RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
SYNE4-203ENST00000397428 PPP2R1AP30153 589 aa15.97■□□□□ 0.15
SYNE4-203ENST00000397428 C7orf43Q8WVR3 580 aa15.97■□□□□ 0.15
SYNE4-203ENST00000397428 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
SYNE4-203ENST00000397428 KLRG2A4D1S0 409 aaPredicted RBP15.96■□□□□ 0.15
SYNE4-203ENST00000397428 MASTLQ96GX5 879 aa15.96■□□□□ 0.15
SYNE4-203ENST00000397428 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.14
SYNE4-203ENST00000397428 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
SYNE4-203ENST00000397428 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
SYNE4-203ENST00000397428 ST5P78524 1137 aa15.95■□□□□ 0.14
SYNE4-203ENST00000397428 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
SYNE4-203ENST00000397428 COL13A1Q5TAT6 717 aaPredicted RBP15.95■□□□□ 0.14
SYNE4-203ENST00000397428 PRPF40BQ6NWY9 871 aaKnown RBP15.95■□□□□ 0.14
SYNE4-203ENST00000397428 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
SYNE4-203ENST00000397428 MCM10Q7L590 875 aa15.95■□□□□ 0.14
SYNE4-203ENST00000397428 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
SYNE4-203ENST00000397428 COL11A2P13942 1736 aaPredicted RBP15.94■□□□□ 0.14
SYNE4-203ENST00000397428 SLX4Q8IY92 1834 aa15.94■□□□□ 0.14
SYNE4-203ENST00000397428 PIP4K2AP48426 406 aaPredicted RBP15.94■□□□□ 0.14
SYNE4-203ENST00000397428 SOGA3Q5TF21 947 aa15.94■□□□□ 0.14
SYNE4-203ENST00000397428 RTF1Q92541 710 aaKnown RBP15.94■□□□□ 0.14
SYNE4-203ENST00000397428 TAOK3Q9H2K8 898 aa15.94■□□□□ 0.14
SYNE4-203ENST00000397428 TIAM2Q8IVF5 1701 aa15.94■□□□□ 0.14
SYNE4-203ENST00000397428 DCTN1Q14203 1278 aa15.93■□□□□ 0.14
SYNE4-203ENST00000397428 TAF7Q15545 349 aaPredicted RBP15.93■□□□□ 0.14
SYNE4-203ENST00000397428 TPTE2Q6XPS3 522 aa15.93■□□□□ 0.14
SYNE4-203ENST00000397428 NBPF5PQ86XG9 351 aaPredicted RBP15.93■□□□□ 0.14
SYNE4-203ENST00000397428 NPHP1O15259 732 aa15.92■□□□□ 0.14
SYNE4-203ENST00000397428 DDNO94850 711 aaPredicted RBP15.92■□□□□ 0.14
SYNE4-203ENST00000397428 NPR1P16066 1061 aa15.92■□□□□ 0.14
SYNE4-203ENST00000397428 ZNF652Q9Y2D9 606 aa15.92■□□□□ 0.14
SYNE4-203ENST00000397428 BCORQ6W2J9 1755 aa15.92■□□□□ 0.14
SYNE4-203ENST00000397428 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
SYNE4-203ENST00000397428 NIP7Q9Y221 180 aaKnown RBP eCLIP15.9■□□□□ 0.14
SYNE4-203ENST00000397428 HLFQ16534 295 aa15.89■□□□□ 0.13
SYNE4-203ENST00000397428 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
SYNE4-203ENST00000397428 MIS18AQ9NYP9 233 aa15.89■□□□□ 0.13
SYNE4-203ENST00000397428 ARFGEF2Q9Y6D5 1785 aa15.89■□□□□ 0.13
SYNE4-203ENST00000397428 CCDC93Q567U6 631 aa15.88■□□□□ 0.13
SYNE4-203ENST00000397428 RTKN2Q8IZC4 609 aa15.88■□□□□ 0.13
SYNE4-203ENST00000397428 PCNTO95613 3336 aa15.88■□□□□ 0.13
SYNE4-203ENST00000397428 ERVV-1B6SEH8 477 aa15.87■□□□□ 0.13
SYNE4-203ENST00000397428 POTEIP0CG38 1075 aa15.87■□□□□ 0.13
SYNE4-203ENST00000397428 POTEJP0CG39 1038 aa15.87■□□□□ 0.13
SYNE4-203ENST00000397428 ALDH1B1P30837 517 aa15.87■□□□□ 0.13
SYNE4-203ENST00000397428 FKBP4Q02790 459 aaKnown RBP eCLIP15.87■□□□□ 0.13
SYNE4-203ENST00000397428 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
SYNE4-203ENST00000397428 IQCA1LA6NCM1 817 aa15.86■□□□□ 0.13
SYNE4-203ENST00000397428 PNISRQ8TF01 805 aaKnown RBP15.86■□□□□ 0.13
SYNE4-203ENST00000397428 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
SYNE4-203ENST00000397428 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
SYNE4-203ENST00000397428 CACNA1SQ13698 1873 aa15.85■□□□□ 0.13
SYNE4-203ENST00000397428 ITGBL1O95965 494 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-203ENST00000397428 HSPA1AP0DMV8 641 aaKnown RBP15.85■□□□□ 0.13
SYNE4-203ENST00000397428 HSPA1BP0DMV9 641 aaKnown RBP15.85■□□□□ 0.13
SYNE4-203ENST00000397428 OLFM4Q6UX06 510 aa15.85■□□□□ 0.13
SYNE4-203ENST00000397428 LDHDQ86WU2 507 aa15.85■□□□□ 0.13
SYNE4-203ENST00000397428 PASKQ96RG2 1323 aa15.85■□□□□ 0.13
SYNE4-203ENST00000397428 FAM177BA6PVY3 158 aa15.84■□□□□ 0.13
SYNE4-203ENST00000397428 EIF4A1P60842 406 aaKnown RBP15.84■□□□□ 0.13
SYNE4-203ENST00000397428 CRY2Q49AN0 593 aa15.84■□□□□ 0.13
SYNE4-203ENST00000397428 SYNE4Q8N205 404 aa15.84■□□□□ 0.13
SYNE4-203ENST00000397428 ZNF277Q9NRM2 450 aaPredicted RBP15.84■□□□□ 0.13
SYNE4-203ENST00000397428 SCN4AP35499 1836 aa15.83■□□□□ 0.12
SYNE4-203ENST00000397428 FZD9O00144 591 aa15.83■□□□□ 0.12
SYNE4-203ENST00000397428 HOXA10P31260 410 aaPredicted RBP15.83■□□□□ 0.12
SYNE4-203ENST00000397428 TNS4Q8IZW8 715 aa15.83■□□□□ 0.12
SYNE4-203ENST00000397428 NYXQ9GZU5 481 aa15.83■□□□□ 0.12
SYNE4-203ENST00000397428 GTF2E1P29083 439 aaPredicted RBP15.82■□□□□ 0.12
SYNE4-203ENST00000397428 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
SYNE4-203ENST00000397428 PSMD1Q99460 953 aa15.82■□□□□ 0.12
SYNE4-203ENST00000397428 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
SYNE4-203ENST00000397428 MAP3K15Q6ZN16 1313 aa15.82■□□□□ 0.12
SYNE4-203ENST00000397428 NEFMP07197 916 aa15.81■□□□□ 0.12
SYNE4-203ENST00000397428 NFE2L2Q16236 605 aa15.81■□□□□ 0.12
SYNE4-203ENST00000397428 CC2D2BQ6DHV5 1058 aa15.81■□□□□ 0.12
SYNE4-203ENST00000397428 TTLL7Q6ZT98 887 aa15.81■□□□□ 0.12
SYNE4-203ENST00000397428 ZNF34Q8IZ26 560 aa15.81■□□□□ 0.12
SYNE4-203ENST00000397428 NGEFQ8N5V2 710 aa15.81■□□□□ 0.12
SYNE4-203ENST00000397428 SNED1Q8TER0 1413 aa15.81■□□□□ 0.12
SYNE4-203ENST00000397428 ZNF541Q9H0D2 1346 aa15.81■□□□□ 0.12
SYNE4-203ENST00000397428 GRIPAP1Q4V328 841 aa15.8■□□□□ 0.12
SYNE4-203ENST00000397428 NUTM1Q86Y26 1132 aa15.8■□□□□ 0.12
SYNE4-203ENST00000397428 GPC2Q8N158 579 aa15.8■□□□□ 0.12
SYNE4-203ENST00000397428 MKRN1Q9UHC7 482 aaKnown RBP15.8■□□□□ 0.12
SYNE4-203ENST00000397428 HACL1Q9UJ83 578 aa15.8■□□□□ 0.12
SYNE4-203ENST00000397428 DLG5Q8TDM6 1919 aa15.8■□□□□ 0.12
SYNE4-203ENST00000397428 NUP98P52948 1817 aa15.8■□□□□ 0.12
SYNE4-203ENST00000397428 SUSD4Q5VX71 490 aa15.79■□□□□ 0.12
SYNE4-203ENST00000397428 PNMA8AQ86V59 439 aaPredicted RBP15.79■□□□□ 0.12
SYNE4-203ENST00000397428 CRAMP1Q96RY5 1269 aa15.79■□□□□ 0.12
SYNE4-203ENST00000397428 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
SYNE4-203ENST00000397428 PNNQ9H307 717 aaKnown RBP15.79■□□□□ 0.12
SYNE4-203ENST00000397428 KDM3BQ7LBC6 1761 aa15.79■□□□□ 0.12
SYNE4-203ENST00000397428 CNTNAP1P78357 1384 aa15.78■□□□□ 0.12
SYNE4-203ENST00000397428 LAMB4A4D0S4 1761 aa15.78■□□□□ 0.12
SYNE4-203ENST00000397428 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
SYNE4-203ENST00000397428 MYL6BP14649 208 aa15.78■□□□□ 0.12
SYNE4-203ENST00000397428 EPHX2P34913 555 aa15.78■□□□□ 0.12
SYNE4-203ENST00000397428 SLC10A5Q5PT55 438 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms