RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 MMP10P09238 476 aa32.66■■■□□ 2.82
TMEM55B-202ENST00000398020 COPS6Q7L5N1 327 aa32.66■■■□□ 2.82
TMEM55B-202ENST00000398020 KIF6Q6ZMV9 814 aa32.66■■■□□ 2.82
TMEM55B-202ENST00000398020 ZBTB3Q9H5J0 574 aa32.66■■■□□ 2.82
TMEM55B-202ENST00000398020 HYPKQ9NX55 129 aa32.65■■■□□ 2.82
TMEM55B-202ENST00000398020 STK31Q9BXU1 1019 aa32.64■■■□□ 2.82
TMEM55B-202ENST00000398020 CHMP4AQ9BY43 222 aa32.64■■■□□ 2.82
TMEM55B-202ENST00000398020 PHAXQ9H814 394 aaKnown RBP32.64■■■□□ 2.82
TMEM55B-202ENST00000398020 HLFQ16534 295 aa32.63■■■□□ 2.81
TMEM55B-202ENST00000398020 BICDL1Q6ZP65 573 aa32.63■■■□□ 2.81
TMEM55B-202ENST00000398020 YTHDC1Q96MU7 727 aaKnown RBP32.62■■■□□ 2.81
TMEM55B-202ENST00000398020 PPP1R1BQ9UD71 204 aaPredicted RBP32.62■■■□□ 2.81
TMEM55B-202ENST00000398020 MAP3K15Q6ZN16 1313 aa32.62■■■□□ 2.81
TMEM55B-202ENST00000398020 TBC1D9BQ66K14 1250 aa32.62■■■□□ 2.81
TMEM55B-202ENST00000398020 SLC4A2P04920 1241 aa32.6■■■□□ 2.81
TMEM55B-202ENST00000398020 NFIXQ14938 502 aa32.6■■■□□ 2.81
TMEM55B-202ENST00000398020 DDR1Q08345 913 aa32.59■■■□□ 2.81
TMEM55B-202ENST00000398020 TM4SF1P30408 202 aa32.59■■■□□ 2.81
TMEM55B-202ENST00000398020 ZNF652Q9Y2D9 606 aa32.59■■■□□ 2.81
TMEM55B-202ENST00000398020 ERVV-1B6SEH8 477 aa32.57■■■□□ 2.8
TMEM55B-202ENST00000398020 NUP98P52948 1817 aa32.57■■■□□ 2.8
TMEM55B-202ENST00000398020 CLEC4GQ6UXB4 293 aa32.56■■■□□ 2.8
TMEM55B-202ENST00000398020 G2E3Q7L622 706 aa32.56■■■□□ 2.8
TMEM55B-202ENST00000398020 PARP3Q9Y6F1 533 aa32.56■■■□□ 2.8
TMEM55B-202ENST00000398020 KLHL34Q8N239 644 aa32.56■■■□□ 2.8
TMEM55B-202ENST00000398020 POLRMTO00411 1230 aaKnown RBP32.55■■■□□ 2.8
TMEM55B-202ENST00000398020 GIGYF2Q6Y7W6 1299 aaKnown RBP32.53■■■□□ 2.8
TMEM55B-202ENST00000398020 ANKRD13DQ6ZTN6 518 aa32.53■■■□□ 2.8
TMEM55B-202ENST00000398020 SETDB2Q96T68 719 aa32.53■■■□□ 2.8
TMEM55B-202ENST00000398020 NIP7Q9Y221 180 aaKnown RBP eCLIP32.53■■■□□ 2.8
TMEM55B-202ENST00000398020 PLBD2Q8NHP8 589 aa32.52■■■□□ 2.8
TMEM55B-202ENST00000398020 GPTP24298 496 aa32.51■■■□□ 2.79
TMEM55B-202ENST00000398020 BCL2L13Q9BXK5 485 aa32.51■■■□□ 2.79
TMEM55B-202ENST00000398020 RGL2O15211 777 aa32.5■■■□□ 2.79
TMEM55B-202ENST00000398020 FHDC1Q9C0D6 1143 aaPredicted RBP32.5■■■□□ 2.79
TMEM55B-202ENST00000398020 SERPINB2P05120 415 aa32.5■■■□□ 2.79
TMEM55B-202ENST00000398020 CARMIL3Q8ND23 1372 aa32.49■■■□□ 2.79
TMEM55B-202ENST00000398020 FAM177BA6PVY3 158 aa32.49■■■□□ 2.79
TMEM55B-202ENST00000398020 FLIIQ13045 1269 aa32.49■■■□□ 2.79
TMEM55B-202ENST00000398020 RIC3Q7Z5B4 369 aa32.49■■■□□ 2.79
TMEM55B-202ENST00000398020 SSH1Q8WYL5 1049 aa32.49■■■□□ 2.79
TMEM55B-202ENST00000398020 AFDNP55196 1824 aaKnown RBP32.49■■■□□ 2.79
TMEM55B-202ENST00000398020 CACNA1FO60840 1977 aa32.49■■■□□ 2.79
TMEM55B-202ENST00000398020 ARFGEF2Q9Y6D5 1785 aa32.48■■■□□ 2.79
TMEM55B-202ENST00000398020 ATP10DQ9P241 1426 aa32.48■■■□□ 2.79
TMEM55B-202ENST00000398020 DDX58O95786 925 aaKnown RBP32.46■■■□□ 2.79
TMEM55B-202ENST00000398020 CT47B1P0C2W7 299 aaPredicted RBP32.46■■■□□ 2.79
TMEM55B-202ENST00000398020 UBN2Q6ZU65 1347 aa32.46■■■□□ 2.79
TMEM55B-202ENST00000398020 PI4KAP2A4QPH2 592 aa32.45■■■□□ 2.79
TMEM55B-202ENST00000398020 FKBP5Q13451 457 aaPredicted RBP32.45■■■□□ 2.79
TMEM55B-202ENST00000398020 ZNF34Q8IZ26 560 aa32.45■■■□□ 2.79
TMEM55B-202ENST00000398020 PI4KAP1Q8N8J0 262 aa32.45■■■□□ 2.79
TMEM55B-202ENST00000398020 ZNF428Q96B54 188 aa32.45■■■□□ 2.79
TMEM55B-202ENST00000398020 CCDC24Q8N4L8 307 aa32.44■■■□□ 2.78
TMEM55B-202ENST00000398020 MRPL50Q8N5N7 158 aaKnown RBP32.44■■■□□ 2.78
TMEM55B-202ENST00000398020 ADCY9O60503 1353 aa32.44■■■□□ 2.78
TMEM55B-202ENST00000398020 ANKRD36CQ5JPF3 1778 aa32.44■■■□□ 2.78
TMEM55B-202ENST00000398020 NRXN2Q9P2S2 1712 aa32.44■■■□□ 2.78
TMEM55B-202ENST00000398020 TCIRG1Q13488 830 aa32.43■■■□□ 2.78
TMEM55B-202ENST00000398020 SMC4Q9NTJ3 1288 aa32.43■■■□□ 2.78
TMEM55B-202ENST00000398020 MAP3K2Q9Y2U5 619 aa32.43■■■□□ 2.78
TMEM55B-202ENST00000398020 HSP90AB3PQ58FF7 597 aa32.43■■■□□ 2.78
TMEM55B-202ENST00000398020 KSR2Q6VAB6 950 aa32.43■■■□□ 2.78
TMEM55B-202ENST00000398020 NBPF5PQ86XG9 351 aaPredicted RBP32.43■■■□□ 2.78
TMEM55B-202ENST00000398020 ATP5J2-PTCD1G3V325 749 aa32.42■■■□□ 2.78
TMEM55B-202ENST00000398020 NPHP1O15259 732 aa32.42■■■□□ 2.78
TMEM55B-202ENST00000398020 ALDH1L2Q3SY69 923 aa32.42■■■□□ 2.78
TMEM55B-202ENST00000398020 SYT17Q9BSW7 474 aa32.42■■■□□ 2.78
TMEM55B-202ENST00000398020 C10orf71Q711Q0 1435 aa32.41■■■□□ 2.78
TMEM55B-202ENST00000398020 PRR5LQ6MZQ0 368 aa32.41■■■□□ 2.78
TMEM55B-202ENST00000398020 CNBD1Q8NA66 436 aa32.4■■■□□ 2.78
TMEM55B-202ENST00000398020 MYD88Q99836 296 aa32.4■■■□□ 2.78
TMEM55B-202ENST00000398020 RARSP54136 660 aaKnown RBP32.4■■■□□ 2.78
TMEM55B-202ENST00000398020 SUSD4Q5VX71 490 aa32.4■■■□□ 2.78
TMEM55B-202ENST00000398020 NLGN2Q8NFZ4 835 aa32.4■■■□□ 2.78
TMEM55B-202ENST00000398020 GOLGB1Q14789 3259 aaKnown RBP32.39■■■□□ 2.78
TMEM55B-202ENST00000398020 CD2APQ9Y5K6 639 aa32.38■■■□□ 2.77
TMEM55B-202ENST00000398020 NLRP10Q86W26 655 aa32.37■■■□□ 2.77
TMEM55B-202ENST00000398020 METTL22Q9BUU2 404 aaPredicted RBP32.37■■■□□ 2.77
TMEM55B-202ENST00000398020 F6X3S4 739 aa32.37■■■□□ 2.77
TMEM55B-202ENST00000398020 PARP10Q53GL7 1025 aa32.37■■■□□ 2.77
TMEM55B-202ENST00000398020 TPTE2Q6XPS3 522 aa32.37■■■□□ 2.77
TMEM55B-202ENST00000398020 NUTM1Q86Y26 1132 aa32.37■■■□□ 2.77
TMEM55B-202ENST00000398020 ISCA1Q9BUE6 129 aa32.37■■■□□ 2.77
TMEM55B-202ENST00000398020 KIF13BQ9NQT8 1826 aa32.36■■■□□ 2.77
TMEM55B-202ENST00000398020 GTF2E1P29083 439 aaPredicted RBP32.35■■■□□ 2.77
TMEM55B-202ENST00000398020 NTSR2O95665 410 aa32.34■■■□□ 2.77
TMEM55B-202ENST00000398020 ST5P78524 1137 aa32.34■■■□□ 2.77
TMEM55B-202ENST00000398020 PPP1R42Q7Z4L9 355 aa32.34■■■□□ 2.77
TMEM55B-202ENST00000398020 DNAAF4Q8WXU2 420 aa32.34■■■□□ 2.77
TMEM55B-202ENST00000398020 BCAR3O75815 825 aa32.33■■■□□ 2.77
TMEM55B-202ENST00000398020 NYXQ9GZU5 481 aa32.33■■■□□ 2.77
TMEM55B-202ENST00000398020 ERFEQ4G0M1 354 aa32.32■■■□□ 2.76
TMEM55B-202ENST00000398020 UTP14AQ9BVJ6 771 aaKnown RBP32.32■■■□□ 2.76
TMEM55B-202ENST00000398020 ANKRD31Q8N7Z5 1873 aa32.31■■■□□ 2.76
TMEM55B-202ENST00000398020 IGKV5-2P06315 115 aa32.31■■■□□ 2.76
TMEM55B-202ENST00000398020 NEXNQ0ZGT2 675 aa32.31■■■□□ 2.76
TMEM55B-202ENST00000398020 N4BP2Q86UW6 1770 aaPredicted RBP32.31■■■□□ 2.76
TMEM55B-202ENST00000398020 CWF19L2Q2TBE0 894 aaKnown RBP32.31■■■□□ 2.76
TMEM55B-202ENST00000398020 TRMT112Q9UI30 125 aaKnown RBP32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms