RNA–Protein interactions for RNA: ENST00000396175.5

TRAK1-203, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-203ENST00000396175 ZNF213O14771 459 aa16.79■□□□□ 0.28
TRAK1-203ENST00000396175 EZRP15311 586 aaKnown RBP16.79■□□□□ 0.28
TRAK1-203ENST00000396175 KANK3Q6NY19 840 aa16.79■□□□□ 0.28
TRAK1-203ENST00000396175 INTS4Q96HW7 963 aaKnown RBP16.79■□□□□ 0.28
TRAK1-203ENST00000396175 SEPT11Q9NVA2 429 aaKnown RBP16.79■□□□□ 0.28
TRAK1-203ENST00000396175 KIAA0586Q9BVV6 1533 aa16.79■□□□□ 0.28
TRAK1-203ENST00000396175 ANKRD62A6NC57 917 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 FGFR1OPO95684 399 aaKnown RBP16.78■□□□□ 0.28
TRAK1-203ENST00000396175 TERF1P54274 439 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 LRP2BPQ9P2M1 347 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 TSHZ3Q63HK5 1081 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRAK1-203ENST00000396175 ORC3Q9UBD5 711 aaPredicted RBP16.78■□□□□ 0.28
TRAK1-203ENST00000396175 IFFO1Q0D2I5 559 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 PPP1R42Q7Z4L9 355 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 NME9Q86XW9 330 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 OGFRQ9NZT2 677 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 DBF4Q9UBU7 674 aaPredicted RBP16.78■□□□□ 0.28
TRAK1-203ENST00000396175 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
TRAK1-203ENST00000396175 UBASH3AP57075 661 aa16.77■□□□□ 0.28
TRAK1-203ENST00000396175 VPS36Q86VN1 386 aa16.77■□□□□ 0.28
TRAK1-203ENST00000396175 DHX37Q8IY37 1157 aaKnown RBP16.77■□□□□ 0.28
TRAK1-203ENST00000396175 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.28
TRAK1-203ENST00000396175 NAPBQ9H115 298 aa16.77■□□□□ 0.28
TRAK1-203ENST00000396175 ZSWIM4Q9H7M6 989 aa16.77■□□□□ 0.28
TRAK1-203ENST00000396175 TYRO3Q06418 890 aa16.77■□□□□ 0.28
TRAK1-203ENST00000396175 EHBP1Q8NDI1 1231 aa16.77■□□□□ 0.28
TRAK1-203ENST00000396175 ALS2CR12Q96Q35 445 aa16.77■□□□□ 0.28
TRAK1-203ENST00000396175 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.28
TRAK1-203ENST00000396175 ARHGEF11O15085 1522 aa16.77■□□□□ 0.27
TRAK1-203ENST00000396175 FBXO3Q9UK99 471 aa16.77■□□□□ 0.27
TRAK1-203ENST00000396175 ASXL1Q8IXJ9 1541 aa16.76■□□□□ 0.27
TRAK1-203ENST00000396175 GBP2P32456 591 aaPredicted RBP16.76■□□□□ 0.27
TRAK1-203ENST00000396175 SSRP1Q08945 709 aaKnown RBP16.76■□□□□ 0.27
TRAK1-203ENST00000396175 NECAB1Q8N987 351 aa16.76■□□□□ 0.27
TRAK1-203ENST00000396175 RHPN1Q8TCX5 695 aa16.76■□□□□ 0.27
TRAK1-203ENST00000396175 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
TRAK1-203ENST00000396175 GOLGA8AA7E2F4 631 aa16.76■□□□□ 0.27
TRAK1-203ENST00000396175 DNM1Q05193 864 aaKnown RBP16.76■□□□□ 0.27
TRAK1-203ENST00000396175 METTL24Q5JXM2 366 aa16.76■□□□□ 0.27
TRAK1-203ENST00000396175 DNAJC25Q9H1X3 360 aa16.76■□□□□ 0.27
TRAK1-203ENST00000396175 TSG101Q99816 390 aa16.76■□□□□ 0.27
TRAK1-203ENST00000396175 IFT140Q96RY7 1462 aa16.75■□□□□ 0.27
TRAK1-203ENST00000396175 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
TRAK1-203ENST00000396175 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
TRAK1-203ENST00000396175 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
TRAK1-203ENST00000396175 RLBP1P12271 317 aa16.75■□□□□ 0.27
TRAK1-203ENST00000396175 MNAT1P51948 309 aa16.75■□□□□ 0.27
TRAK1-203ENST00000396175 MEIS3Q99687 375 aa16.75■□□□□ 0.27
TRAK1-203ENST00000396175 MRPS27Q92552 414 aaKnown RBP16.75■□□□□ 0.27
TRAK1-203ENST00000396175 PPP1R12BO60237 982 aaPredicted RBP16.75■□□□□ 0.27
TRAK1-203ENST00000396175 CCDC175P0C221 793 aa16.75■□□□□ 0.27
TRAK1-203ENST00000396175 IARSP41252 1262 aaKnown RBP16.75■□□□□ 0.27
TRAK1-203ENST00000396175 PYM1Q9BRP8 204 aaKnown RBP16.75■□□□□ 0.27
TRAK1-203ENST00000396175 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
TRAK1-203ENST00000396175 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 CTAGE15A4D2H0 777 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 POLR3DP05423 398 aaPredicted RBP16.74■□□□□ 0.27
TRAK1-203ENST00000396175 CTAGE8P0CG41 777 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 SYKP43405 635 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 SMC1AQ14683 1233 aaKnown RBP16.74■□□□□ 0.27
TRAK1-203ENST00000396175 SPECC1Q5M775 1068 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 CTAGE6Q86UF2 777 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 CTAGE4Q8IX94 777 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 GPATCH11Q8N954 259 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
TRAK1-203ENST00000396175 CCDC113Q9H0I3 377 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 POLR3AO14802 1390 aaPredicted RBP16.74■□□□□ 0.27
TRAK1-203ENST00000396175 TUBB4BP68371 445 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 ATP2B2Q01814 1243 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 BBXQ8WY36 941 aaPredicted RBP16.74■□□□□ 0.27
TRAK1-203ENST00000396175 MYD88Q99836 296 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 DCTPP1Q9H773 170 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 CKAP4Q07065 602 aaKnown RBP16.74■□□□□ 0.27
TRAK1-203ENST00000396175 HLTFQ14527 1009 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRAK1-203ENST00000396175 IPO4Q8TEX9 1081 aaKnown RBP16.74■□□□□ 0.27
TRAK1-203ENST00000396175 PIK3R4Q99570 1358 aa16.74■□□□□ 0.27
TRAK1-203ENST00000396175 PTGS1P23219 599 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 TDRD12Q587J7 1177 aaKnown RBP16.73■□□□□ 0.27
TRAK1-203ENST00000396175 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
TRAK1-203ENST00000396175 PIBF1Q8WXW3 757 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 ZBTB40Q9NUA8 1239 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 IBSPP21815 317 aaPredicted RBP16.73■□□□□ 0.27
TRAK1-203ENST00000396175 CCDC178Q5BJE1 867 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 MRPL50Q8N5N7 158 aaKnown RBP16.73■□□□□ 0.27
TRAK1-203ENST00000396175 BRF1Q92994 677 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
TRAK1-203ENST00000396175 MCM6Q14566 821 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 RNF41Q9H4P4 317 aaPredicted RBP16.73■□□□□ 0.27
TRAK1-203ENST00000396175 RNF123Q5XPI4 1314 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 GCOM1H8Y6P7 765 aaPredicted RBP16.73■□□□□ 0.27
TRAK1-203ENST00000396175 MYZAPP0CAP1 466 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 CETN2P41208 172 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 AMOTQ4VCS5 1084 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 AOPEPQ8N6M6 819 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 RBSNQ9H1K0 784 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
TRAK1-203ENST00000396175 KIF20AO95235 890 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms