RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 PDE4BQ07343 736 aa18.84■□□□□ 0.61
PCDHA12-201ENST00000398631 ZNF397Q8NF99 534 aaPredicted RBP18.84■□□□□ 0.61
PCDHA12-201ENST00000398631 RHPN1Q8TCX5 695 aa18.84■□□□□ 0.61
PCDHA12-201ENST00000398631 KIF5BP33176 963 aa18.83■□□□□ 0.61
PCDHA12-201ENST00000398631 CCT2P78371 535 aaKnown RBP18.83■□□□□ 0.61
PCDHA12-201ENST00000398631 XAGE3Q8WTP9 111 aa18.83■□□□□ 0.61
PCDHA12-201ENST00000398631 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.6
PCDHA12-201ENST00000398631 RIMS2Q9UQ26 1411 aa18.83■□□□□ 0.6
PCDHA12-201ENST00000398631 TBC1D9Q6ZT07 1266 aa18.83■□□□□ 0.6
PCDHA12-201ENST00000398631 IARSP41252 1262 aaKnown RBP18.83■□□□□ 0.6
PCDHA12-201ENST00000398631 IQCEQ6IPM2 695 aa18.83■□□□□ 0.6
PCDHA12-201ENST00000398631 SKAP1Q86WV1 359 aa18.83■□□□□ 0.6
PCDHA12-201ENST00000398631 HMG20BQ9P0W2 317 aa18.83■□□□□ 0.6
PCDHA12-201ENST00000398631 CHPF2Q9P2E5 772 aa18.83■□□□□ 0.6
PCDHA12-201ENST00000398631 CCDC183Q5T5S1 534 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 KIAA1328Q86T90 577 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 CCDC12Q8WUD4 166 aaPredicted RBP18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 TMEM67Q5HYA8 995 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 AKAP4Q5JQC9 854 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 KLHL10Q6JEL2 608 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 TSPY2A6NKD2 308 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 PPP4R3AQ6IN85 833 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 COPS6Q7L5N1 327 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 TSG101Q99816 390 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 POTEJP0CG39 1038 aa18.82■□□□□ 0.6
PCDHA12-201ENST00000398631 H0YHG0 523 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 TAF4BQ92750 862 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 FEZ1Q99689 392 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 NUP160Q12769 1436 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 SFPQP23246 707 aaKnown RBP eCLIP18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 MFSD6Q6ZSS7 791 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 SMARCC1Q92922 1105 aaPredicted RBP18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 EHMT1Q9H9B1 1298 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 CTAGE5O15320 804 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 KIF20AO95235 890 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 FKBP15Q5T1M5 1219 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 WDR78Q5VTH9 848 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 HLA-DOAP06340 250 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 TRIM21P19474 475 aaKnown RBP18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 TTLL12Q14166 644 aaPredicted RBP18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 TTC22Q5TAA0 569 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 NEK1Q96PY6 1258 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 CABP5Q9NP86 173 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
PCDHA12-201ENST00000398631 NCOA7Q8NI08 942 aa18.8■□□□□ 0.6
PCDHA12-201ENST00000398631 UBAP1LF5GYI3 381 aa18.8■□□□□ 0.6
PCDHA12-201ENST00000398631 ST5P78524 1137 aa18.8■□□□□ 0.6
PCDHA12-201ENST00000398631 RAPGEF6Q8TEU7 1601 aa18.8■□□□□ 0.6
PCDHA12-201ENST00000398631 ZNF622Q969S3 477 aaKnown RBP eCLIP18.8■□□□□ 0.6
PCDHA12-201ENST00000398631 MEIS3Q99687 375 aa18.8■□□□□ 0.6
PCDHA12-201ENST00000398631 HAND2P61296 217 aa18.8■□□□□ 0.6
PCDHA12-201ENST00000398631 SCLT1Q96NL6 688 aa18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 ZFYP08048 801 aaPredicted RBP18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 SLC39A6Q13433 755 aa18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 PUS7Q96PZ0 661 aaKnown RBP18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 FGFR1OPO95684 399 aaKnown RBP18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 EIF4A2Q14240 407 aaKnown RBP18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 TBC1D2Q9BYX2 928 aa18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 ORC3Q9UBD5 711 aaPredicted RBP18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 ANKRD18AQ8IVF6 992 aa18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 CRNKL1Q9BZJ0 848 aaKnown RBP18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 UBA5Q9GZZ9 404 aa18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 KAT14Q9H8E8 782 aa18.79■□□□□ 0.6
PCDHA12-201ENST00000398631 KSR2Q6VAB6 950 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 MICU3Q86XE3 530 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 CNNM3Q8NE01 707 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 SEPT7Q16181 437 aaKnown RBP18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 GRM8O00222 908 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 HDAC1Q13547 482 aaPredicted RBP18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 ATP2B3Q16720 1220 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 C19orf44Q9H6X5 657 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 CETN2P41208 172 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 DDB1Q16531 1140 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 TSHZ3Q63HK5 1081 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 SETDB2Q96T68 719 aa18.78■□□□□ 0.6
PCDHA12-201ENST00000398631 BAG4O95429 457 aaKnown RBP18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 ATP6V1AP38606 617 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 NLRP3Q96P20 1036 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 DDX19AQ9NUU7 478 aaKnown RBP18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 ASXL1Q8IXJ9 1541 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 GSTO1P78417 241 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 CCDC191Q8NCU4 936 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 IL27Q8NEV9 243 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 ESPNB1AK53 854 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 SSFA2P28290 1259 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 SPA17Q15506 151 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 FSIP1Q8NA03 581 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 TCP11L1Q9NUJ3 509 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 POLKQ9UBT6 870 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 FLT4P35916 1363 aa18.77■□□□□ 0.6
PCDHA12-201ENST00000398631 LARP6Q9BRS8 491 aaKnown RBP18.77■□□□□ 0.59
PCDHA12-201ENST00000398631 DNAI2Q9GZS0 605 aa18.77■□□□□ 0.59
PCDHA12-201ENST00000398631 EIF3JO75822 258 aaKnown RBP18.77■□□□□ 0.59
PCDHA12-201ENST00000398631 METAP2P50579 478 aaKnown RBP eCLIP18.77■□□□□ 0.59
PCDHA12-201ENST00000398631 JAKMIP3Q5VZ66 844 aa18.77■□□□□ 0.59
PCDHA12-201ENST00000398631 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms