RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 ZNF622Q969S3 477 aaKnown RBP eCLIP13.35□□□□□ -0.27
LDHC-202ENST00000396215 ZBTB1Q9Y2K1 713 aa13.35□□□□□ -0.27
LDHC-202ENST00000396215 COL11A2P13942 1736 aaPredicted RBP13.35□□□□□ -0.27
LDHC-202ENST00000396215 SLX4Q8IY92 1834 aa13.34□□□□□ -0.27
LDHC-202ENST00000396215 STYK1Q6J9G0 422 aa13.34□□□□□ -0.27
LDHC-202ENST00000396215 PNMA8AQ86V59 439 aaPredicted RBP13.34□□□□□ -0.27
LDHC-202ENST00000396215 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
LDHC-202ENST00000396215 CNKSR1Q969H4 720 aa13.34□□□□□ -0.27
LDHC-202ENST00000396215 ARFGEF2Q9Y6D5 1785 aa13.34□□□□□ -0.27
LDHC-202ENST00000396215 EIF5P55010 431 aaKnown RBP13.33□□□□□ -0.28
LDHC-202ENST00000396215 PRR5LQ6MZQ0 368 aa13.33□□□□□ -0.28
LDHC-202ENST00000396215 CNTROBQ8N137 903 aa13.33□□□□□ -0.28
LDHC-202ENST00000396215 C7orf43Q8WVR3 580 aa13.33□□□□□ -0.28
LDHC-202ENST00000396215 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
LDHC-202ENST00000396215 HACL1Q9UJ83 578 aa13.33□□□□□ -0.28
LDHC-202ENST00000396215 MRC1P22897 1456 aa13.32□□□□□ -0.28
LDHC-202ENST00000396215 SRGNP10124 158 aa13.32□□□□□ -0.28
LDHC-202ENST00000396215 EPHX2P34913 555 aa13.32□□□□□ -0.28
LDHC-202ENST00000396215 A0A087WZG4 1122 aa13.31□□□□□ -0.28
LDHC-202ENST00000396215 EAPPQ56P03 285 aaPredicted RBP13.31□□□□□ -0.28
LDHC-202ENST00000396215 TBC1D9BQ66K14 1250 aa13.31□□□□□ -0.28
LDHC-202ENST00000396215 ECE1P42892 770 aa13.3□□□□□ -0.28
LDHC-202ENST00000396215 AKAP4Q5JQC9 854 aa13.3□□□□□ -0.28
LDHC-202ENST00000396215 PRPF40BQ6NWY9 871 aaKnown RBP13.3□□□□□ -0.28
LDHC-202ENST00000396215 MASTLQ96GX5 879 aa13.3□□□□□ -0.28
LDHC-202ENST00000396215 BEGAINQ9BUH8 593 aa13.3□□□□□ -0.28
LDHC-202ENST00000396215 DDX21Q9NR30 783 aaKnown RBP eCLIP13.3□□□□□ -0.28
LDHC-202ENST00000396215 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
LDHC-202ENST00000396215 FZD9O00144 591 aa13.29□□□□□ -0.28
LDHC-202ENST00000396215 MAP2K2P36507 400 aa13.29□□□□□ -0.28
LDHC-202ENST00000396215 MAP1SQ66K74 1059 aaPredicted RBP13.29□□□□□ -0.28
LDHC-202ENST00000396215 BICDL1Q6ZP65 573 aa13.29□□□□□ -0.28
LDHC-202ENST00000396215 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
LDHC-202ENST00000396215 CAPNS2Q96L46 248 aa13.29□□□□□ -0.28
LDHC-202ENST00000396215 GPR101Q96P66 508 aaPredicted RBP13.29□□□□□ -0.28
LDHC-202ENST00000396215 ABT1Q9ULW3 272 aaKnown RBP13.29□□□□□ -0.28
LDHC-202ENST00000396215 ZNF541Q9H0D2 1346 aa13.29□□□□□ -0.28
LDHC-202ENST00000396215 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
LDHC-202ENST00000396215 CA12O43570 354 aa13.28□□□□□ -0.28
LDHC-202ENST00000396215 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
LDHC-202ENST00000396215 SLC39A6Q13433 755 aa13.28□□□□□ -0.28
LDHC-202ENST00000396215 CCDC93Q567U6 631 aa13.28□□□□□ -0.28
LDHC-202ENST00000396215 MCOLN1Q9GZU1 580 aa13.28□□□□□ -0.28
LDHC-202ENST00000396215 LGR6Q9HBX8 967 aa13.28□□□□□ -0.28
LDHC-202ENST00000396215 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.28
LDHC-202ENST00000396215 STARD3NLO95772 234 aa13.27□□□□□ -0.29
LDHC-202ENST00000396215 GPC2Q8N158 579 aa13.27□□□□□ -0.29
LDHC-202ENST00000396215 LTBP1Q14766 1721 aa13.27□□□□□ -0.29
LDHC-202ENST00000396215 CACNA1SQ13698 1873 aa13.27□□□□□ -0.29
LDHC-202ENST00000396215 KLRG2A4D1S0 409 aaPredicted RBP13.26□□□□□ -0.29
LDHC-202ENST00000396215 RNMTO43148 476 aaKnown RBP13.26□□□□□ -0.29
LDHC-202ENST00000396215 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
LDHC-202ENST00000396215 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
LDHC-202ENST00000396215 TRPM7Q96QT4 1865 aa13.25□□□□□ -0.29
LDHC-202ENST00000396215 RNF123Q5XPI4 1314 aa13.25□□□□□ -0.29
LDHC-202ENST00000396215 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
LDHC-202ENST00000396215 TNNT2P45379 298 aaPredicted RBP13.25□□□□□ -0.29
LDHC-202ENST00000396215 CYP4F22Q6NT55 531 aa13.25□□□□□ -0.29
LDHC-202ENST00000396215 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
LDHC-202ENST00000396215 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
LDHC-202ENST00000396215 SETDB2Q96T68 719 aa13.25□□□□□ -0.29
LDHC-202ENST00000396215 TLL2Q9Y6L7 1015 aa13.25□□□□□ -0.29
LDHC-202ENST00000396215 CASP8AP2Q9UKL3 1982 aa13.24□□□□□ -0.29
LDHC-202ENST00000396215 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
LDHC-202ENST00000396215 ST5P78524 1137 aa13.24□□□□□ -0.29
LDHC-202ENST00000396215 CST9Q5W186 159 aa13.24□□□□□ -0.29
LDHC-202ENST00000396215 RTKN2Q8IZC4 609 aa13.24□□□□□ -0.29
LDHC-202ENST00000396215 ZNF277Q9NRM2 450 aaPredicted RBP13.24□□□□□ -0.29
LDHC-202ENST00000396215 NPR1P16066 1061 aa13.23□□□□□ -0.29
LDHC-202ENST00000396215 IL13P35225 146 aa13.23□□□□□ -0.29
LDHC-202ENST00000396215 HHIPL1Q96JK4 782 aa13.23□□□□□ -0.29
LDHC-202ENST00000396215 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
LDHC-202ENST00000396215 SSUH2Q9Y2M2 353 aa13.23□□□□□ -0.29
LDHC-202ENST00000396215 SNED1Q8TER0 1413 aa13.22□□□□□ -0.29
LDHC-202ENST00000396215 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
LDHC-202ENST00000396215 IARSP41252 1262 aaKnown RBP13.22□□□□□ -0.29
LDHC-202ENST00000396215 BRPF1P55201 1214 aaPredicted RBP13.22□□□□□ -0.29
LDHC-202ENST00000396215 TBC1D2BQ9UPU7 963 aa13.22□□□□□ -0.29
LDHC-202ENST00000396215 USP50Q70EL3 339 aaPredicted RBP13.21□□□□□ -0.29
LDHC-202ENST00000396215 PSMD1Q99460 953 aa13.21□□□□□ -0.29
LDHC-202ENST00000396215 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
LDHC-202ENST00000396215 AOC2O75106 756 aa13.2□□□□□ -0.3
LDHC-202ENST00000396215 FMR1Q06787 632 aaKnown RBP eCLIP13.2□□□□□ -0.3
LDHC-202ENST00000396215 DGKZQ13574 1117 aa13.2□□□□□ -0.3
LDHC-202ENST00000396215 PRPF38BQ5VTL8 546 aaKnown RBP13.2□□□□□ -0.3
LDHC-202ENST00000396215 CLEC4GQ6UXB4 293 aa13.2□□□□□ -0.3
LDHC-202ENST00000396215 SAPCD2Q86UD0 394 aa13.2□□□□□ -0.3
LDHC-202ENST00000396215 SYNE4Q8N205 404 aa13.2□□□□□ -0.3
LDHC-202ENST00000396215 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
LDHC-202ENST00000396215 BCORQ6W2J9 1755 aa13.2□□□□□ -0.3
LDHC-202ENST00000396215 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
LDHC-202ENST00000396215 RGL2O15211 777 aa13.19□□□□□ -0.3
LDHC-202ENST00000396215 SCNN1DP51172 638 aa13.19□□□□□ -0.3
LDHC-202ENST00000396215 PAXIP1Q6ZW49 1069 aaPredicted RBP13.19□□□□□ -0.3
LDHC-202ENST00000396215 NPHP1O15259 732 aa13.18□□□□□ -0.3
LDHC-202ENST00000396215 LMOD1P29536 600 aaPredicted RBP13.18□□□□□ -0.3
LDHC-202ENST00000396215 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
LDHC-202ENST00000396215 TTC5Q8N0Z6 440 aa13.18□□□□□ -0.3
LDHC-202ENST00000396215 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
LDHC-202ENST00000396215 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms