RNA–Protein interactions for RNA: ENST00000398795.6

TNFSF11-203, Transcript of TNF superfamily member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF11, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-203ENST00000398795 GPATCH3Q96I76 525 aa23.65■■□□□ 1.38
TNFSF11-203ENST00000398795 TM6SF1Q9BZW5 370 aa23.65■■□□□ 1.38
TNFSF11-203ENST00000398795 DIAPH3Q9NSV4 1193 aa23.65■■□□□ 1.38
TNFSF11-203ENST00000398795 LMO7Q8WWI1 1683 aa23.65■■□□□ 1.38
TNFSF11-203ENST00000398795 OS9Q13438 667 aaPredicted RBP23.64■■□□□ 1.38
TNFSF11-203ENST00000398795 GLIPR1L2Q4G1C9 344 aa23.64■■□□□ 1.38
TNFSF11-203ENST00000398795 AMOTQ4VCS5 1084 aa23.64■■□□□ 1.38
TNFSF11-203ENST00000398795 PLEKHO1Q53GL0 409 aaPredicted RBP23.64■■□□□ 1.38
TNFSF11-203ENST00000398795 ECHDC1Q9NTX5 307 aa23.64■■□□□ 1.38
TNFSF11-203ENST00000398795 KCNQ3O43525 872 aa23.64■■□□□ 1.37
TNFSF11-203ENST00000398795 LTN1O94822 1766 aa23.64■■□□□ 1.37
TNFSF11-203ENST00000398795 PHRF1Q9P1Y6 1649 aaKnown RBP23.63■■□□□ 1.37
TNFSF11-203ENST00000398795 UBE2HP62256 183 aa23.63■■□□□ 1.37
TNFSF11-203ENST00000398795 VPS53Q5VIR6 699 aa23.63■■□□□ 1.37
TNFSF11-203ENST00000398795 SMC3Q9UQE7 1217 aa23.63■■□□□ 1.37
TNFSF11-203ENST00000398795 SYT1P21579 422 aa23.62■■□□□ 1.37
TNFSF11-203ENST00000398795 ZNF530Q6P9A1 599 aaPredicted RBP23.62■■□□□ 1.37
TNFSF11-203ENST00000398795 ZSCAN31Q96LW9 406 aaPredicted RBP23.62■■□□□ 1.37
TNFSF11-203ENST00000398795 HYPKQ9NX55 129 aa23.62■■□□□ 1.37
TNFSF11-203ENST00000398795 SPG7Q9UQ90 795 aa23.62■■□□□ 1.37
TNFSF11-203ENST00000398795 F13A1P00488 732 aa23.62■■□□□ 1.37
TNFSF11-203ENST00000398795 SH2B1Q9NRF2 756 aaPredicted RBP23.62■■□□□ 1.37
TNFSF11-203ENST00000398795 FOXD4L6Q3SYB3 417 aaPredicted RBP23.61■■□□□ 1.37
TNFSF11-203ENST00000398795 FOXD4L3Q6VB84 417 aaPredicted RBP23.61■■□□□ 1.37
TNFSF11-203ENST00000398795 HEG1Q9ULI3 1381 aa23.61■■□□□ 1.37
TNFSF11-203ENST00000398795 CASTP20810 708 aaKnown RBP23.61■■□□□ 1.37
TNFSF11-203ENST00000398795 KSR2Q6VAB6 950 aa23.61■■□□□ 1.37
TNFSF11-203ENST00000398795 CNPY2Q9Y2B0 182 aa23.61■■□□□ 1.37
TNFSF11-203ENST00000398795 XPCQ01831 940 aaPredicted RBP23.6■■□□□ 1.37
TNFSF11-203ENST00000398795 EVI5LQ96CN4 794 aa23.6■■□□□ 1.37
TNFSF11-203ENST00000398795 ZSWIM6Q9HCJ5 1215 aa23.6■■□□□ 1.37
TNFSF11-203ENST00000398795 C9orf78Q9NZ63 289 aaPredicted RBP23.59■■□□□ 1.37
TNFSF11-203ENST00000398795 MAP3K2Q9Y2U5 619 aa23.59■■□□□ 1.37
TNFSF11-203ENST00000398795 RNMTO43148 476 aaKnown RBP23.59■■□□□ 1.37
TNFSF11-203ENST00000398795 IFIT2P09913 472 aaKnown RBP23.59■■□□□ 1.37
TNFSF11-203ENST00000398795 PDRG1Q9NUG6 133 aa23.59■■□□□ 1.37
TNFSF11-203ENST00000398795 FER1L4A9Z1Z3 1794 aa23.58■■□□□ 1.37
TNFSF11-203ENST00000398795 ANXA1P04083 346 aa23.58■■□□□ 1.37
TNFSF11-203ENST00000398795 GIGYF1O75420 1035 aaPredicted RBP23.58■■□□□ 1.36
TNFSF11-203ENST00000398795 PDIA4P13667 645 aaKnown RBP23.58■■□□□ 1.36
TNFSF11-203ENST00000398795 R3HCC1Q9Y3T6 440 aaKnown RBP23.58■■□□□ 1.36
TNFSF11-203ENST00000398795 UTYO14607 1347 aa23.57■■□□□ 1.36
TNFSF11-203ENST00000398795 HIP1O00291 1037 aa23.57■■□□□ 1.36
TNFSF11-203ENST00000398795 PTH1RQ03431 593 aa23.57■■□□□ 1.36
TNFSF11-203ENST00000398795 C1orf141Q5JVX7 400 aa23.57■■□□□ 1.36
TNFSF11-203ENST00000398795 MPRIPQ6WCQ1 1025 aa23.57■■□□□ 1.36
TNFSF11-203ENST00000398795 CYP46A1Q9Y6A2 500 aa23.57■■□□□ 1.36
TNFSF11-203ENST00000398795 JAKMIP1Q96N16 626 aaKnown RBP23.57■■□□□ 1.36
TNFSF11-203ENST00000398795 SNRKQ9NRH2 765 aa23.57■■□□□ 1.36
TNFSF11-203ENST00000398795 LMTK3Q96Q04 1460 aa23.56■■□□□ 1.36
TNFSF11-203ENST00000398795 PTMAP06454 111 aaKnown RBP23.56■■□□□ 1.36
TNFSF11-203ENST00000398795 NECTIN1Q15223 517 aa23.56■■□□□ 1.36
TNFSF11-203ENST00000398795 PDCL3Q9H2J4 239 aa23.56■■□□□ 1.36
TNFSF11-203ENST00000398795 CCDC171Q6TFL3 1326 aa23.56■■□□□ 1.36
TNFSF11-203ENST00000398795 PRPF40BQ6NWY9 871 aaKnown RBP23.55■■□□□ 1.36
TNFSF11-203ENST00000398795 LINS1Q8NG48 757 aa23.55■■□□□ 1.36
TNFSF11-203ENST00000398795 LARGE1O95461 756 aa23.55■■□□□ 1.36
TNFSF11-203ENST00000398795 ZKSCAN1P17029 563 aaPredicted RBP23.55■■□□□ 1.36
TNFSF11-203ENST00000398795 PSME1Q06323 249 aa23.55■■□□□ 1.36
TNFSF11-203ENST00000398795 MTMR6Q9Y217 621 aa23.55■■□□□ 1.36
TNFSF11-203ENST00000398795 GJB2P29033 226 aa23.54■■□□□ 1.36
TNFSF11-203ENST00000398795 LRRC59Q96AG4 307 aaKnown RBP23.54■■□□□ 1.36
TNFSF11-203ENST00000398795 PXDNQ92626 1479 aa23.54■■□□□ 1.36
TNFSF11-203ENST00000398795 KIAA2012Q0VF49 1180 aa23.54■■□□□ 1.36
TNFSF11-203ENST00000398795 ADCK5Q3MIX3 580 aa23.54■■□□□ 1.36
TNFSF11-203ENST00000398795 AACSQ86V21 672 aa23.54■■□□□ 1.36
TNFSF11-203ENST00000398795 CCDC83Q8IWF9 413 aa23.54■■□□□ 1.36
TNFSF11-203ENST00000398795 CPA1P15085 419 aa23.53■■□□□ 1.36
TNFSF11-203ENST00000398795 GRM8O00222 908 aa23.52■■□□□ 1.36
TNFSF11-203ENST00000398795 PROSER3Q2NL68 480 aa23.52■■□□□ 1.36
TNFSF11-203ENST00000398795 LARP6Q9BRS8 491 aaKnown RBP23.52■■□□□ 1.36
TNFSF11-203ENST00000398795 PA2G4Q9UQ80 394 aaKnown RBP23.52■■□□□ 1.36
TNFSF11-203ENST00000398795 DDX58O95786 925 aaKnown RBP23.52■■□□□ 1.36
TNFSF11-203ENST00000398795 MAP4K1Q92918 833 aa23.52■■□□□ 1.36
TNFSF11-203ENST00000398795 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.52■■□□□ 1.36
TNFSF11-203ENST00000398795 FIBPO43427 364 aa23.51■■□□□ 1.35
TNFSF11-203ENST00000398795 CWF19L2Q2TBE0 894 aaKnown RBP23.51■■□□□ 1.35
TNFSF11-203ENST00000398795 ARHGEF25Q86VW2 580 aa23.51■■□□□ 1.35
TNFSF11-203ENST00000398795 PSMA5P28066 241 aa23.51■■□□□ 1.35
TNFSF11-203ENST00000398795 CREB3L3Q68CJ9 461 aa23.51■■□□□ 1.35
TNFSF11-203ENST00000398795 FUCA2Q9BTY2 467 aa23.51■■□□□ 1.35
TNFSF11-203ENST00000398795 RBM8AQ9Y5S9 174 aaKnown RBP23.51■■□□□ 1.35
TNFSF11-203ENST00000398795 SLIT3O75094 1523 aa23.51■■□□□ 1.35
TNFSF11-203ENST00000398795 ST3GAL1Q11201 340 aa23.5■■□□□ 1.35
TNFSF11-203ENST00000398795 G3BP1Q13283 466 aaKnown RBP eCLIP23.5■■□□□ 1.35
TNFSF11-203ENST00000398795 ESCO1Q5FWF5 840 aa23.5■■□□□ 1.35
TNFSF11-203ENST00000398795 SASS6Q6UVJ0 657 aa23.5■■□□□ 1.35
TNFSF11-203ENST00000398795 SUCLG2Q96I99 432 aa23.5■■□□□ 1.35
TNFSF11-203ENST00000398795 DDX21Q9NR30 783 aaKnown RBP eCLIP23.5■■□□□ 1.35
TNFSF11-203ENST00000398795 USP25Q9UHP3 1055 aa23.5■■□□□ 1.35
TNFSF11-203ENST00000398795 SASH1O94885 1247 aa23.49■■□□□ 1.35
TNFSF11-203ENST00000398795 ME3Q16798 604 aa23.49■■□□□ 1.35
TNFSF11-203ENST00000398795 KAZALD1Q96I82 304 aa23.49■■□□□ 1.35
TNFSF11-203ENST00000398795 ZBTB7CA1YPR0 619 aa23.48■■□□□ 1.35
TNFSF11-203ENST00000398795 GCP02774 474 aa23.48■■□□□ 1.35
TNFSF11-203ENST00000398795 HCLS1P14317 486 aaPredicted RBP23.48■■□□□ 1.35
TNFSF11-203ENST00000398795 DNM1Q05193 864 aaKnown RBP23.48■■□□□ 1.35
TNFSF11-203ENST00000398795 EAF2Q96CJ1 260 aaPredicted RBP23.48■■□□□ 1.35
TNFSF11-203ENST00000398795 MAP7D2Q96T17 732 aa23.48■■□□□ 1.35
TNFSF11-203ENST00000398795 UQCRHLA0A096LP55 91 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms