RNA–Protein interactions for RNA: ENST00000397154.7

NGDN-201, Transcript of neuroguidin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NGDN, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-201ENST00000397154 HSPA1AP0DMV8 641 aaKnown RBP11.53□□□□□ -0.56
NGDN-201ENST00000397154 HSPA1BP0DMV9 641 aaKnown RBP11.53□□□□□ -0.56
NGDN-201ENST00000397154 CHADLQ6NUI6 762 aa11.53□□□□□ -0.56
NGDN-201ENST00000397154 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
NGDN-201ENST00000397154 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
NGDN-201ENST00000397154 DICER1Q9UPY3 1922 aaKnown RBP11.53□□□□□ -0.56
NGDN-201ENST00000397154 SRGNP10124 158 aa11.52□□□□□ -0.56
NGDN-201ENST00000397154 PRKAR2BP31323 418 aa11.52□□□□□ -0.56
NGDN-201ENST00000397154 CLEC4GQ6UXB4 293 aa11.52□□□□□ -0.56
NGDN-201ENST00000397154 CCDC24Q8N4L8 307 aa11.52□□□□□ -0.56
NGDN-201ENST00000397154 CCDC88AQ3V6T2 1871 aa11.52□□□□□ -0.57
NGDN-201ENST00000397154 IQCA1LA6NCM1 817 aa11.52□□□□□ -0.57
NGDN-201ENST00000397154 CCDC93Q567U6 631 aa11.52□□□□□ -0.57
NGDN-201ENST00000397154 NBPF5PQ86XG9 351 aaPredicted RBP11.52□□□□□ -0.57
NGDN-201ENST00000397154 RTF1Q92541 710 aaKnown RBP11.52□□□□□ -0.57
NGDN-201ENST00000397154 RSPH6AQ9H0K4 717 aa11.52□□□□□ -0.57
NGDN-201ENST00000397154 CREBZFQ9NS37 354 aa11.52□□□□□ -0.57
NGDN-201ENST00000397154 SNRPA1P09661 255 aaKnown RBP11.51□□□□□ -0.57
NGDN-201ENST00000397154 NPR1P16066 1061 aa11.51□□□□□ -0.57
NGDN-201ENST00000397154 KCNQ3O43525 872 aa11.5□□□□□ -0.57
NGDN-201ENST00000397154 CNGB1Q14028 1251 aaPredicted RBP11.5□□□□□ -0.57
NGDN-201ENST00000397154 PHACTR3Q96KR7 559 aa11.5□□□□□ -0.57
NGDN-201ENST00000397154 DDNO94850 711 aaPredicted RBP11.5□□□□□ -0.57
NGDN-201ENST00000397154 LDHDQ86WU2 507 aa11.5□□□□□ -0.57
NGDN-201ENST00000397154 L3MBTL3Q96JM7 780 aaPredicted RBP11.5□□□□□ -0.57
NGDN-201ENST00000397154 SLX4Q8IY92 1834 aa11.49□□□□□ -0.57
NGDN-201ENST00000397154 HTATSF1O43719 755 aaKnown RBP11.49□□□□□ -0.57
NGDN-201ENST00000397154 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
NGDN-201ENST00000397154 USP16Q9Y5T5 823 aa11.49□□□□□ -0.57
NGDN-201ENST00000397154 CAPN15O75808 1086 aa11.48□□□□□ -0.57
NGDN-201ENST00000397154 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
NGDN-201ENST00000397154 KLRG2A4D1S0 409 aaPredicted RBP11.48□□□□□ -0.57
NGDN-201ENST00000397154 U2AF1L5P0DN76 240 aaPredicted RBP11.48□□□□□ -0.57
NGDN-201ENST00000397154 U2AF1Q01081 240 aaKnown RBP eCLIP11.48□□□□□ -0.57
NGDN-201ENST00000397154 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
NGDN-201ENST00000397154 C7orf43Q8WVR3 580 aa11.48□□□□□ -0.57
NGDN-201ENST00000397154 TAF1DQ9H5J8 278 aaPredicted RBP11.47□□□□□ -0.57
NGDN-201ENST00000397154 NIP7Q9Y221 180 aaKnown RBP eCLIP11.47□□□□□ -0.57
NGDN-201ENST00000397154 CACNA1SQ13698 1873 aa11.47□□□□□ -0.57
NGDN-201ENST00000397154 SCN4AP35499 1836 aa11.47□□□□□ -0.57
NGDN-201ENST00000397154 CNTNAP1P78357 1384 aa11.47□□□□□ -0.57
NGDN-201ENST00000397154 PIP4K2AP48426 406 aaPredicted RBP11.47□□□□□ -0.57
NGDN-201ENST00000397154 MCM10Q7L590 875 aa11.47□□□□□ -0.57
NGDN-201ENST00000397154 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
NGDN-201ENST00000397154 ALDH1B1P30837 517 aa11.46□□□□□ -0.57
NGDN-201ENST00000397154 PASKQ96RG2 1323 aa11.46□□□□□ -0.58
NGDN-201ENST00000397154 LAMB4A4D0S4 1761 aa11.46□□□□□ -0.58
NGDN-201ENST00000397154 PRAMEF22A3QJZ6 481 aa11.45□□□□□ -0.58
NGDN-201ENST00000397154 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
NGDN-201ENST00000397154 HACL1Q9UJ83 578 aa11.45□□□□□ -0.58
NGDN-201ENST00000397154 NBPF26B4DH59 902 aa11.45□□□□□ -0.58
NGDN-201ENST00000397154 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
NGDN-201ENST00000397154 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
NGDN-201ENST00000397154 GTF2E1P29083 439 aaPredicted RBP11.45□□□□□ -0.58
NGDN-201ENST00000397154 PPP2R1AP30153 589 aa11.45□□□□□ -0.58
NGDN-201ENST00000397154 TAF7Q15545 349 aaPredicted RBP11.45□□□□□ -0.58
NGDN-201ENST00000397154 NBPF10Q6P3W6 841 aaKnown RBP11.45□□□□□ -0.58
NGDN-201ENST00000397154 NBPF15Q8N660 670 aa11.45□□□□□ -0.58
NGDN-201ENST00000397154 PNISRQ8TF01 805 aaKnown RBP11.45□□□□□ -0.58
NGDN-201ENST00000397154 ZNF541Q9H0D2 1346 aa11.45□□□□□ -0.58
NGDN-201ENST00000397154 NEFMP07197 916 aa11.44□□□□□ -0.58
NGDN-201ENST00000397154 CC2D2BQ6DHV5 1058 aa11.44□□□□□ -0.58
NGDN-201ENST00000397154 AIDAQ96BJ3 306 aa11.44□□□□□ -0.58
NGDN-201ENST00000397154 ZNF277Q9NRM2 450 aaPredicted RBP11.44□□□□□ -0.58
NGDN-201ENST00000397154 RIC1Q4ADV7 1423 aa11.44□□□□□ -0.58
NGDN-201ENST00000397154 TMEM88BA6NKF7 163 aa11.44□□□□□ -0.58
NGDN-201ENST00000397154 IARSP41252 1262 aaKnown RBP11.44□□□□□ -0.58
NGDN-201ENST00000397154 GRIPAP1Q4V328 841 aa11.44□□□□□ -0.58
NGDN-201ENST00000397154 EAPPQ56P03 285 aaPredicted RBP11.44□□□□□ -0.58
NGDN-201ENST00000397154 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
NGDN-201ENST00000397154 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
NGDN-201ENST00000397154 ERVV-1B6SEH8 477 aa11.43□□□□□ -0.58
NGDN-201ENST00000397154 EPHX2P34913 555 aa11.43□□□□□ -0.58
NGDN-201ENST00000397154 PSMD1Q99460 953 aa11.43□□□□□ -0.58
NGDN-201ENST00000397154 FAM177BA6PVY3 158 aa11.43□□□□□ -0.58
NGDN-201ENST00000397154 DCTN1Q14203 1278 aa11.43□□□□□ -0.58
NGDN-201ENST00000397154 KIF6Q6ZMV9 814 aa11.43□□□□□ -0.58
NGDN-201ENST00000397154 SYNE4Q8N205 404 aa11.43□□□□□ -0.58
NGDN-201ENST00000397154 PRDM10Q9NQV6 1147 aa11.43□□□□□ -0.58
NGDN-201ENST00000397154 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
NGDN-201ENST00000397154 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
NGDN-201ENST00000397154 FZD9O00144 591 aa11.42□□□□□ -0.58
NGDN-201ENST00000397154 CTCFP49711 727 aaPredicted RBP11.42□□□□□ -0.58
NGDN-201ENST00000397154 CRY2Q49AN0 593 aa11.42□□□□□ -0.58
NGDN-201ENST00000397154 GPC2Q8N158 579 aa11.42□□□□□ -0.58
NGDN-201ENST00000397154 JDP2Q8WYK2 163 aa11.42□□□□□ -0.58
NGDN-201ENST00000397154 ITGBL1O95965 494 aaPredicted RBP11.41□□□□□ -0.58
NGDN-201ENST00000397154 HLFQ16534 295 aa11.41□□□□□ -0.58
NGDN-201ENST00000397154 RPGRQ92834 1020 aaKnown RBP11.41□□□□□ -0.58
NGDN-201ENST00000397154 MAP3K15Q6ZN16 1313 aa11.41□□□□□ -0.58
NGDN-201ENST00000397154 FOXN1O15353 648 aa11.41□□□□□ -0.58
NGDN-201ENST00000397154 EIF6P56537 245 aaKnown RBP11.41□□□□□ -0.58
NGDN-201ENST00000397154 ABCC12Q96J65 1359 aa11.41□□□□□ -0.58
NGDN-201ENST00000397154 SNED1Q8TER0 1413 aa11.41□□□□□ -0.58
NGDN-201ENST00000397154 KDM3BQ7LBC6 1761 aa11.41□□□□□ -0.58
NGDN-201ENST00000397154 LMOD1P29536 600 aaPredicted RBP11.4□□□□□ -0.58
NGDN-201ENST00000397154 VEGFBP49765 207 aa11.4□□□□□ -0.58
NGDN-201ENST00000397154 OLFM4Q6UX06 510 aa11.4□□□□□ -0.58
NGDN-201ENST00000397154 HOXA10P31260 410 aaPredicted RBP11.4□□□□□ -0.58
NGDN-201ENST00000397154 ERBB4Q15303 1308 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms