RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 XAGE3Q8WTP9 111 aa13.03□□□□□ -0.32
THUMPD1-202ENST00000396083 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
THUMPD1-202ENST00000396083 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
THUMPD1-202ENST00000396083 NFIXQ14938 502 aa13.02□□□□□ -0.32
THUMPD1-202ENST00000396083 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.32
THUMPD1-202ENST00000396083 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
THUMPD1-202ENST00000396083 DDR1Q08345 913 aa13.02□□□□□ -0.33
THUMPD1-202ENST00000396083 LAMB4A4D0S4 1761 aa13.01□□□□□ -0.33
THUMPD1-202ENST00000396083 NLGN2Q8NFZ4 835 aa13.01□□□□□ -0.33
THUMPD1-202ENST00000396083 DBF4Q9UBU7 674 aaPredicted RBP13.01□□□□□ -0.33
THUMPD1-202ENST00000396083 IL16Q14005 1332 aa13.01□□□□□ -0.33
THUMPD1-202ENST00000396083 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
THUMPD1-202ENST00000396083 SLC4A2P04920 1241 aa13□□□□□ -0.33
THUMPD1-202ENST00000396083 RTL5Q5HYW3 569 aaPredicted RBP13□□□□□ -0.33
THUMPD1-202ENST00000396083 KIF6Q6ZMV9 814 aa13□□□□□ -0.33
THUMPD1-202ENST00000396083 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
THUMPD1-202ENST00000396083 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
THUMPD1-202ENST00000396083 SLFN5Q08AF3 891 aa13□□□□□ -0.33
THUMPD1-202ENST00000396083 G2E3Q7L622 706 aa13□□□□□ -0.33
THUMPD1-202ENST00000396083 SYT17Q9BSW7 474 aa13□□□□□ -0.33
THUMPD1-202ENST00000396083 NIP7Q9Y221 180 aaKnown RBP eCLIP13□□□□□ -0.33
THUMPD1-202ENST00000396083 A0A087WZG4 1122 aa12.99□□□□□ -0.33
THUMPD1-202ENST00000396083 E9PSI1 815 aa12.99□□□□□ -0.33
THUMPD1-202ENST00000396083 VAMP4O75379 141 aa12.99□□□□□ -0.33
THUMPD1-202ENST00000396083 LRP10Q7Z4F1 713 aa12.99□□□□□ -0.33
THUMPD1-202ENST00000396083 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
THUMPD1-202ENST00000396083 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
THUMPD1-202ENST00000396083 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
THUMPD1-202ENST00000396083 STK31Q9BXU1 1019 aa12.99□□□□□ -0.33
THUMPD1-202ENST00000396083 ATP5J2-PTCD1G3V325 749 aa12.98□□□□□ -0.33
THUMPD1-202ENST00000396083 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
THUMPD1-202ENST00000396083 NUTM1Q86Y26 1132 aa12.98□□□□□ -0.33
THUMPD1-202ENST00000396083 MAP3K15Q6ZN16 1313 aa12.97□□□□□ -0.33
THUMPD1-202ENST00000396083 POLRMTO00411 1230 aaKnown RBP12.97□□□□□ -0.33
THUMPD1-202ENST00000396083 SERPINB2P05120 415 aa12.97□□□□□ -0.33
THUMPD1-202ENST00000396083 HOXB7P09629 217 aa12.97□□□□□ -0.33
THUMPD1-202ENST00000396083 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
THUMPD1-202ENST00000396083 TM4SF1P30408 202 aa12.96□□□□□ -0.33
THUMPD1-202ENST00000396083 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
THUMPD1-202ENST00000396083 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
THUMPD1-202ENST00000396083 A0A0G2JLW4 131 aa12.96□□□□□ -0.33
THUMPD1-202ENST00000396083 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
THUMPD1-202ENST00000396083 NBPF5PQ86XG9 351 aaPredicted RBP12.96□□□□□ -0.33
THUMPD1-202ENST00000396083 JARID2Q92833 1246 aaPredicted RBP12.96□□□□□ -0.33
THUMPD1-202ENST00000396083 ZNF652Q9Y2D9 606 aa12.96□□□□□ -0.33
THUMPD1-202ENST00000396083 FKBP5Q13451 457 aaPredicted RBP12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 SYNE4Q8N205 404 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 CARMIL3Q8ND23 1372 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 NUP98P52948 1817 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 PI4KAP2A4QPH2 592 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 F6X3S4 739 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 CHRNA5P30532 468 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 PI4KAP1Q8N8J0 262 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 ERBB4Q15303 1308 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 UBN2Q6ZU65 1347 aa12.95□□□□□ -0.34
THUMPD1-202ENST00000396083 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
THUMPD1-202ENST00000396083 CNBD1Q8NA66 436 aa12.94□□□□□ -0.34
THUMPD1-202ENST00000396083 FLIIQ13045 1269 aa12.93□□□□□ -0.34
THUMPD1-202ENST00000396083 MYD88Q99836 296 aa12.93□□□□□ -0.34
THUMPD1-202ENST00000396083 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
THUMPD1-202ENST00000396083 LRP5O75197 1615 aa12.93□□□□□ -0.34
THUMPD1-202ENST00000396083 PRR5LQ6MZQ0 368 aa12.93□□□□□ -0.34
THUMPD1-202ENST00000396083 SSH1Q8WYL5 1049 aa12.93□□□□□ -0.34
THUMPD1-202ENST00000396083 AFDNP55196 1824 aaKnown RBP12.93□□□□□ -0.34
THUMPD1-202ENST00000396083 SUSD4Q5VX71 490 aa12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 SLC4A10Q6U841 1118 aa12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 CLEC4GQ6UXB4 293 aa12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 ZBED9Q6R2W3 1325 aa12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 SCN7AQ01118 1682 aa12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 CWF19L2Q2TBE0 894 aaKnown RBP12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 SMC4Q9NTJ3 1288 aa12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 PLBD2Q8NHP8 589 aa12.92□□□□□ -0.34
THUMPD1-202ENST00000396083 DPEP1P16444 411 aa12.91□□□□□ -0.34
THUMPD1-202ENST00000396083 GPR162Q16538 588 aa12.91□□□□□ -0.34
THUMPD1-202ENST00000396083 FAM89AQ96GI7 184 aa12.91□□□□□ -0.34
THUMPD1-202ENST00000396083 N4BP2Q86UW6 1770 aaPredicted RBP12.91□□□□□ -0.34
THUMPD1-202ENST00000396083 BCORQ6W2J9 1755 aa12.91□□□□□ -0.34
THUMPD1-202ENST00000396083 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
THUMPD1-202ENST00000396083 TCIRG1Q13488 830 aa12.9□□□□□ -0.34
THUMPD1-202ENST00000396083 TPTE2Q6XPS3 522 aa12.9□□□□□ -0.34
THUMPD1-202ENST00000396083 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
THUMPD1-202ENST00000396083 TRMT112Q9UI30 125 aaKnown RBP12.9□□□□□ -0.34
THUMPD1-202ENST00000396083 BCS1LQ9Y276 419 aa12.9□□□□□ -0.34
THUMPD1-202ENST00000396083 BCAR3O75815 825 aa12.9□□□□□ -0.35
THUMPD1-202ENST00000396083 DDX58O95786 925 aaKnown RBP12.9□□□□□ -0.35
THUMPD1-202ENST00000396083 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.35
THUMPD1-202ENST00000396083 FRAT1Q92837 279 aaPredicted RBP12.9□□□□□ -0.35
THUMPD1-202ENST00000396083 ZNF622Q969S3 477 aaKnown RBP eCLIP12.9□□□□□ -0.35
THUMPD1-202ENST00000396083 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.35
THUMPD1-202ENST00000396083 NLRP10Q86W26 655 aa12.89□□□□□ -0.35
THUMPD1-202ENST00000396083 ZNF34Q8IZ26 560 aa12.89□□□□□ -0.35
THUMPD1-202ENST00000396083 ST5P78524 1137 aa12.89□□□□□ -0.35
THUMPD1-202ENST00000396083 CD2APQ9Y5K6 639 aa12.89□□□□□ -0.35
THUMPD1-202ENST00000396083 ADCY9O60503 1353 aa12.89□□□□□ -0.35
THUMPD1-202ENST00000396083 ABCC12Q96J65 1359 aa12.89□□□□□ -0.35
THUMPD1-202ENST00000396083 KSR2Q6VAB6 950 aa12.88□□□□□ -0.35
THUMPD1-202ENST00000396083 C2CD5Q86YS7 1000 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms