RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 USPL1Q5W0Q7 1092 aa27.2■■□□□ 1.94
FXN-202ENST00000396364 CLEC4GQ6UXB4 293 aa27.2■■□□□ 1.94
FXN-202ENST00000396364 ANKRD13DQ6ZTN6 518 aa27.2■■□□□ 1.94
FXN-202ENST00000396364 FLIIQ13045 1269 aa27.19■■□□□ 1.94
FXN-202ENST00000396364 HSP90AB3PQ58FF7 597 aa27.19■■□□□ 1.94
FXN-202ENST00000396364 PLBD2Q8NHP8 589 aa27.19■■□□□ 1.94
FXN-202ENST00000396364 MTFR1LQ9H019 292 aa27.19■■□□□ 1.94
FXN-202ENST00000396364 PHAXQ9H814 394 aaKnown RBP27.19■■□□□ 1.94
FXN-202ENST00000396364 KIF16BQ96L93 1317 aa27.18■■□□□ 1.94
FXN-202ENST00000396364 FKBP5Q13451 457 aaPredicted RBP27.18■■□□□ 1.94
FXN-202ENST00000396364 TTLL7Q6ZT98 887 aa27.18■■□□□ 1.94
FXN-202ENST00000396364 RIC3Q7Z5B4 369 aa27.18■■□□□ 1.94
FXN-202ENST00000396364 PTPRCP08575 1304 aa27.17■■□□□ 1.94
FXN-202ENST00000396364 CAMTA2O94983 1202 aa27.17■■□□□ 1.94
FXN-202ENST00000396364 GYS1P13807 737 aa27.17■■□□□ 1.94
FXN-202ENST00000396364 MRPL50Q8N5N7 158 aaKnown RBP27.17■■□□□ 1.94
FXN-202ENST00000396364 ZBTB3Q9H5J0 574 aa27.17■■□□□ 1.94
FXN-202ENST00000396364 SRP68Q9UHB9 627 aaKnown RBP27.17■■□□□ 1.94
FXN-202ENST00000396364 BRPF1P55201 1214 aaPredicted RBP27.16■■□□□ 1.94
FXN-202ENST00000396364 BCL2L13Q9BXK5 485 aa27.16■■□□□ 1.94
FXN-202ENST00000396364 GIGYF2Q6Y7W6 1299 aaKnown RBP27.15■■□□□ 1.94
FXN-202ENST00000396364 NUP98P52948 1817 aa27.14■■□□□ 1.94
FXN-202ENST00000396364 IPO8O15397 1037 aaKnown RBP27.14■■□□□ 1.94
FXN-202ENST00000396364 POLD1P28340 1107 aa27.14■■□□□ 1.94
FXN-202ENST00000396364 KSR2Q6VAB6 950 aa27.14■■□□□ 1.94
FXN-202ENST00000396364 RCAN3Q9UKA8 241 aa27.14■■□□□ 1.94
FXN-202ENST00000396364 ZBTB7AO95365 584 aa27.13■■□□□ 1.93
FXN-202ENST00000396364 PDGFDQ9GZP0 370 aaPredicted RBP27.13■■□□□ 1.93
FXN-202ENST00000396364 ARFGEF2Q9Y6D5 1785 aa27.12■■□□□ 1.93
FXN-202ENST00000396364 NEXNQ0ZGT2 675 aa27.12■■□□□ 1.93
FXN-202ENST00000396364 G2E3Q7L622 706 aa27.12■■□□□ 1.93
FXN-202ENST00000396364 SPON1Q9HCB6 807 aa27.12■■□□□ 1.93
FXN-202ENST00000396364 FKBP8Q14318 412 aa27.11■■□□□ 1.93
FXN-202ENST00000396364 SETDB2Q96T68 719 aa27.11■■□□□ 1.93
FXN-202ENST00000396364 ATP10DQ9P241 1426 aa27.1■■□□□ 1.93
FXN-202ENST00000396364 PI4KAP2A4QPH2 592 aa27.1■■□□□ 1.93
FXN-202ENST00000396364 PI4KAP1Q8N8J0 262 aa27.1■■□□□ 1.93
FXN-202ENST00000396364 MAP3K2Q9Y2U5 619 aa27.1■■□□□ 1.93
FXN-202ENST00000396364 ANKRD36CQ5JPF3 1778 aa27.09■■□□□ 1.93
FXN-202ENST00000396364 HLFQ16534 295 aa27.09■■□□□ 1.93
FXN-202ENST00000396364 MSL1Q68DK7 614 aa27.09■■□□□ 1.93
FXN-202ENST00000396364 API5Q9BZZ5 524 aaKnown RBP27.09■■□□□ 1.93
FXN-202ENST00000396364 BCL2L12Q9HB09 334 aa27.09■■□□□ 1.93
FXN-202ENST00000396364 PARP3Q9Y6F1 533 aa27.09■■□□□ 1.93
FXN-202ENST00000396364 TCIRG1Q13488 830 aa27.08■■□□□ 1.93
FXN-202ENST00000396364 DNAAF4Q8WXU2 420 aa27.08■■□□□ 1.93
FXN-202ENST00000396364 ARHGAP45Q92619 1136 aa27.08■■□□□ 1.93
FXN-202ENST00000396364 NIP7Q9Y221 180 aaKnown RBP eCLIP27.08■■□□□ 1.93
FXN-202ENST00000396364 ATF5Q9Y2D1 282 aaPredicted RBP27.08■■□□□ 1.93
FXN-202ENST00000396364 CARMIL3Q8ND23 1372 aa27.08■■□□□ 1.93
FXN-202ENST00000396364 COL24A1Q17RW2 1714 aa27.07■■□□□ 1.92
FXN-202ENST00000396364 BCAR3O75815 825 aa27.07■■□□□ 1.92
FXN-202ENST00000396364 PARP10Q53GL7 1025 aa27.07■■□□□ 1.92
FXN-202ENST00000396364 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.07■■□□□ 1.92
FXN-202ENST00000396364 METTL22Q9BUU2 404 aaPredicted RBP27.07■■□□□ 1.92
FXN-202ENST00000396364 NOB1Q9ULX3 412 aaKnown RBP27.07■■□□□ 1.92
FXN-202ENST00000396364 MMP10P09238 476 aa27.06■■□□□ 1.92
FXN-202ENST00000396364 TBC1D9BQ66K14 1250 aa27.06■■□□□ 1.92
FXN-202ENST00000396364 BICDL1Q6ZP65 573 aa27.06■■□□□ 1.92
FXN-202ENST00000396364 FRAT1Q92837 279 aaPredicted RBP27.06■■□□□ 1.92
FXN-202ENST00000396364 ADCY9O60503 1353 aa27.06■■□□□ 1.92
FXN-202ENST00000396364 NPHP1O15259 732 aa27.05■■□□□ 1.92
FXN-202ENST00000396364 NFIXQ14938 502 aa27.05■■□□□ 1.92
FXN-202ENST00000396364 TM4SF1P30408 202 aa27.04■■□□□ 1.92
FXN-202ENST00000396364 ZKSCAN2Q63HK3 967 aa27.04■■□□□ 1.92
FXN-202ENST00000396364 PPP1R42Q7Z4L9 355 aa27.04■■□□□ 1.92
FXN-202ENST00000396364 MYD88Q99836 296 aa27.04■■□□□ 1.92
FXN-202ENST00000396364 NYXQ9GZU5 481 aa27.04■■□□□ 1.92
FXN-202ENST00000396364 MS4A1P11836 297 aa27.03■■□□□ 1.92
FXN-202ENST00000396364 ZNF34Q8IZ26 560 aa27.03■■□□□ 1.92
FXN-202ENST00000396364 GPTP24298 496 aa27.02■■□□□ 1.92
FXN-202ENST00000396364 TRIM28Q13263 835 aaKnown RBP27.02■■□□□ 1.92
FXN-202ENST00000396364 SLC4A10Q6U841 1118 aa27.02■■□□□ 1.92
FXN-202ENST00000396364 PXDNLA1KZ92 1463 aa27.01■■□□□ 1.91
FXN-202ENST00000396364 ATF7IPQ6VMQ6 1270 aa27.01■■□□□ 1.91
FXN-202ENST00000396364 TPTE2Q6XPS3 522 aa27.01■■□□□ 1.91
FXN-202ENST00000396364 NBPF5PQ86XG9 351 aaPredicted RBP27.01■■□□□ 1.91
FXN-202ENST00000396364 CCDC191Q8NCU4 936 aa27.01■■□□□ 1.91
FXN-202ENST00000396364 LINS1Q8NG48 757 aa27.01■■□□□ 1.91
FXN-202ENST00000396364 IBTKQ9P2D0 1353 aaPredicted RBP27■■□□□ 1.91
FXN-202ENST00000396364 RNF123Q5XPI4 1314 aa27■■□□□ 1.91
FXN-202ENST00000396364 GTF2E1P29083 439 aaPredicted RBP27■■□□□ 1.91
FXN-202ENST00000396364 ISCA1Q9BUE6 129 aa27■■□□□ 1.91
FXN-202ENST00000396364 AFDNP55196 1824 aaKnown RBP27■■□□□ 1.91
FXN-202ENST00000396364 F6X3S4 739 aa26.99■■□□□ 1.91
FXN-202ENST00000396364 POLRMTO00411 1230 aaKnown RBP26.99■■□□□ 1.91
FXN-202ENST00000396364 SERPINB2P05120 415 aa26.99■■□□□ 1.91
FXN-202ENST00000396364 CWC25Q9NXE8 425 aaPredicted RBP26.99■■□□□ 1.91
FXN-202ENST00000396364 ATP5J2-PTCD1G3V325 749 aa26.98■■□□□ 1.91
FXN-202ENST00000396364 NLRP10Q86W26 655 aa26.98■■□□□ 1.91
FXN-202ENST00000396364 FTSJ3Q8IY81 847 aaKnown RBP26.98■■□□□ 1.91
FXN-202ENST00000396364 CNBD1Q8NA66 436 aa26.98■■□□□ 1.91
FXN-202ENST00000396364 UTP14AQ9BVJ6 771 aaKnown RBP26.98■■□□□ 1.91
FXN-202ENST00000396364 SRCIN1Q9C0H9 1055 aa26.98■■□□□ 1.91
FXN-202ENST00000396364 HSP90B1P14625 803 aaKnown RBP26.97■■□□□ 1.91
FXN-202ENST00000396364 CCT4P50991 539 aaKnown RBP26.97■■□□□ 1.91
FXN-202ENST00000396364 ST5P78524 1137 aa26.97■■□□□ 1.91
FXN-202ENST00000396364 DDR1Q08345 913 aa26.97■■□□□ 1.91
FXN-202ENST00000396364 PPP1R1BQ9UD71 204 aaPredicted RBP26.97■■□□□ 1.91
FXN-202ENST00000396364 UBN2Q6ZU65 1347 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms