RNA–Protein interactions for RNA: ENST00000397085.3

RAPGEF4-202, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-202ENST00000397085 LZTS3O60299 673 aaPredicted RBP9.24□□□□□ -0.93
RAPGEF4-202ENST00000397085 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
RAPGEF4-202ENST00000397085 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
RAPGEF4-202ENST00000397085 NOS2P35228 1153 aa9.23□□□□□ -0.93
RAPGEF4-202ENST00000397085 GTF2IP78347 998 aa9.23□□□□□ -0.93
RAPGEF4-202ENST00000397085 TEAD4Q15561 434 aa9.23□□□□□ -0.93
RAPGEF4-202ENST00000397085 FAM229AH3BQW9 127 aa9.22□□□□□ -0.93
RAPGEF4-202ENST00000397085 SKIP12755 728 aa9.22□□□□□ -0.93
RAPGEF4-202ENST00000397085 NKAPLQ5M9Q1 402 aa9.22□□□□□ -0.93
RAPGEF4-202ENST00000397085 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.22□□□□□ -0.93
RAPGEF4-202ENST00000397085 PRDM6Q9NQX0 595 aa9.22□□□□□ -0.93
RAPGEF4-202ENST00000397085 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
RAPGEF4-202ENST00000397085 DYRK3O43781 588 aa9.21□□□□□ -0.94
RAPGEF4-202ENST00000397085 NBPF11Q86T75 865 aa9.21□□□□□ -0.94
RAPGEF4-202ENST00000397085 RHPN1Q8TCX5 695 aa9.21□□□□□ -0.94
RAPGEF4-202ENST00000397085 TNFRSF25Q93038 417 aa9.21□□□□□ -0.94
RAPGEF4-202ENST00000397085 ZFP64Q9NPA5 681 aa9.21□□□□□ -0.94
RAPGEF4-202ENST00000397085 ZNF358Q9NW07 568 aa9.21□□□□□ -0.94
RAPGEF4-202ENST00000397085 SERTM1A2A2V5 107 aa9.2□□□□□ -0.94
RAPGEF4-202ENST00000397085 EML1O00423 815 aa9.2□□□□□ -0.94
RAPGEF4-202ENST00000397085 SPEM2Q0P670 501 aa9.2□□□□□ -0.94
RAPGEF4-202ENST00000397085 SFSWAPQ12872 951 aaKnown RBP9.2□□□□□ -0.94
RAPGEF4-202ENST00000397085 SLC9A9Q8IVB4 645 aa9.2□□□□□ -0.94
RAPGEF4-202ENST00000397085 ZDHHC1Q8WTX9 485 aa9.2□□□□□ -0.94
RAPGEF4-202ENST00000397085 C9orf172C9J069 976 aa9.19□□□□□ -0.94
RAPGEF4-202ENST00000397085 ADH7P40394 386 aa9.19□□□□□ -0.94
RAPGEF4-202ENST00000397085 TRAPPC3LQ5T215 181 aa9.19□□□□□ -0.94
RAPGEF4-202ENST00000397085 WWC1Q8IX03 1113 aa9.19□□□□□ -0.94
RAPGEF4-202ENST00000397085 MICALL1Q8N3F8 863 aa9.19□□□□□ -0.94
RAPGEF4-202ENST00000397085 SLC30A3Q99726 388 aa9.19□□□□□ -0.94
RAPGEF4-202ENST00000397085 MDFIQ99750 246 aa9.19□□□□□ -0.94
RAPGEF4-202ENST00000397085 ANKIB1Q9P2G1 1089 aa9.19□□□□□ -0.94
RAPGEF4-202ENST00000397085 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
RAPGEF4-202ENST00000397085 ALBP02768 609 aa9.18□□□□□ -0.94
RAPGEF4-202ENST00000397085 CEP63Q96MT8 703 aa9.18□□□□□ -0.94
RAPGEF4-202ENST00000397085 GRIK4Q16099 956 aa9.17□□□□□ -0.94
RAPGEF4-202ENST00000397085 PRSS36Q5K4E3 855 aa9.17□□□□□ -0.94
RAPGEF4-202ENST00000397085 TBCELQ5QJ74 424 aa9.17□□□□□ -0.94
RAPGEF4-202ENST00000397085 ARTNQ5T4W7 220 aa9.17□□□□□ -0.94
RAPGEF4-202ENST00000397085 C8orf86Q6ZUL3 223 aa9.17□□□□□ -0.94
RAPGEF4-202ENST00000397085 BRD7Q9NPI1 651 aa9.17□□□□□ -0.94
RAPGEF4-202ENST00000397085 LILRB5O75023 590 aa9.16□□□□□ -0.94
RAPGEF4-202ENST00000397085 NCOA4Q13772 614 aa9.16□□□□□ -0.94
RAPGEF4-202ENST00000397085 TRIM50Q86XT4 487 aa9.16□□□□□ -0.94
RAPGEF4-202ENST00000397085 TNS4Q8IZW8 715 aa9.16□□□□□ -0.94
RAPGEF4-202ENST00000397085 NFATC2IPQ8NCF5 419 aa9.16□□□□□ -0.94
RAPGEF4-202ENST00000397085 STARD13Q9Y3M8 1113 aa9.16□□□□□ -0.94
RAPGEF4-202ENST00000397085 RAC1P63000 192 aa9.15□□□□□ -0.94
RAPGEF4-202ENST00000397085 RAB44Q7Z6P3 723 aaPredicted RBP9.15□□□□□ -0.94
RAPGEF4-202ENST00000397085 KCNH4Q9UQ05 1017 aa9.15□□□□□ -0.94
RAPGEF4-202ENST00000397085 NID1P14543 1247 aa9.14□□□□□ -0.95
RAPGEF4-202ENST00000397085 TBC1D8BQ0IIM8 1120 aa9.14□□□□□ -0.95
RAPGEF4-202ENST00000397085 SFI1A8K8P3 1242 aa9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 EPHA4P54764 986 aa9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 PSMA6P60900 246 aaKnown RBP9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 NRG1Q02297 640 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 COL9A3Q14050 684 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 FOXD4L6Q3SYB3 417 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 C1orf53Q5VUE5 145 aa9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 FOXD4L3Q6VB84 417 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 KRTAP9-2Q9BYQ4 174 aa9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 UBE2OQ9C0C9 1292 aaKnown RBP9.13□□□□□ -0.95
RAPGEF4-202ENST00000397085 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.12□□□□□ -0.95
RAPGEF4-202ENST00000397085 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
RAPGEF4-202ENST00000397085 H2AFB2P0C5Z0 115 aa9.12□□□□□ -0.95
RAPGEF4-202ENST00000397085 ELNP15502 786 aa9.12□□□□□ -0.95
RAPGEF4-202ENST00000397085 ATP1A2P50993 1020 aa9.12□□□□□ -0.95
RAPGEF4-202ENST00000397085 BHMTQ93088 406 aa9.12□□□□□ -0.95
RAPGEF4-202ENST00000397085 HCN4Q9Y3Q4 1203 aa9.12□□□□□ -0.95
RAPGEF4-202ENST00000397085 USP17L5A8MUK1 530 aa9.11□□□□□ -0.95
RAPGEF4-202ENST00000397085 TXNRD3Q86VQ6 643 aa9.11□□□□□ -0.95
RAPGEF4-202ENST00000397085 DEPDC4Q8N2C3 294 aa9.11□□□□□ -0.95
RAPGEF4-202ENST00000397085 HSH2DQ96JZ2 352 aa9.11□□□□□ -0.95
RAPGEF4-202ENST00000397085 IGFLR1Q9H665 355 aa9.11□□□□□ -0.95
RAPGEF4-202ENST00000397085 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
RAPGEF4-202ENST00000397085 KCNQ4P56696 695 aa9.1□□□□□ -0.95
RAPGEF4-202ENST00000397085 ADGRE1Q14246 886 aa9.1□□□□□ -0.95
RAPGEF4-202ENST00000397085 SH3PXD2AQ5TCZ1 1133 aa9.1□□□□□ -0.95
RAPGEF4-202ENST00000397085 C20orf204Q6ZNR8 217 aa9.1□□□□□ -0.95
RAPGEF4-202ENST00000397085 TPCN2Q8NHX9 752 aa9.1□□□□□ -0.95
RAPGEF4-202ENST00000397085 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
RAPGEF4-202ENST00000397085 PHACTR1Q9C0D0 580 aa9.1□□□□□ -0.95
RAPGEF4-202ENST00000397085 JPH1Q9HDC5 661 aaPredicted RBP9.1□□□□□ -0.95
RAPGEF4-202ENST00000397085 A0A0A0MRY4 1105 aa9.09□□□□□ -0.95
RAPGEF4-202ENST00000397085 KRTAP9-6A0A140TA67 174 aa9.09□□□□□ -0.95
RAPGEF4-202ENST00000397085 MCM6Q14566 821 aa9.09□□□□□ -0.95
RAPGEF4-202ENST00000397085 MBTPS1Q14703 1052 aa9.09□□□□□ -0.95
RAPGEF4-202ENST00000397085 HIF1AQ16665 826 aa9.09□□□□□ -0.95
RAPGEF4-202ENST00000397085 ALG2Q9H553 416 aa9.09□□□□□ -0.95
RAPGEF4-202ENST00000397085 USP21Q9UK80 565 aa9.09□□□□□ -0.95
RAPGEF4-202ENST00000397085 TYRO3Q06418 890 aa9.08□□□□□ -0.96
RAPGEF4-202ENST00000397085 LRP8Q14114 963 aa9.08□□□□□ -0.96
RAPGEF4-202ENST00000397085 CCDC102BQ68D86 513 aa9.08□□□□□ -0.96
RAPGEF4-202ENST00000397085 TP53INP1Q96A56 240 aa9.08□□□□□ -0.96
RAPGEF4-202ENST00000397085 LENG1Q96BZ8 264 aaPredicted RBP9.08□□□□□ -0.96
RAPGEF4-202ENST00000397085 SUSD3Q96L08 255 aa9.08□□□□□ -0.96
RAPGEF4-202ENST00000397085 PNMA5Q96PV4 448 aa9.08□□□□□ -0.96
RAPGEF4-202ENST00000397085 TSPAN10Q9H1Z9 355 aaPredicted RBP9.08□□□□□ -0.96
RAPGEF4-202ENST00000397085 HIRAP54198 1017 aaPredicted RBP9.07□□□□□ -0.96
RAPGEF4-202ENST00000397085 NUDT8Q8WV74 236 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms