL11A2P13942 1736 aaPredicted RBP13.4□□□□□ -0.26
CYCSP55-201ENST00000399027 DDX60Q8IY21 1712 aaKnown RBP13.4□□□□□ -0.26
CYCSP55-201ENST00000399027 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
CYCSP55-201ENST00000399027 ALDH1L2Q3SY69 923 aa13.4□□□□□ -0.26
CYCSP55-201ENST00000399027 ZNF34Q8IZ26 560 aa13.4□□□□□ -0.26
CYCSP55-201ENST00000399027 SETDB2Q96T68 719 aa13.4□□□□□ -0.26
CYCSP55-201ENST00000399027 IBTKQ9P2D0 1353 aaPredicted RBP13.4□□□□□ -0.26
CYCSP55-201ENST00000399027 SERPINB2P05120 415 aa13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 HSP90AB3PQ58FF7 597 aa13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 G2E3Q7L622 706 aa13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 FHDC1Q9C0D6 1143 aaPredicted RBP13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 NIP7Q9Y221 180 aaKnown RBP eCLIP13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 CD2APQ9Y5K6 639 aa13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 ADCY9O60503 1353 aa13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 TNRC6CQ9HCJ0 1690 aaKnown RBP13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 UBN2Q6ZU65 1347 aa13.39□□□□□ -0.27
CYCSP55-201ENST00000399027 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
CYCSP55-201ENST00000399027 FLIIQ13045 1269 aa13.38□□□□□ -0.27
CYCSP55-201ENST00000399027 TCIRG1Q13488 830 aa13.38□□□□□ -0.27
CYCSP55-201ENST00000399027 SYT17Q9BSW7 474 aa13.38□□□□□ -0.27
CYCSP55-201ENST00000399027 CACNA1SQ13698 1873 aa13.38□□□□□ -0.27
CYCSP55-201ENST00000399027 MYH3P11055 1940 aa13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 ARFGEF1Q9Y6D6 1849 aa13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 KSR2Q6VAB6 950 aa13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 RIC3Q7Z5B4 369 aa13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 SSH1Q8WYL5 1049 aa13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 RIC1Q4ADV7 1423 aa13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 SRCAPQ6ZRS2 3230 aa13.37□□□□□ -0.27
CYCSP55-201ENST00000399027 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
CYCSP55-201ENST00000399027 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
CYCSP55-201ENST00000399027 METTL22Q9BUU2 404 aaPredicted RBP13.36□□□□□ -0.27
CYCSP55-201ENST00000399027 RNF123Q5XPI4 1314 aa13.36□□□□□ -0.27
CYCSP55-201ENST00000399027 PI4KAP2A4QPH2 592 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 NTSR2O95665 410 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 GPTP24298 496 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 RARSP54136 660 aaKnown RBP13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 TRIM28Q13263 835 aaKnown RBP13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 FKBP5Q13451 457 aaPredicted RBP13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 SUSD4Q5VX71 490 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 TPTE2Q6XPS3 522 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 PPP1R42Q7Z4L9 355 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 NLRP10Q86W26 655 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 NBPF5PQ86XG9 351 aaPredicted RBP13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 PI4KAP1Q8N8J0 262 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 CNBD1Q8NA66 436 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 NYXQ9GZU5 481 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 MAP3K2Q9Y2U5 619 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms