RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ERC2O15083 957 aa18.35■□□□□ 0.53
CBX3-202ENST00000396386 COPS6Q7L5N1 327 aa18.35■□□□□ 0.53
CBX3-202ENST00000396386 LRP10Q7Z4F1 713 aa18.35■□□□□ 0.53
CBX3-202ENST00000396386 METTL22Q9BUU2 404 aaPredicted RBP18.35■□□□□ 0.53
CBX3-202ENST00000396386 IGKV5-2P06315 115 aa18.35■□□□□ 0.53
CBX3-202ENST00000396386 USP26Q9BXU7 913 aa18.35■□□□□ 0.53
CBX3-202ENST00000396386 NEURL1BA8MQ27 555 aa18.34■□□□□ 0.53
CBX3-202ENST00000396386 OS9Q13438 667 aaPredicted RBP18.34■□□□□ 0.53
CBX3-202ENST00000396386 SUCLG2Q96I99 432 aa18.34■□□□□ 0.53
CBX3-202ENST00000396386 ERC1Q8IUD2 1116 aa18.33■□□□□ 0.53
CBX3-202ENST00000396386 MYD88Q99836 296 aa18.33■□□□□ 0.53
CBX3-202ENST00000396386 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.52
CBX3-202ENST00000396386 TOM1O60784 492 aa18.33■□□□□ 0.52
CBX3-202ENST00000396386 RABEP1Q15276 862 aa18.33■□□□□ 0.52
CBX3-202ENST00000396386 ANKRD13DQ6ZTN6 518 aa18.33■□□□□ 0.52
CBX3-202ENST00000396386 NUTM1Q86Y26 1132 aa18.33■□□□□ 0.52
CBX3-202ENST00000396386 ITGB4P16144 1822 aa18.32■□□□□ 0.52
CBX3-202ENST00000396386 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
CBX3-202ENST00000396386 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
CBX3-202ENST00000396386 TJP1Q07157 1748 aa18.32■□□□□ 0.52
CBX3-202ENST00000396386 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
CBX3-202ENST00000396386 HSPA1LP34931 641 aa18.31■□□□□ 0.52
CBX3-202ENST00000396386 DEKP35659 375 aaKnown RBP18.31■□□□□ 0.52
CBX3-202ENST00000396386 GCKRQ14397 625 aa18.31■□□□□ 0.52
CBX3-202ENST00000396386 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
CBX3-202ENST00000396386 BICC1Q9H694 974 aaKnown RBP18.31■□□□□ 0.52
CBX3-202ENST00000396386 LRP6O75581 1613 aa18.31■□□□□ 0.52
CBX3-202ENST00000396386 USP42Q9H9J4 1324 aaKnown RBP18.31■□□□□ 0.52
CBX3-202ENST00000396386 DISP2A7MBM2 1401 aa18.31■□□□□ 0.52
CBX3-202ENST00000396386 PIP4K2AP48426 406 aaPredicted RBP18.31■□□□□ 0.52
CBX3-202ENST00000396386 CHMP5Q9NZZ3 219 aa18.31■□□□□ 0.52
CBX3-202ENST00000396386 PHLPP1O60346 1717 aa18.3■□□□□ 0.52
CBX3-202ENST00000396386 KAZALD1Q96I82 304 aa18.3■□□□□ 0.52
CBX3-202ENST00000396386 ESYT1Q9BSJ8 1104 aa18.3■□□□□ 0.52
CBX3-202ENST00000396386 BTG4Q9NY30 223 aa18.3■□□□□ 0.52
CBX3-202ENST00000396386 COL15A1P39059 1388 aa18.29■□□□□ 0.52
CBX3-202ENST00000396386 K7ELQ4 463 aaPredicted RBP18.29■□□□□ 0.52
CBX3-202ENST00000396386 PIP4K2BP78356 416 aa18.29■□□□□ 0.52
CBX3-202ENST00000396386 PLBD2Q8NHP8 589 aa18.29■□□□□ 0.52
CBX3-202ENST00000396386 PI4K2BQ8TCG2 481 aa18.29■□□□□ 0.52
CBX3-202ENST00000396386 TTC41PQ6P2S7 1318 aa18.29■□□□□ 0.52
CBX3-202ENST00000396386 CHMLP26374 656 aa18.29■□□□□ 0.52
CBX3-202ENST00000396386 CLASRPQ8N2M8 674 aaKnown RBP18.29■□□□□ 0.52
CBX3-202ENST00000396386 RBM42Q9BTD8 480 aaKnown RBP18.29■□□□□ 0.52
CBX3-202ENST00000396386 PA2G4Q9UQ80 394 aaKnown RBP18.28■□□□□ 0.52
CBX3-202ENST00000396386 NRAPQ86VF7 1730 aa18.27■□□□□ 0.52
CBX3-202ENST00000396386 CD2BP2O95400 341 aaKnown RBP18.27■□□□□ 0.52
CBX3-202ENST00000396386 GPATCH3Q96I76 525 aa18.27■□□□□ 0.52
CBX3-202ENST00000396386 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
CBX3-202ENST00000396386 NBPF14Q5TI25 921 aa18.26■□□□□ 0.51
CBX3-202ENST00000396386 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
CBX3-202ENST00000396386 UNC5CLQ8IV45 518 aa18.26■□□□□ 0.51
CBX3-202ENST00000396386 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
CBX3-202ENST00000396386 TMOD3Q9NYL9 352 aa18.26■□□□□ 0.51
CBX3-202ENST00000396386 CNTROBQ8N137 903 aa18.26■□□□□ 0.51
CBX3-202ENST00000396386 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.25■□□□□ 0.51
CBX3-202ENST00000396386 GLRX3O76003 335 aaKnown RBP18.25■□□□□ 0.51
CBX3-202ENST00000396386 MCCP23508 829 aa18.25■□□□□ 0.51
CBX3-202ENST00000396386 G3BP1Q13283 466 aaKnown RBP eCLIP18.25■□□□□ 0.51
CBX3-202ENST00000396386 PTCD1O75127 700 aaKnown RBP18.24■□□□□ 0.51
CBX3-202ENST00000396386 IFIT2P09913 472 aaKnown RBP18.24■□□□□ 0.51
CBX3-202ENST00000396386 DDIT3P35638 169 aa18.24■□□□□ 0.51
CBX3-202ENST00000396386 CIZ1Q9ULV3 898 aaPredicted RBP18.24■□□□□ 0.51
CBX3-202ENST00000396386 DOT1LQ8TEK3 1739 aa18.24■□□□□ 0.51
CBX3-202ENST00000396386 HSP90AA1P07900 732 aaKnown RBP18.24■□□□□ 0.51
CBX3-202ENST00000396386 UBE3BQ7Z3V4 1068 aa18.23■□□□□ 0.51
CBX3-202ENST00000396386 ECHDC1Q9NTX5 307 aa18.23■□□□□ 0.51
CBX3-202ENST00000396386 EPB41L2O43491 1005 aaKnown RBP18.22■□□□□ 0.51
CBX3-202ENST00000396386 ST18O60284 1047 aa18.22■□□□□ 0.51
CBX3-202ENST00000396386 EPHA10Q5JZY3 1008 aa18.22■□□□□ 0.51
CBX3-202ENST00000396386 AACSQ86V21 672 aa18.22■□□□□ 0.51
CBX3-202ENST00000396386 ANO2Q9NQ90 1003 aa18.22■□□□□ 0.51
CBX3-202ENST00000396386 A0A087WZG4 1122 aa18.22■□□□□ 0.51
CBX3-202ENST00000396386 ATP5J2-PTCD1G3V325 749 aa18.22■□□□□ 0.51
CBX3-202ENST00000396386 MAP4K4O95819 1239 aaPredicted RBP18.22■□□□□ 0.51
CBX3-202ENST00000396386 A1BGP04217 495 aa18.22■□□□□ 0.51
CBX3-202ENST00000396386 SASH1O94885 1247 aa18.21■□□□□ 0.51
CBX3-202ENST00000396386 RABL6Q3YEC7 729 aaPredicted RBP18.21■□□□□ 0.51
CBX3-202ENST00000396386 TTLL7Q6ZT98 887 aa18.21■□□□□ 0.51
CBX3-202ENST00000396386 CASP7P55210 303 aa18.2■□□□□ 0.5
CBX3-202ENST00000396386 ANAPC15P60006 121 aa18.2■□□□□ 0.5
CBX3-202ENST00000396386 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
CBX3-202ENST00000396386 SIL1Q9H173 461 aa18.2■□□□□ 0.5
CBX3-202ENST00000396386 COPRSQ9NQ92 184 aa18.2■□□□□ 0.5
CBX3-202ENST00000396386 NWD2Q9ULI1 1742 aa18.19■□□□□ 0.5
CBX3-202ENST00000396386 CWC25Q9NXE8 425 aaPredicted RBP18.19■□□□□ 0.5
CBX3-202ENST00000396386 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
CBX3-202ENST00000396386 BCL9O00512 1426 aa18.19■□□□□ 0.5
CBX3-202ENST00000396386 PIGBQ92521 554 aa18.18■□□□□ 0.5
CBX3-202ENST00000396386 JARID2Q92833 1246 aaPredicted RBP18.18■□□□□ 0.5
CBX3-202ENST00000396386 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
CBX3-202ENST00000396386 SGSM2O43147 1006 aa18.18■□□□□ 0.5
CBX3-202ENST00000396386 RFX5P48382 616 aaPredicted RBP18.18■□□□□ 0.5
CBX3-202ENST00000396386 H7C1W4 665 aa18.17■□□□□ 0.5
CBX3-202ENST00000396386 KLHDC4Q8TBB5 520 aa18.17■□□□□ 0.5
CBX3-202ENST00000396386 EAF2Q96CJ1 260 aaPredicted RBP18.17■□□□□ 0.5
CBX3-202ENST00000396386 IL17RAQ96F46 866 aa18.17■□□□□ 0.5
CBX3-202ENST00000396386 ZBTB3Q9H5J0 574 aa18.17■□□□□ 0.5
CBX3-202ENST00000396386 RAD50Q92878 1312 aa18.16■□□□□ 0.5
CBX3-202ENST00000396386 GSE1Q14687 1217 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms