RNA–Protein interactions for RNA: ENST00000397647.7

PAX8-204, Transcript of paired box 8, humanhuman

TSL 1 (best) BASIC

Gene PAX8, Length 3,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-204ENST00000397647 TRIM5Q9C035 493 aa16.19■□□□□ 0.18
PAX8-204ENST00000397647 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
PAX8-204ENST00000397647 HDGFL1Q5TGJ6 251 aa16.19■□□□□ 0.18
PAX8-204ENST00000397647 CNTROBQ8N137 903 aa16.19■□□□□ 0.18
PAX8-204ENST00000397647 LETM1O95202 739 aaPredicted RBP16.19■□□□□ 0.18
PAX8-204ENST00000397647 TPCN1Q9ULQ1 816 aa16.19■□□□□ 0.18
PAX8-204ENST00000397647 NPHP1O15259 732 aa16.18■□□□□ 0.18
PAX8-204ENST00000397647 ARID5BQ14865 1188 aa16.18■□□□□ 0.18
PAX8-204ENST00000397647 IL17REQ8NFR9 667 aa16.18■□□□□ 0.18
PAX8-204ENST00000397647 TYRO3Q06418 890 aa16.18■□□□□ 0.18
PAX8-204ENST00000397647 FAM227BQ96M60 508 aa16.18■□□□□ 0.18
PAX8-204ENST00000397647 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
PAX8-204ENST00000397647 ATP6V1DQ9Y5K8 247 aa16.17■□□□□ 0.18
PAX8-204ENST00000397647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.17■□□□□ 0.18
PAX8-204ENST00000397647 GOLGA6L4A6NEF3 574 aa16.17■□□□□ 0.18
PAX8-204ENST00000397647 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
PAX8-204ENST00000397647 PI4KAP2A4QPH2 592 aa16.17■□□□□ 0.18
PAX8-204ENST00000397647 PI4KAP1Q8N8J0 262 aa16.17■□□□□ 0.18
PAX8-204ENST00000397647 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
PAX8-204ENST00000397647 DNAJC25Q9H1X3 360 aa16.16■□□□□ 0.18
PAX8-204ENST00000397647 CBX8Q9HC52 389 aa16.16■□□□□ 0.18
PAX8-204ENST00000397647 CYP46A1Q9Y6A2 500 aa16.16■□□□□ 0.18
PAX8-204ENST00000397647 KCNQ3O43525 872 aa16.16■□□□□ 0.18
PAX8-204ENST00000397647 MAP3K11Q16584 847 aa16.16■□□□□ 0.18
PAX8-204ENST00000397647 ERCC4Q92889 916 aaPredicted RBP16.16■□□□□ 0.18
PAX8-204ENST00000397647 SYTL4Q96C24 671 aaPredicted RBP16.16■□□□□ 0.18
PAX8-204ENST00000397647 TNMDQ9H2S6 317 aa16.16■□□□□ 0.18
PAX8-204ENST00000397647 NCBP1Q09161 790 aaKnown RBP16.15■□□□□ 0.18
PAX8-204ENST00000397647 RAB11FIP3O75154 756 aa16.15■□□□□ 0.18
PAX8-204ENST00000397647 TNNT1P13805 278 aa16.15■□□□□ 0.18
PAX8-204ENST00000397647 KIF1BPQ96EK5 621 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 DIP2CQ9Y2E4 1556 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 NR1I2O75469 434 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 LARP1Q6PKG0 1096 aaKnown RBP16.14■□□□□ 0.17
PAX8-204ENST00000397647 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 FAM200AQ8TCP9 573 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 SLC26A8Q96RN1 970 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 CCDC8Q9H0W5 538 aaPredicted RBP16.14■□□□□ 0.17
PAX8-204ENST00000397647 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 SSH2Q76I76 1423 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 GNAT3A8MTJ3 354 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 GOLGA6L6A8MZA4 724 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 CHGBP05060 677 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 CCDC144BQ3MJ40 725 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 CCDC144CPQ8IYA2 1237 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 NDUFB9Q9Y6M9 179 aa16.14■□□□□ 0.17
PAX8-204ENST00000397647 TPD52L1Q16890 204 aaPredicted RBP16.13■□□□□ 0.17
PAX8-204ENST00000397647 ZNF771Q7L3S4 317 aaPredicted RBP16.13■□□□□ 0.17
PAX8-204ENST00000397647 SIL1Q9H173 461 aa16.13■□□□□ 0.17
PAX8-204ENST00000397647 TRMT1Q9NXH9 659 aaKnown RBP16.13■□□□□ 0.17
PAX8-204ENST00000397647 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
PAX8-204ENST00000397647 PREX1Q8TCU6 1659 aa16.13■□□□□ 0.17
PAX8-204ENST00000397647 USP27XA6NNY8 438 aa16.13■□□□□ 0.17
PAX8-204ENST00000397647 KRT85P78386 507 aa16.13■□□□□ 0.17
PAX8-204ENST00000397647 BICD2Q8TD16 824 aa16.13■□□□□ 0.17
PAX8-204ENST00000397647 CACTINQ8WUQ7 758 aaKnown RBP16.13■□□□□ 0.17
PAX8-204ENST00000397647 EDC3Q96F86 508 aaKnown RBP16.13■□□□□ 0.17
PAX8-204ENST00000397647 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
PAX8-204ENST00000397647 UTP14CQ5TAP6 766 aaKnown RBP16.12■□□□□ 0.17
PAX8-204ENST00000397647 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
PAX8-204ENST00000397647 ZBTB22O15209 634 aa16.12■□□□□ 0.17
PAX8-204ENST00000397647 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
PAX8-204ENST00000397647 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
PAX8-204ENST00000397647 ANKRD7Q92527 254 aa16.12■□□□□ 0.17
PAX8-204ENST00000397647 LRRC2Q9BYS8 371 aa16.12■□□□□ 0.17
PAX8-204ENST00000397647 JAK2O60674 1132 aa16.11■□□□□ 0.17
PAX8-204ENST00000397647 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
PAX8-204ENST00000397647 BOLA2Q9H3K6 86 aa16.11■□□□□ 0.17
PAX8-204ENST00000397647 LGR6Q9HBX8 967 aa16.11■□□□□ 0.17
PAX8-204ENST00000397647 AACSQ86V21 672 aa16.11■□□□□ 0.17
PAX8-204ENST00000397647 FTOQ9C0B1 505 aaKnown RBP eCLIP16.11■□□□□ 0.17
PAX8-204ENST00000397647 CLIP2Q9UDT6 1046 aa16.11■□□□□ 0.17
PAX8-204ENST00000397647 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
PAX8-204ENST00000397647 CWF19L2Q2TBE0 894 aaKnown RBP16.11■□□□□ 0.17
PAX8-204ENST00000397647 VPS53Q5VIR6 699 aa16.11■□□□□ 0.17
PAX8-204ENST00000397647 CREB3L3Q68CJ9 461 aa16.11■□□□□ 0.17
PAX8-204ENST00000397647 ZNF165P49910 485 aa16.1■□□□□ 0.17
PAX8-204ENST00000397647 NLRP6P59044 892 aa16.1■□□□□ 0.17
PAX8-204ENST00000397647 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
PAX8-204ENST00000397647 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
PAX8-204ENST00000397647 TAOK2Q9UL54 1235 aa16.1■□□□□ 0.17
PAX8-204ENST00000397647 ROBO2Q9HCK4 1378 aa16.1■□□□□ 0.17
PAX8-204ENST00000397647 NMIQ13287 307 aaPredicted RBP16.1■□□□□ 0.17
PAX8-204ENST00000397647 POLA2Q14181 598 aa16.1■□□□□ 0.17
PAX8-204ENST00000397647 CLASRPQ8N2M8 674 aaKnown RBP16.1■□□□□ 0.17
PAX8-204ENST00000397647 TLR7Q9NYK1 1049 aaKnown RBP16.1■□□□□ 0.17
PAX8-204ENST00000397647 DLC1Q96QB1 1528 aa16.1■□□□□ 0.17
PAX8-204ENST00000397647 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
PAX8-204ENST00000397647 CGNQ9P2M7 1197 aaKnown RBP16.09■□□□□ 0.17
PAX8-204ENST00000397647 A2ML1A8K2U0 1454 aa16.09■□□□□ 0.17
PAX8-204ENST00000397647 CTIFO43310 598 aaKnown RBP16.09■□□□□ 0.17
PAX8-204ENST00000397647 GLRX3O76003 335 aaKnown RBP16.08■□□□□ 0.17
PAX8-204ENST00000397647 ZNF75DP51815 510 aa16.08■□□□□ 0.17
PAX8-204ENST00000397647 PGBD1Q96JS3 809 aa16.08■□□□□ 0.17
PAX8-204ENST00000397647 GTPBP4Q9BZE4 634 aaKnown RBP16.08■□□□□ 0.17
PAX8-204ENST00000397647 CEP170BQ9Y4F5 1589 aaPredicted RBP16.08■□□□□ 0.17
PAX8-204ENST00000397647 USP16Q9Y5T5 823 aa16.08■□□□□ 0.17
PAX8-204ENST00000397647 NECTIN1Q15223 517 aa16.08■□□□□ 0.16
PAX8-204ENST00000397647 IL17RAQ96F46 866 aa16.08■□□□□ 0.16
PAX8-204ENST00000397647 C9orf78Q9NZ63 289 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms