RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 ZKSCAN5Q9Y2L8 839 aa22.12■■□□□ 1.13
IFFO1-204ENST00000396840 STX6O43752 255 aa22.11■■□□□ 1.13
IFFO1-204ENST00000396840 GLRX3O76003 335 aaKnown RBP22.11■■□□□ 1.13
IFFO1-204ENST00000396840 ZSCAN22P10073 491 aaPredicted RBP22.11■■□□□ 1.13
IFFO1-204ENST00000396840 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.11■■□□□ 1.13
IFFO1-204ENST00000396840 AACSQ86V21 672 aa22.11■■□□□ 1.13
IFFO1-204ENST00000396840 DBF4Q9UBU7 674 aaPredicted RBP22.11■■□□□ 1.13
IFFO1-204ENST00000396840 HS1BP3Q53T59 392 aa22.1■■□□□ 1.13
IFFO1-204ENST00000396840 HSP90AB4PQ58FF6 505 aa22.1■■□□□ 1.13
IFFO1-204ENST00000396840 IL17RAQ96F46 866 aa22.1■■□□□ 1.13
IFFO1-204ENST00000396840 SIL1Q9H173 461 aa22.1■■□□□ 1.13
IFFO1-204ENST00000396840 C1orf141Q5JVX7 400 aa22.1■■□□□ 1.13
IFFO1-204ENST00000396840 RGPD2P0DJD1 1756 aa22.09■■□□□ 1.13
IFFO1-204ENST00000396840 RBM10P98175 930 aaKnown RBP22.09■■□□□ 1.13
IFFO1-204ENST00000396840 AKAP4Q5JQC9 854 aa22.09■■□□□ 1.13
IFFO1-204ENST00000396840 CCDC8Q9H0W5 538 aaPredicted RBP22.09■■□□□ 1.13
IFFO1-204ENST00000396840 TPM2P07951 284 aa22.09■■□□□ 1.13
IFFO1-204ENST00000396840 COL9A3Q14050 684 aaPredicted RBP22.09■■□□□ 1.13
IFFO1-204ENST00000396840 ECHDC1Q9NTX5 307 aa22.09■■□□□ 1.13
IFFO1-204ENST00000396840 N4BP2Q86UW6 1770 aaPredicted RBP22.08■■□□□ 1.13
IFFO1-204ENST00000396840 KCNJ4P48050 445 aa22.08■■□□□ 1.13
IFFO1-204ENST00000396840 PLEKHO1Q53GL0 409 aaPredicted RBP22.08■■□□□ 1.13
IFFO1-204ENST00000396840 NECAB1Q8N987 351 aa22.08■■□□□ 1.13
IFFO1-204ENST00000396840 GJB2P29033 226 aa22.08■■□□□ 1.12
IFFO1-204ENST00000396840 FAM227BQ96M60 508 aa22.08■■□□□ 1.12
IFFO1-204ENST00000396840 PDRG1Q9NUG6 133 aa22.08■■□□□ 1.12
IFFO1-204ENST00000396840 HYPKQ9NX55 129 aa22.08■■□□□ 1.12
IFFO1-204ENST00000396840 CCDC39Q9UFE4 941 aa22.08■■□□□ 1.12
IFFO1-204ENST00000396840 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.08■■□□□ 1.12
IFFO1-204ENST00000396840 RNMTO43148 476 aaKnown RBP22.07■■□□□ 1.12
IFFO1-204ENST00000396840 KLHDC4Q8TBB5 520 aa22.07■■□□□ 1.12
IFFO1-204ENST00000396840 TCEANC2Q96MN5 208 aa22.07■■□□□ 1.12
IFFO1-204ENST00000396840 ZNF830Q96NB3 372 aaPredicted RBP22.07■■□□□ 1.12
IFFO1-204ENST00000396840 USP25Q9UHP3 1055 aa22.07■■□□□ 1.12
IFFO1-204ENST00000396840 VPS37CA5D8V6 355 aaPredicted RBP22.07■■□□□ 1.12
IFFO1-204ENST00000396840 RRP9O43818 475 aaKnown RBP22.07■■□□□ 1.12
IFFO1-204ENST00000396840 PLCB2Q00722 1185 aa22.07■■□□□ 1.12
IFFO1-204ENST00000396840 TTC41PQ6P2S7 1318 aa22.07■■□□□ 1.12
IFFO1-204ENST00000396840 GIGYF1O75420 1035 aaPredicted RBP22.06■■□□□ 1.12
IFFO1-204ENST00000396840 HCLS1P14317 486 aaPredicted RBP22.06■■□□□ 1.12
IFFO1-204ENST00000396840 PXDNQ92626 1479 aa22.06■■□□□ 1.12
IFFO1-204ENST00000396840 ZNF500O60304 480 aaPredicted RBP22.06■■□□□ 1.12
IFFO1-204ENST00000396840 PHF14O94880 888 aa22.06■■□□□ 1.12
IFFO1-204ENST00000396840 F13A1P00488 732 aa22.06■■□□□ 1.12
IFFO1-204ENST00000396840 HOXB7P09629 217 aa22.06■■□□□ 1.12
IFFO1-204ENST00000396840 DNM1Q05193 864 aaKnown RBP22.06■■□□□ 1.12
IFFO1-204ENST00000396840 RUFY2Q8WXA3 655 aa22.06■■□□□ 1.12
IFFO1-204ENST00000396840 TLR7Q9NYK1 1049 aaKnown RBP22.06■■□□□ 1.12
IFFO1-204ENST00000396840 SUCLG2Q96I99 432 aa22.05■■□□□ 1.12
IFFO1-204ENST00000396840 KSR2Q6VAB6 950 aa22.05■■□□□ 1.12
IFFO1-204ENST00000396840 CHMP3Q9Y3E7 222 aa22.05■■□□□ 1.12
IFFO1-204ENST00000396840 EPB41L2O43491 1005 aaKnown RBP22.04■■□□□ 1.12
IFFO1-204ENST00000396840 ORAI2Q96SN7 254 aa22.04■■□□□ 1.12
IFFO1-204ENST00000396840 BICC1Q9H694 974 aaKnown RBP22.04■■□□□ 1.12
IFFO1-204ENST00000396840 JARID2Q92833 1246 aaPredicted RBP22.04■■□□□ 1.12
IFFO1-204ENST00000396840 GPATCH3Q96I76 525 aa22.04■■□□□ 1.12
IFFO1-204ENST00000396840 BOLA2Q9H3K6 86 aa22.04■■□□□ 1.12
IFFO1-204ENST00000396840 MYL6BP14649 208 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 SLC39A6Q13433 755 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 CCDC183Q5T5S1 534 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 EAF2Q96CJ1 260 aaPredicted RBP22.03■■□□□ 1.12
IFFO1-204ENST00000396840 CYP46A1Q9Y6A2 500 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 GCP02774 474 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 GIMAP6Q6P9H5 292 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 SASH1O94885 1247 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 ME3Q16798 604 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 ANKRD24Q8TF21 1146 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 PKNOX2Q96KN3 472 aa22.03■■□□□ 1.12
IFFO1-204ENST00000396840 RBM8AQ9Y5S9 174 aaKnown RBP22.03■■□□□ 1.12
IFFO1-204ENST00000396840 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.03■■□□□ 1.12
IFFO1-204ENST00000396840 NMIQ13287 307 aaPredicted RBP22.02■■□□□ 1.12
IFFO1-204ENST00000396840 FERMT3Q86UX7 667 aa22.02■■□□□ 1.12
IFFO1-204ENST00000396840 KCNH5Q8NCM2 988 aa22.02■■□□□ 1.12
IFFO1-204ENST00000396840 PIP4K2AP48426 406 aaPredicted RBP22.02■■□□□ 1.11
IFFO1-204ENST00000396840 MTX1Q13505 466 aa22.02■■□□□ 1.11
IFFO1-204ENST00000396840 KAZALD1Q96I82 304 aa22.02■■□□□ 1.11
IFFO1-204ENST00000396840 AXIN2Q9Y2T1 843 aa22.02■■□□□ 1.11
IFFO1-204ENST00000396840 USP42Q9H9J4 1324 aaKnown RBP22.02■■□□□ 1.11
IFFO1-204ENST00000396840 KDM3BQ7LBC6 1761 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 GRM8O00222 908 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 UBE2HP62256 183 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 ST3GAL1Q11201 340 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 G3BP1Q13283 466 aaKnown RBP eCLIP22.01■■□□□ 1.11
IFFO1-204ENST00000396840 FAM173BQ6P4H8 233 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 NFAT5O94916 1531 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 EVI5LQ96CN4 794 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 FAM13BQ9NYF5 915 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 TAF6LQ9Y6J9 622 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 CCDC171Q6TFL3 1326 aa22.01■■□□□ 1.11
IFFO1-204ENST00000396840 FER1L4A9Z1Z3 1794 aa22■■□□□ 1.11
IFFO1-204ENST00000396840 ZKSCAN1P17029 563 aaPredicted RBP22■■□□□ 1.11
IFFO1-204ENST00000396840 GLIPR1L2Q4G1C9 344 aa22■■□□□ 1.11
IFFO1-204ENST00000396840 VSIG10Q8N0Z9 540 aa22■■□□□ 1.11
IFFO1-204ENST00000396840 EDC3Q96F86 508 aaKnown RBP22■■□□□ 1.11
IFFO1-204ENST00000396840 MTMR6Q9Y217 621 aa22■■□□□ 1.11
IFFO1-204ENST00000396840 MED1Q15648 1581 aaPredicted RBP22■■□□□ 1.11
IFFO1-204ENST00000396840 ALDH1L1O75891 902 aa22■■□□□ 1.11
IFFO1-204ENST00000396840 VPS53Q5VIR6 699 aa22■■□□□ 1.11
IFFO1-204ENST00000396840 CREB3L3Q68CJ9 461 aa22■■□□□ 1.11
IFFO1-204ENST00000396840 TPCN1Q9ULQ1 816 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms