RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 RAD50Q92878 1312 aa16.06■□□□□ 0.16
TRIM40-207ENST00000396581 RAB11FIP3O75154 756 aa16.06■□□□□ 0.16
TRIM40-207ENST00000396581 LETM1O95202 739 aaPredicted RBP16.06■□□□□ 0.16
TRIM40-207ENST00000396581 UPF3BQ9BZI7 483 aaKnown RBP16.06■□□□□ 0.16
TRIM40-207ENST00000396581 USP44Q9H0E7 712 aa16.06■□□□□ 0.16
TRIM40-207ENST00000396581 FKBP5Q13451 457 aaPredicted RBP16.05■□□□□ 0.16
TRIM40-207ENST00000396581 CCDC183Q5T5S1 534 aa16.05■□□□□ 0.16
TRIM40-207ENST00000396581 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
TRIM40-207ENST00000396581 MAP3K5Q99683 1374 aa16.04■□□□□ 0.16
TRIM40-207ENST00000396581 SGSM2O43147 1006 aa16.04■□□□□ 0.16
TRIM40-207ENST00000396581 POLA2Q14181 598 aa16.04■□□□□ 0.16
TRIM40-207ENST00000396581 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
TRIM40-207ENST00000396581 LRRFIP2Q9Y608 721 aaKnown RBP16.04■□□□□ 0.16
TRIM40-207ENST00000396581 ABCC6O95255 1503 aa16.04■□□□□ 0.16
TRIM40-207ENST00000396581 IL17REQ8NFR9 667 aa16.04■□□□□ 0.16
TRIM40-207ENST00000396581 PIBF1Q8WXW3 757 aa16.04■□□□□ 0.16
TRIM40-207ENST00000396581 AMOTQ4VCS5 1084 aa16.03■□□□□ 0.16
TRIM40-207ENST00000396581 GDPD2Q9HCC8 539 aa16.03■□□□□ 0.16
TRIM40-207ENST00000396581 ZSCAN22P10073 491 aaPredicted RBP16.03■□□□□ 0.16
TRIM40-207ENST00000396581 NOL8Q76FK4 1167 aaKnown RBP16.03■□□□□ 0.16
TRIM40-207ENST00000396581 MYRIPQ8NFW9 859 aa16.03■□□□□ 0.16
TRIM40-207ENST00000396581 COL18A1P39060 1754 aa16.02■□□□□ 0.16
TRIM40-207ENST00000396581 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.16
TRIM40-207ENST00000396581 PTMAP06454 111 aaKnown RBP16.02■□□□□ 0.15
TRIM40-207ENST00000396581 UBE2HP62256 183 aa16.02■□□□□ 0.15
TRIM40-207ENST00000396581 PRIMPOLQ96LW4 560 aa16.02■□□□□ 0.15
TRIM40-207ENST00000396581 FUCA2Q9BTY2 467 aa16.02■□□□□ 0.15
TRIM40-207ENST00000396581 LSG1Q9H089 658 aaKnown RBP16.02■□□□□ 0.15
TRIM40-207ENST00000396581 SNX14Q9Y5W7 946 aa16.02■□□□□ 0.15
TRIM40-207ENST00000396581 USP42Q9H9J4 1324 aaKnown RBP16.02■□□□□ 0.15
TRIM40-207ENST00000396581 RGPD2P0DJD1 1756 aa16.02■□□□□ 0.15
TRIM40-207ENST00000396581 GTF2F1P35269 517 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRIM40-207ENST00000396581 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
TRIM40-207ENST00000396581 CEMIPQ8WUJ3 1361 aa16.01■□□□□ 0.15
TRIM40-207ENST00000396581 UBTFL1P0CB47 393 aaPredicted RBP16.01■□□□□ 0.15
TRIM40-207ENST00000396581 SPTLC3Q9NUV7 552 aa16.01■□□□□ 0.15
TRIM40-207ENST00000396581 ZSCAN21Q9Y5A6 473 aaPredicted RBP16■□□□□ 0.15
TRIM40-207ENST00000396581 LMO7Q8WWI1 1683 aa16■□□□□ 0.15
TRIM40-207ENST00000396581 RGPD5Q99666 1765 aa16■□□□□ 0.15
TRIM40-207ENST00000396581 STX6O43752 255 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 AKAP4Q5JQC9 854 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 RHPN1Q8TCX5 695 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 LIMCH1Q9UPQ0 1083 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 TCHHQ07283 1943 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 F13A1P00488 732 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 SYT1P21579 422 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 AK2P54819 239 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 HMGN5P82970 282 aaKnown RBP15.99■□□□□ 0.15
TRIM40-207ENST00000396581 TAF7Q15545 349 aaPredicted RBP15.99■□□□□ 0.15
TRIM40-207ENST00000396581 CHRNA2Q15822 529 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 RUFY3Q7L099 469 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 USP25Q9UHP3 1055 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 CNPY2Q9Y2B0 182 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 ATP6V1DQ9Y5K8 247 aa15.99■□□□□ 0.15
TRIM40-207ENST00000396581 NOLC1Q14978 699 aaKnown RBP eCLIP15.98■□□□□ 0.15
TRIM40-207ENST00000396581 NHSL1Q5SYE7 1610 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 LTBP4Q8N2S1 1624 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 KCNB2Q92953 911 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 KIF1BPQ96EK5 621 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 IL1RAPL2Q9NP60 686 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 KDM4AO75164 1064 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 ADCY5O95622 1261 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 PPP1R42Q7Z4L9 355 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 NUTM1Q86Y26 1132 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 RASEFQ8IZ41 740 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 CNTROBQ8N137 903 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 NLRP2Q9NX02 1062 aa15.98■□□□□ 0.15
TRIM40-207ENST00000396581 PLEKHG2Q9H7P9 1386 aa15.97■□□□□ 0.15
TRIM40-207ENST00000396581 ZNF530Q6P9A1 599 aaPredicted RBP15.97■□□□□ 0.15
TRIM40-207ENST00000396581 TTC41PQ6P2S7 1318 aa15.96■□□□□ 0.15
TRIM40-207ENST00000396581 SURF6O75683 361 aaKnown RBP15.96■□□□□ 0.15
TRIM40-207ENST00000396581 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
TRIM40-207ENST00000396581 FOXD4L6Q3SYB3 417 aaPredicted RBP15.96■□□□□ 0.15
TRIM40-207ENST00000396581 FOXD4L3Q6VB84 417 aaPredicted RBP15.96■□□□□ 0.15
TRIM40-207ENST00000396581 LGR6Q9HBX8 967 aa15.96■□□□□ 0.15
TRIM40-207ENST00000396581 PRDM11Q9NQV5 511 aa15.96■□□□□ 0.15
TRIM40-207ENST00000396581 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRIM40-207ENST00000396581 SMAP1Q8IYB5 467 aaPredicted RBP15.95■□□□□ 0.14
TRIM40-207ENST00000396581 RAPGEF4Q8WZA2 1011 aa15.95■□□□□ 0.14
TRIM40-207ENST00000396581 TM6SF1Q9BZW5 370 aa15.95■□□□□ 0.14
TRIM40-207ENST00000396581 HYPKQ9NX55 129 aa15.95■□□□□ 0.14
TRIM40-207ENST00000396581 CSB-PGBD3P0DP91 1061 aa15.95■□□□□ 0.14
TRIM40-207ENST00000396581 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
TRIM40-207ENST00000396581 PRDM4Q9UKN5 801 aa15.95■□□□□ 0.14
TRIM40-207ENST00000396581 SMC3Q9UQE7 1217 aa15.95■□□□□ 0.14
TRIM40-207ENST00000396581 HSP90AB4PQ58FF6 505 aa15.94■□□□□ 0.14
TRIM40-207ENST00000396581 VPS53Q5VIR6 699 aa15.94■□□□□ 0.14
TRIM40-207ENST00000396581 MTMR6Q9Y217 621 aa15.94■□□□□ 0.14
TRIM40-207ENST00000396581 PDIA4P13667 645 aaKnown RBP15.93■□□□□ 0.14
TRIM40-207ENST00000396581 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
TRIM40-207ENST00000396581 ZSCAN31Q96LW9 406 aaPredicted RBP15.93■□□□□ 0.14
TRIM40-207ENST00000396581 CCDC94Q9BW85 323 aaPredicted RBP15.93■□□□□ 0.14
TRIM40-207ENST00000396581 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
TRIM40-207ENST00000396581 SH2B1Q9NRF2 756 aaPredicted RBP15.93■□□□□ 0.14
TRIM40-207ENST00000396581 OVOS2A0A0G2JMS6 1433 aa15.93■□□□□ 0.14
TRIM40-207ENST00000396581 HOXB7P09629 217 aa15.93■□□□□ 0.14
TRIM40-207ENST00000396581 MTX1Q13505 466 aa15.93■□□□□ 0.14
TRIM40-207ENST00000396581 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
TRIM40-207ENST00000396581 ZNF830Q96NB3 372 aaPredicted RBP15.93■□□□□ 0.14
TRIM40-207ENST00000396581 PHAXQ9H814 394 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms