RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 CRY2Q49AN0 593 aa8.64□□□□□ -1.03
LMO3-205ENST00000396205 USP16Q9Y5T5 823 aa8.64□□□□□ -1.03
LMO3-205ENST00000396205 GNAI1P63096 354 aa8.64□□□□□ -1.03
LMO3-205ENST00000396205 MSL1Q68DK7 614 aa8.64□□□□□ -1.03
LMO3-205ENST00000396205 NYXQ9GZU5 481 aa8.64□□□□□ -1.03
LMO3-205ENST00000396205 SRP68Q9UHB9 627 aaKnown RBP8.64□□□□□ -1.03
LMO3-205ENST00000396205 DUOX1Q9NRD9 1551 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 SERPINB2P05120 415 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 PARP10Q53GL7 1025 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 DZIP3Q86Y13 1208 aaKnown RBP8.63□□□□□ -1.03
LMO3-205ENST00000396205 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 PIM2Q9P1W9 311 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 A0A1B0GUL6 1792 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 CCDC88AQ3V6T2 1871 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 SLX4Q8IY92 1834 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 ZNF609O15014 1411 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 MSH5O43196 834 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 HSP90AB3PQ58FF7 597 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 WDR63Q8IWG1 891 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 SLC10A5Q5PT55 438 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 VPS33BQ9H267 617 aa8.63□□□□□ -1.03
LMO3-205ENST00000396205 DDX21Q9NR30 783 aaKnown RBP eCLIP8.63□□□□□ -1.03
LMO3-205ENST00000396205 TRIM28Q13263 835 aaKnown RBP8.62□□□□□ -1.03
LMO3-205ENST00000396205 TBC1D9BQ66K14 1250 aa8.62□□□□□ -1.03
LMO3-205ENST00000396205 PRR5LQ6MZQ0 368 aa8.62□□□□□ -1.03
LMO3-205ENST00000396205 TSPYL4Q9UJ04 414 aa8.62□□□□□ -1.03
LMO3-205ENST00000396205 ZNF646O15015 1829 aaPredicted RBP8.62□□□□□ -1.03
LMO3-205ENST00000396205 ZNF521Q96K83 1311 aa8.62□□□□□ -1.03
LMO3-205ENST00000396205 YY1P25490 414 aa8.62□□□□□ -1.03
LMO3-205ENST00000396205 HOXA10P31260 410 aaPredicted RBP8.62□□□□□ -1.03
LMO3-205ENST00000396205 GIGYF2Q6Y7W6 1299 aaKnown RBP8.62□□□□□ -1.03
LMO3-205ENST00000396205 DCTN1Q14203 1278 aa8.62□□□□□ -1.03
LMO3-205ENST00000396205 ANP32CO43423 234 aa8.61□□□□□ -1.03
LMO3-205ENST00000396205 A1BGP04217 495 aa8.61□□□□□ -1.03
LMO3-205ENST00000396205 ST5P78524 1137 aa8.61□□□□□ -1.03
LMO3-205ENST00000396205 CCER2I3L3R5 266 aa8.61□□□□□ -1.03
LMO3-205ENST00000396205 DPEP1P16444 411 aa8.61□□□□□ -1.03
LMO3-205ENST00000396205 ERICH6Q7L0X2 663 aa8.61□□□□□ -1.03
LMO3-205ENST00000396205 SETDB2Q96T68 719 aa8.61□□□□□ -1.03
LMO3-205ENST00000396205 HYPKQ9NX55 129 aa8.61□□□□□ -1.03
LMO3-205ENST00000396205 GPR162Q16538 588 aa8.6□□□□□ -1.03
LMO3-205ENST00000396205 DALRD3Q5D0E6 543 aaKnown RBP8.6□□□□□ -1.03
LMO3-205ENST00000396205 CANXP27824 592 aaKnown RBP8.6□□□□□ -1.03
LMO3-205ENST00000396205 CC2D2BQ6DHV5 1058 aa8.6□□□□□ -1.03
LMO3-205ENST00000396205 KIF6Q6ZMV9 814 aa8.6□□□□□ -1.03
LMO3-205ENST00000396205 DBF4Q9UBU7 674 aaPredicted RBP8.6□□□□□ -1.03
LMO3-205ENST00000396205 SRGNP10124 158 aa8.6□□□□□ -1.03
LMO3-205ENST00000396205 C7orf43Q8WVR3 580 aa8.6□□□□□ -1.03
LMO3-205ENST00000396205 CNKSR1Q969H4 720 aa8.6□□□□□ -1.03
LMO3-205ENST00000396205 MASTLQ96GX5 879 aa8.6□□□□□ -1.03
LMO3-205ENST00000396205 NPR1P16066 1061 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 TMC4Q7Z404 712 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 CNBD1Q8NA66 436 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 RTL9Q8NET4 1388 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 NTSR2O95665 410 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 MBIPQ9NS73 344 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 PRAMEF22A3QJZ6 481 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 H0YIN7 160 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 ZNF784Q8NCA9 323 aaPredicted RBP8.59□□□□□ -1.03
LMO3-205ENST00000396205 PLBD2Q8NHP8 589 aa8.59□□□□□ -1.03
LMO3-205ENST00000396205 TTLL6Q8N841 843 aa8.58□□□□□ -1.04
LMO3-205ENST00000396205 CRAMP1Q96RY5 1269 aa8.58□□□□□ -1.04
LMO3-205ENST00000396205 SMIM5Q71RC9 77 aa8.58□□□□□ -1.04
LMO3-205ENST00000396205 WWC1Q8IX03 1113 aa8.58□□□□□ -1.04
LMO3-205ENST00000396205 ISCA1Q9BUE6 129 aa8.58□□□□□ -1.04
LMO3-205ENST00000396205 THSD7BQ9C0I4 1608 aa8.58□□□□□ -1.04
LMO3-205ENST00000396205 UBN2Q6ZU65 1347 aa8.58□□□□□ -1.04
LMO3-205ENST00000396205 PPP1R42Q7Z4L9 355 aa8.58□□□□□ -1.04
LMO3-205ENST00000396205 NPM2Q86SE8 214 aaKnown RBP8.58□□□□□ -1.04
LMO3-205ENST00000396205 ZNF428Q96B54 188 aa8.58□□□□□ -1.04
LMO3-205ENST00000396205 PSMD1Q99460 953 aa8.57□□□□□ -1.04
LMO3-205ENST00000396205 ARAP2Q8WZ64 1704 aa8.57□□□□□ -1.04
LMO3-205ENST00000396205 HSP90B1P14625 803 aaKnown RBP8.57□□□□□ -1.04
LMO3-205ENST00000396205 ALDH1B1P30837 517 aa8.57□□□□□ -1.04
LMO3-205ENST00000396205 LAMB1P07942 1786 aa8.57□□□□□ -1.04
LMO3-205ENST00000396205 ABCC12Q96J65 1359 aa8.57□□□□□ -1.04
LMO3-205ENST00000396205 CDHR2Q9BYE9 1310 aa8.57□□□□□ -1.04
LMO3-205ENST00000396205 APAF1O14727 1248 aa8.56□□□□□ -1.04
LMO3-205ENST00000396205 TCIRG1Q13488 830 aa8.56□□□□□ -1.04
LMO3-205ENST00000396205 C2CD5Q86YS7 1000 aa8.56□□□□□ -1.04
LMO3-205ENST00000396205 THUMPD2Q9BTF0 503 aaKnown RBP8.56□□□□□ -1.04
LMO3-205ENST00000396205 RTFDC1Q9BY42 306 aaPredicted RBP8.56□□□□□ -1.04
LMO3-205ENST00000396205 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
LMO3-205ENST00000396205 A0A0G2JLW4 131 aa8.56□□□□□ -1.04
LMO3-205ENST00000396205 CT47B1P0C2W7 299 aaPredicted RBP8.55□□□□□ -1.04
LMO3-205ENST00000396205 LMNB1P20700 586 aa8.55□□□□□ -1.04
LMO3-205ENST00000396205 NBPF5PQ86XG9 351 aaPredicted RBP8.55□□□□□ -1.04
LMO3-205ENST00000396205 HLFQ16534 295 aa8.55□□□□□ -1.04
LMO3-205ENST00000396205 CCDC30Q5VVM6 783 aa8.55□□□□□ -1.04
LMO3-205ENST00000396205 DUSP27Q5VZP5 1158 aa8.55□□□□□ -1.04
LMO3-205ENST00000396205 RTKN2Q8IZC4 609 aa8.55□□□□□ -1.04
LMO3-205ENST00000396205 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
LMO3-205ENST00000396205 CCDC146Q8IYE0 955 aa8.55□□□□□ -1.04
LMO3-205ENST00000396205 BRPF1P55201 1214 aaPredicted RBP8.54□□□□□ -1.04
LMO3-205ENST00000396205 SF3B3Q15393 1217 aaKnown RBP8.54□□□□□ -1.04
LMO3-205ENST00000396205 HDGFL1Q5TGJ6 251 aa8.54□□□□□ -1.04
LMO3-205ENST00000396205 NLRP10Q86W26 655 aa8.54□□□□□ -1.04
LMO3-205ENST00000396205 TTLL7Q6ZT98 887 aa8.54□□□□□ -1.04
LMO3-205ENST00000396205 L3MBTL3Q96JM7 780 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms