RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 RIC3Q7Z5B4 369 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 PODXL2Q9NZ53 605 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 MEGF6O75095 1541 aa13.74□□□□□ -0.21
RCC1-204ENST00000398958 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
RCC1-204ENST00000398958 ZNF445P59923 1031 aa13.74□□□□□ -0.21
RCC1-204ENST00000398958 ATP8B2P98198 1209 aa13.74□□□□□ -0.21
RCC1-204ENST00000398958 ZSCAN23Q3MJ62 389 aa13.74□□□□□ -0.21
RCC1-204ENST00000398958 XAGE3Q8WTP9 111 aa13.74□□□□□ -0.21
RCC1-204ENST00000398958 SRCIN1Q9C0H9 1055 aa13.74□□□□□ -0.21
RCC1-204ENST00000398958 ZBTB3Q9H5J0 574 aa13.74□□□□□ -0.21
RCC1-204ENST00000398958 GNAI3P08754 354 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 PKP1Q13835 747 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 AMOTQ4VCS5 1084 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 RBSNQ9H1K0 784 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 IL25Q9H293 177 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 MED1Q15648 1581 aaPredicted RBP13.73□□□□□ -0.21
RCC1-204ENST00000398958 MX1P20591 662 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 IFNL2Q8IZJ0 200 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 MAP7D2Q96T17 732 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 MYD88Q99836 296 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 NOL7Q9UMY1 257 aaKnown RBP13.73□□□□□ -0.21
RCC1-204ENST00000398958 SPG7Q9UQ90 795 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 KIF1AQ12756 1690 aa13.73□□□□□ -0.21
RCC1-204ENST00000398958 UQCRHLA0A096LP55 91 aa13.72□□□□□ -0.21
RCC1-204ENST00000398958 UQCRHP07919 91 aa13.72□□□□□ -0.21
RCC1-204ENST00000398958 HS1BP3Q53T59 392 aa13.72□□□□□ -0.21
RCC1-204ENST00000398958 NDUFB9Q9Y6M9 179 aa13.72□□□□□ -0.21
RCC1-204ENST00000398958 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
RCC1-204ENST00000398958 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
RCC1-204ENST00000398958 ARID3AQ99856 593 aa13.72□□□□□ -0.21
RCC1-204ENST00000398958 SLC52A2Q9HAB3 445 aa13.72□□□□□ -0.21
RCC1-204ENST00000398958 ZGPATQ8N5A5 531 aaKnown RBP13.71□□□□□ -0.21
RCC1-204ENST00000398958 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.21
RCC1-204ENST00000398958 ASAP1Q9ULH1 1129 aa13.71□□□□□ -0.21
RCC1-204ENST00000398958 ZNF500O60304 480 aaPredicted RBP13.71□□□□□ -0.21
RCC1-204ENST00000398958 NUCB2P80303 420 aa13.71□□□□□ -0.21
RCC1-204ENST00000398958 LARP6Q9BRS8 491 aaKnown RBP13.71□□□□□ -0.21
RCC1-204ENST00000398958 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.21
RCC1-204ENST00000398958 LMBRD1Q9NUN5 540 aa13.71□□□□□ -0.21
RCC1-204ENST00000398958 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
RCC1-204ENST00000398958 ALS2Q96Q42 1657 aa13.71□□□□□ -0.21
RCC1-204ENST00000398958 TNS3Q68CZ2 1445 aa13.71□□□□□ -0.22
RCC1-204ENST00000398958 CEMIPQ8WUJ3 1361 aa13.71□□□□□ -0.22
RCC1-204ENST00000398958 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
RCC1-204ENST00000398958 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.7□□□□□ -0.22
RCC1-204ENST00000398958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.7□□□□□ -0.22
RCC1-204ENST00000398958 CASC1Q6TDU7 716 aa13.7□□□□□ -0.22
RCC1-204ENST00000398958 TPRNQ4KMQ1 711 aa13.7□□□□□ -0.22
RCC1-204ENST00000398958 BEND3Q5T5X7 828 aa13.7□□□□□ -0.22
RCC1-204ENST00000398958 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
RCC1-204ENST00000398958 PRDM4Q9UKN5 801 aa13.7□□□□□ -0.22
RCC1-204ENST00000398958 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
RCC1-204ENST00000398958 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
RCC1-204ENST00000398958 FOXD4L6Q3SYB3 417 aaPredicted RBP13.69□□□□□ -0.22
RCC1-204ENST00000398958 FOXD4L3Q6VB84 417 aaPredicted RBP13.69□□□□□ -0.22
RCC1-204ENST00000398958 PDLIM2Q96JY6 352 aa13.69□□□□□ -0.22
RCC1-204ENST00000398958 ERC2O15083 957 aa13.69□□□□□ -0.22
RCC1-204ENST00000398958 PRPF40AO75400 957 aaKnown RBP13.69□□□□□ -0.22
RCC1-204ENST00000398958 RABEP1Q15276 862 aa13.69□□□□□ -0.22
RCC1-204ENST00000398958 TTLL7Q6ZT98 887 aa13.69□□□□□ -0.22
RCC1-204ENST00000398958 UPF3BQ9BZI7 483 aaKnown RBP13.68□□□□□ -0.22
RCC1-204ENST00000398958 DBF4Q9UBU7 674 aaPredicted RBP13.68□□□□□ -0.22
RCC1-204ENST00000398958 ZKSCAN5Q9Y2L8 839 aa13.68□□□□□ -0.22
RCC1-204ENST00000398958 ADCY9O60503 1353 aa13.68□□□□□ -0.22
RCC1-204ENST00000398958 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 IL2RBP14784 551 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 NEK4P51957 841 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 UBE3BQ7Z3V4 1068 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 SYNE4Q8N205 404 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 C8orf37Q96NL8 207 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 LRRC37A3O60309 1634 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 SLIT3O75094 1523 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 UBAP1LF5GYI3 381 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 GPTP24298 496 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 RHPN1Q8TCX5 695 aa13.67□□□□□ -0.22
RCC1-204ENST00000398958 KDM6AO15550 1401 aaPredicted RBP13.66□□□□□ -0.22
RCC1-204ENST00000398958 CCDC8Q9H0W5 538 aaPredicted RBP13.66□□□□□ -0.22
RCC1-204ENST00000398958 CYP2E1P05181 493 aaPredicted RBP13.66□□□□□ -0.22
RCC1-204ENST00000398958 ESYT1Q9BSJ8 1104 aa13.66□□□□□ -0.22
RCC1-204ENST00000398958 SALL3Q9BXA9 1300 aa13.66□□□□□ -0.22
RCC1-204ENST00000398958 DYNC1I1O14576 645 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 CHMLP26374 656 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 PDIA6Q15084 440 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 EPHA10Q5JZY3 1008 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 GPT2Q8TD30 523 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 SSH3Q8TE77 659 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 BICC1Q9H694 974 aaKnown RBP13.65□□□□□ -0.22
RCC1-204ENST00000398958 LTBP4Q8N2S1 1624 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 WDR17Q8IZU2 1322 aa13.65□□□□□ -0.22
RCC1-204ENST00000398958 REC8O95072 547 aa13.64□□□□□ -0.23
RCC1-204ENST00000398958 CHGBP05060 677 aa13.64□□□□□ -0.23
RCC1-204ENST00000398958 SYCE3A1L190 88 aa13.64□□□□□ -0.23
RCC1-204ENST00000398958 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
RCC1-204ENST00000398958 DCAF5Q96JK2 942 aa13.64□□□□□ -0.23
RCC1-204ENST00000398958 CCDC39Q9UFE4 941 aa13.64□□□□□ -0.23
RCC1-204ENST00000398958 IGKV5-2P06315 115 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 CPA1P15085 419 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms