RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PLBD2Q8NHP8 589 aa24.55■■□□□ 1.52
PDLIM2-205ENST00000397761 MEIS3Q99687 375 aa24.55■■□□□ 1.52
PDLIM2-205ENST00000397761 HDAC1Q13547 482 aaPredicted RBP24.54■■□□□ 1.52
PDLIM2-205ENST00000397761 IGHDP01880 384 aa24.53■■□□□ 1.52
PDLIM2-205ENST00000397761 LINS1Q8NG48 757 aa24.53■■□□□ 1.52
PDLIM2-205ENST00000397761 METTL22Q9BUU2 404 aaPredicted RBP24.53■■□□□ 1.52
PDLIM2-205ENST00000397761 USP44Q9H0E7 712 aa24.53■■□□□ 1.52
PDLIM2-205ENST00000397761 RIC3Q7Z5B4 369 aa24.52■■□□□ 1.52
PDLIM2-205ENST00000397761 GNAI3P08754 354 aa24.51■■□□□ 1.51
PDLIM2-205ENST00000397761 IL6STP40189 918 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-205ENST00000397761 RWDD1Q9H446 243 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-205ENST00000397761 INTS5Q6P9B9 1019 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-205ENST00000397761 TTLL7Q6ZT98 887 aa24.51■■□□□ 1.51
PDLIM2-205ENST00000397761 CCDC87Q9NVE4 849 aa24.51■■□□□ 1.51
PDLIM2-205ENST00000397761 ZBTB1Q9Y2K1 713 aa24.51■■□□□ 1.51
PDLIM2-205ENST00000397761 BCORQ6W2J9 1755 aa24.5■■□□□ 1.51
PDLIM2-205ENST00000397761 TNS1Q9HBL0 1735 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-205ENST00000397761 IGKV5-2P06315 115 aa24.49■■□□□ 1.51
PDLIM2-205ENST00000397761 CRKLP46109 303 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-205ENST00000397761 NEXNQ0ZGT2 675 aa24.48■■□□□ 1.51
PDLIM2-205ENST00000397761 C1orf115Q9H7X2 142 aa24.48■■□□□ 1.51
PDLIM2-205ENST00000397761 UTYO14607 1347 aa24.48■■□□□ 1.51
PDLIM2-205ENST00000397761 EIF5P55010 431 aaKnown RBP24.47■■□□□ 1.51
PDLIM2-205ENST00000397761 SIRT2Q8IXJ6 389 aa24.47■■□□□ 1.51
PDLIM2-205ENST00000397761 RPAP2Q8IXW5 612 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-205ENST00000397761 CNTNAP4Q9C0A0 1308 aa24.47■■□□□ 1.51
PDLIM2-205ENST00000397761 RGPD3A6NKT7 1758 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-205ENST00000397761 RGPD4Q7Z3J3 1758 aa24.47■■□□□ 1.51
PDLIM2-205ENST00000397761 C4BP0C0L5 1744 aa24.46■■□□□ 1.51
PDLIM2-205ENST00000397761 NEURL1BA8MQ27 555 aa24.46■■□□□ 1.51
PDLIM2-205ENST00000397761 GNAI2P04899 355 aa24.46■■□□□ 1.51
PDLIM2-205ENST00000397761 ANKRD44Q8N8A2 993 aa24.46■■□□□ 1.51
PDLIM2-205ENST00000397761 CWF19L2Q2TBE0 894 aaKnown RBP24.45■■□□□ 1.51
PDLIM2-205ENST00000397761 LINC00116Q8NCU8 138 aa24.45■■□□□ 1.51
PDLIM2-205ENST00000397761 MAP3K15Q6ZN16 1313 aa24.45■■□□□ 1.5
PDLIM2-205ENST00000397761 CEP85Q6P2H3 762 aa24.45■■□□□ 1.5
PDLIM2-205ENST00000397761 MYD88Q99836 296 aa24.45■■□□□ 1.5
PDLIM2-205ENST00000397761 UBTFL1P0CB47 393 aaPredicted RBP24.44■■□□□ 1.5
PDLIM2-205ENST00000397761 RC3H1Q5TC82 1133 aaKnown RBP24.44■■□□□ 1.5
PDLIM2-205ENST00000397761 NBPF7P0C2Y1 421 aaPredicted RBP24.43■■□□□ 1.5
PDLIM2-205ENST00000397761 GCKRQ14397 625 aa24.43■■□□□ 1.5
PDLIM2-205ENST00000397761 KIF6Q6ZMV9 814 aa24.43■■□□□ 1.5
PDLIM2-205ENST00000397761 SMC5Q8IY18 1101 aa24.43■■□□□ 1.5
PDLIM2-205ENST00000397761 CCNL1Q9UK58 526 aaPredicted RBP24.43■■□□□ 1.5
PDLIM2-205ENST00000397761 UBR3Q6ZT12 1888 aa24.42■■□□□ 1.5
PDLIM2-205ENST00000397761 TRIM37O94972 964 aa24.42■■□□□ 1.5
PDLIM2-205ENST00000397761 ZBTB3Q9H5J0 574 aa24.42■■□□□ 1.5
PDLIM2-205ENST00000397761 SCN7AQ01118 1682 aa24.42■■□□□ 1.5
PDLIM2-205ENST00000397761 ERVV-1B6SEH8 477 aa24.41■■□□□ 1.5
PDLIM2-205ENST00000397761 GRM8O00222 908 aa24.41■■□□□ 1.5
PDLIM2-205ENST00000397761 TRIM28Q13263 835 aaKnown RBP24.41■■□□□ 1.5
PDLIM2-205ENST00000397761 COL15A1P39059 1388 aa24.41■■□□□ 1.5
PDLIM2-205ENST00000397761 GIGYF2Q6Y7W6 1299 aaKnown RBP24.4■■□□□ 1.5
PDLIM2-205ENST00000397761 ISCA1Q9BUE6 129 aa24.4■■□□□ 1.5
PDLIM2-205ENST00000397761 C9orf78Q9NZ63 289 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-205ENST00000397761 HDAC5Q9UQL6 1122 aa24.4■■□□□ 1.5
PDLIM2-205ENST00000397761 LRRFIP2Q9Y608 721 aaKnown RBP24.4■■□□□ 1.5
PDLIM2-205ENST00000397761 C4AP0C0L4 1744 aa24.4■■□□□ 1.5
PDLIM2-205ENST00000397761 TCIRG1Q13488 830 aa24.39■■□□□ 1.5
PDLIM2-205ENST00000397761 ZNF330Q9Y3S2 320 aaPredicted RBP24.39■■□□□ 1.5
PDLIM2-205ENST00000397761 KCNQ4P56696 695 aa24.38■■□□□ 1.49
PDLIM2-205ENST00000397761 SLC27A3Q5K4L6 730 aa24.38■■□□□ 1.49
PDLIM2-205ENST00000397761 DZIP3Q86Y13 1208 aaKnown RBP24.38■■□□□ 1.49
PDLIM2-205ENST00000397761 CCDC191Q8NCU4 936 aa24.38■■□□□ 1.49
PDLIM2-205ENST00000397761 ATP5J2-PTCD1G3V325 749 aa24.37■■□□□ 1.49
PDLIM2-205ENST00000397761 ATP8B2P98198 1209 aa24.37■■□□□ 1.49
PDLIM2-205ENST00000397761 MTX1Q13505 466 aa24.37■■□□□ 1.49
PDLIM2-205ENST00000397761 GCC1Q96CN9 775 aa24.37■■□□□ 1.49
PDLIM2-205ENST00000397761 MYH3P11055 1940 aa24.36■■□□□ 1.49
PDLIM2-205ENST00000397761 RGL2O15211 777 aa24.36■■□□□ 1.49
PDLIM2-205ENST00000397761 HSP90AB3PQ58FF7 597 aa24.36■■□□□ 1.49
PDLIM2-205ENST00000397761 NPM2Q86SE8 214 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-205ENST00000397761 CCDC125Q86Z20 511 aa24.36■■□□□ 1.49
PDLIM2-205ENST00000397761 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-205ENST00000397761 DCTPP1Q9H773 170 aa24.36■■□□□ 1.49
PDLIM2-205ENST00000397761 PLSCR1O15162 318 aa24.35■■□□□ 1.49
PDLIM2-205ENST00000397761 HMMRO75330 724 aa24.35■■□□□ 1.49
PDLIM2-205ENST00000397761 RPS6KA4O75676 772 aa24.35■■□□□ 1.49
PDLIM2-205ENST00000397761 CASP7P55210 303 aa24.35■■□□□ 1.49
PDLIM2-205ENST00000397761 HLFQ16534 295 aa24.35■■□□□ 1.49
PDLIM2-205ENST00000397761 LRRC4BQ9NT99 713 aa24.35■■□□□ 1.49
PDLIM2-205ENST00000397761 CWC25Q9NXE8 425 aaPredicted RBP24.35■■□□□ 1.49
PDLIM2-205ENST00000397761 A0A087WZG4 1122 aa24.34■■□□□ 1.49
PDLIM2-205ENST00000397761 H7C1W4 665 aa24.34■■□□□ 1.49
PDLIM2-205ENST00000397761 KAZALD1Q96I82 304 aa24.34■■□□□ 1.49
PDLIM2-205ENST00000397761 TBC1D2BQ9UPU7 963 aa24.34■■□□□ 1.49
PDLIM2-205ENST00000397761 CAMTA2O94983 1202 aa24.33■■□□□ 1.49
PDLIM2-205ENST00000397761 SSH3Q8TE77 659 aa24.33■■□□□ 1.49
PDLIM2-205ENST00000397761 HMGB2P26583 209 aaKnown RBP24.32■■□□□ 1.48
PDLIM2-205ENST00000397761 POLA2Q14181 598 aa24.32■■□□□ 1.48
PDLIM2-205ENST00000397761 PNMA6EA0A0J9YXQ4 647 aa24.32■■□□□ 1.48
PDLIM2-205ENST00000397761 SUCLG2Q96I99 432 aa24.32■■□□□ 1.48
PDLIM2-205ENST00000397761 PDZRN3Q9UPQ7 1066 aa24.32■■□□□ 1.48
PDLIM2-205ENST00000397761 ZNF34Q8IZ26 560 aa24.31■■□□□ 1.48
PDLIM2-205ENST00000397761 LAMB2P55268 1798 aa24.3■■□□□ 1.48
PDLIM2-205ENST00000397761 NUCB1Q02818 461 aa24.3■■□□□ 1.48
PDLIM2-205ENST00000397761 UBE3BQ7Z3V4 1068 aa24.3■■□□□ 1.48
PDLIM2-205ENST00000397761 PPP1R42Q7Z4L9 355 aa24.3■■□□□ 1.48
PDLIM2-205ENST00000397761 PROM2Q8N271 834 aa24.3■■□□□ 1.48
PDLIM2-205ENST00000397761 COL24A1Q17RW2 1714 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms