RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ANKRD36CQ5JPF3 1778 aa18.74■□□□□ 0.59
TM9SF1-202ENST00000396854 PDE4AP27815 886 aa18.73■□□□□ 0.59
TM9SF1-202ENST00000396854 AIMP1Q12904 312 aaKnown RBP18.73■□□□□ 0.59
TM9SF1-202ENST00000396854 KSR2Q6VAB6 950 aa18.73■□□□□ 0.59
TM9SF1-202ENST00000396854 CCDC125Q86Z20 511 aa18.73■□□□□ 0.59
TM9SF1-202ENST00000396854 BACH2Q9BYV9 841 aa18.73■□□□□ 0.59
TM9SF1-202ENST00000396854 C4AP0C0L4 1744 aa18.73■□□□□ 0.59
TM9SF1-202ENST00000396854 NUP98P52948 1817 aa18.73■□□□□ 0.59
TM9SF1-202ENST00000396854 SF3B2Q13435 895 aaKnown RBP18.73■□□□□ 0.59
TM9SF1-202ENST00000396854 SCN7AQ01118 1682 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 PI4KAP2A4QPH2 592 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 F6X3S4 739 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 PI4KAP1Q8N8J0 262 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 TUBGCP6Q96RT7 1819 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 ATP10DQ9P241 1426 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 COL15A1P39059 1388 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 TTLL7Q6ZT98 887 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 ANKRD13DQ6ZTN6 518 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 TMEM57Q8N5G2 664 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 DNAAF4Q8WXU2 420 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 CAMKK2Q96RR4 588 aa18.72■□□□□ 0.59
TM9SF1-202ENST00000396854 BAG6P46379 1132 aa18.71■□□□□ 0.59
TM9SF1-202ENST00000396854 INTS3Q68E01 1043 aaKnown RBP18.71■□□□□ 0.59
TM9SF1-202ENST00000396854 RPS6KA4O75676 772 aa18.7■□□□□ 0.58
TM9SF1-202ENST00000396854 MVPQ14764 893 aaKnown RBP18.7■□□□□ 0.58
TM9SF1-202ENST00000396854 MAP3K2Q9Y2U5 619 aa18.7■□□□□ 0.58
TM9SF1-202ENST00000396854 QSER1Q2KHR3 1735 aa18.7■□□□□ 0.58
TM9SF1-202ENST00000396854 RIC3Q7Z5B4 369 aa18.7■□□□□ 0.58
TM9SF1-202ENST00000396854 COG6Q9Y2V7 657 aa18.7■□□□□ 0.58
TM9SF1-202ENST00000396854 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
TM9SF1-202ENST00000396854 KDM2BQ8NHM5 1336 aa18.7■□□□□ 0.58
TM9SF1-202ENST00000396854 CCT4P50991 539 aaKnown RBP18.69■□□□□ 0.58
TM9SF1-202ENST00000396854 EN1Q05925 392 aaPredicted RBP18.69■□□□□ 0.58
TM9SF1-202ENST00000396854 KIF6Q6ZMV9 814 aa18.69■□□□□ 0.58
TM9SF1-202ENST00000396854 GNPATO15228 680 aa18.69■□□□□ 0.58
TM9SF1-202ENST00000396854 NPM2Q86SE8 214 aaKnown RBP18.69■□□□□ 0.58
TM9SF1-202ENST00000396854 AK7Q96M32 723 aa18.69■□□□□ 0.58
TM9SF1-202ENST00000396854 MAP3K15Q6ZN16 1313 aa18.68■□□□□ 0.58
TM9SF1-202ENST00000396854 A0A087WZG4 1122 aa18.68■□□□□ 0.58
TM9SF1-202ENST00000396854 EZH2Q15910 746 aaKnown RBP18.68■□□□□ 0.58
TM9SF1-202ENST00000396854 SLC4A10Q6U841 1118 aa18.68■□□□□ 0.58
TM9SF1-202ENST00000396854 RTCBQ9Y3I0 505 aaKnown RBP18.68■□□□□ 0.58
TM9SF1-202ENST00000396854 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
TM9SF1-202ENST00000396854 BEND3Q5T5X7 828 aa18.67■□□□□ 0.58
TM9SF1-202ENST00000396854 DZIP3Q86Y13 1208 aaKnown RBP18.67■□□□□ 0.58
TM9SF1-202ENST00000396854 ITPRIPQ8IWB1 547 aa18.67■□□□□ 0.58
TM9SF1-202ENST00000396854 METTL22Q9BUU2 404 aaPredicted RBP18.67■□□□□ 0.58
TM9SF1-202ENST00000396854 DDX19BQ9UMR2 479 aa18.67■□□□□ 0.58
TM9SF1-202ENST00000396854 ERVV-1B6SEH8 477 aa18.67■□□□□ 0.58
TM9SF1-202ENST00000396854 ZBTB3Q9H5J0 574 aa18.66■□□□□ 0.58
TM9SF1-202ENST00000396854 ADRA2BP18089 450 aa18.65■□□□□ 0.58
TM9SF1-202ENST00000396854 DEFB132Q7Z7B7 95 aa18.65■□□□□ 0.58
TM9SF1-202ENST00000396854 AKT1S1Q96B36 256 aa18.65■□□□□ 0.58
TM9SF1-202ENST00000396854 RGL2O15211 777 aa18.65■□□□□ 0.58
TM9SF1-202ENST00000396854 CENPQQ7L2Z9 268 aaPredicted RBP18.65■□□□□ 0.58
TM9SF1-202ENST00000396854 AMIGO3Q86WK7 504 aa18.65■□□□□ 0.58
TM9SF1-202ENST00000396854 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
TM9SF1-202ENST00000396854 TBC1D2BQ9UPU7 963 aa18.65■□□□□ 0.58
TM9SF1-202ENST00000396854 SSFA2P28290 1259 aa18.64■□□□□ 0.57
TM9SF1-202ENST00000396854 NEXNQ0ZGT2 675 aa18.64■□□□□ 0.57
TM9SF1-202ENST00000396854 GIGYF2Q6Y7W6 1299 aaKnown RBP18.64■□□□□ 0.57
TM9SF1-202ENST00000396854 LINS1Q8NG48 757 aa18.64■□□□□ 0.57
TM9SF1-202ENST00000396854 ALDH1L1O75891 902 aa18.64■□□□□ 0.57
TM9SF1-202ENST00000396854 CAMTA2O94983 1202 aa18.64■□□□□ 0.57
TM9SF1-202ENST00000396854 AAMPQ13685 434 aa18.64■□□□□ 0.57
TM9SF1-202ENST00000396854 ZNF827Q17R98 1081 aa18.64■□□□□ 0.57
TM9SF1-202ENST00000396854 BCL11AQ9H165 835 aa18.64■□□□□ 0.57
TM9SF1-202ENST00000396854 IGKV5-2P06315 115 aa18.63■□□□□ 0.57
TM9SF1-202ENST00000396854 MYD88Q99836 296 aa18.63■□□□□ 0.57
TM9SF1-202ENST00000396854 CHMP4BQ9H444 224 aaKnown RBP18.63■□□□□ 0.57
TM9SF1-202ENST00000396854 ZBTB7BO15156 539 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-202ENST00000396854 HLFQ16534 295 aa18.62■□□□□ 0.57
TM9SF1-202ENST00000396854 HSP90AB3PQ58FF7 597 aa18.62■□□□□ 0.57
TM9SF1-202ENST00000396854 UPF1Q92900 1129 aaKnown RBP eCLIP18.62■□□□□ 0.576e-6■■■■□ 21.9
TM9SF1-202ENST00000396854 ARXQ96QS3 562 aa18.62■□□□□ 0.57
TM9SF1-202ENST00000396854 NARFQ9UHQ1 456 aa18.62■□□□□ 0.57
TM9SF1-202ENST00000396854 TCIRG1Q13488 830 aa18.62■□□□□ 0.57
TM9SF1-202ENST00000396854 TRAPPC3LQ5T215 181 aa18.62■□□□□ 0.57
TM9SF1-202ENST00000396854 ARHGEF1Q92888 912 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-202ENST00000396854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.61■□□□□ 0.57
TM9SF1-202ENST00000396854 NEURL1BA8MQ27 555 aa18.61■□□□□ 0.57
TM9SF1-202ENST00000396854 ISCA1Q9BUE6 129 aa18.61■□□□□ 0.57
TM9SF1-202ENST00000396854 CWF19L2Q2TBE0 894 aaKnown RBP18.61■□□□□ 0.57
TM9SF1-202ENST00000396854 CLEC4GQ6UXB4 293 aa18.61■□□□□ 0.57
TM9SF1-202ENST00000396854 SMIM5Q71RC9 77 aa18.61■□□□□ 0.57
TM9SF1-202ENST00000396854 COL24A1Q17RW2 1714 aa18.6■□□□□ 0.57
TM9SF1-202ENST00000396854 USP42Q9H9J4 1324 aaKnown RBP18.6■□□□□ 0.57
TM9SF1-202ENST00000396854 TRIM28Q13263 835 aaKnown RBP18.6■□□□□ 0.57
TM9SF1-202ENST00000396854 NBR1Q14596 966 aa18.6■□□□□ 0.57
TM9SF1-202ENST00000396854 ZBTB40Q9NUA8 1239 aa18.6■□□□□ 0.57
TM9SF1-202ENST00000396854 PHF14O94880 888 aa18.59■□□□□ 0.57
TM9SF1-202ENST00000396854 ZNF652Q9Y2D9 606 aa18.59■□□□□ 0.57
TM9SF1-202ENST00000396854 RFC4P35249 363 aa18.59■□□□□ 0.57
TM9SF1-202ENST00000396854 MEIS3Q99687 375 aa18.59■□□□□ 0.57
TM9SF1-202ENST00000396854 USP44Q9H0E7 712 aa18.59■□□□□ 0.57
TM9SF1-202ENST00000396854 ANO8Q9HCE9 1232 aaPredicted RBP18.59■□□□□ 0.57
TM9SF1-202ENST00000396854 TFCP2L1Q9NZI6 479 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms