RNA–Protein interactions for RNA: ENST00000395972.2

RAB5CP1-201, Transcript of RAB5C, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB5CP1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP1-201ENST00000395972 TRIM35Q9UPQ4 493 aa9.6□□□□□ -0.87
RAB5CP1-201ENST00000395972 BOLA1Q9Y3E2 137 aa9.6□□□□□ -0.87
RAB5CP1-201ENST00000395972 NSD2O96028 1365 aa9.6□□□□□ -0.87
RAB5CP1-201ENST00000395972 ZC3H4Q9UPT8 1303 aaKnown RBP9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 PATL2C9JE40 543 aaKnown RBP9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 KCNA3P22001 575 aa9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 HMGB2P26583 209 aaKnown RBP9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 MDM2Q00987 491 aaPredicted RBP9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 AEBP1Q8IUX7 1158 aa9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 WWC1Q8IX03 1113 aa9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 PDCD7Q8N8D1 485 aaKnown RBP9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 SLC17A8Q8NDX2 589 aa9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 CCDC87Q9NVE4 849 aa9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
RAB5CP1-201ENST00000395972 SPATA31E1Q6ZUB1 1445 aa9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 N4BP2Q86UW6 1770 aaPredicted RBP9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 EVI5O60447 810 aa9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 LMNB1P20700 586 aa9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 DIXDC1Q155Q3 683 aa9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 TMCO4Q5TGY1 634 aa9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 NBPF15Q8N660 670 aa9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 BMP2KQ9NSY1 1161 aaPredicted RBP9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 ABT1Q9ULW3 272 aaKnown RBP9.58□□□□□ -0.88
RAB5CP1-201ENST00000395972 PASKQ96RG2 1323 aa9.57□□□□□ -0.88
RAB5CP1-201ENST00000395972 KAT6BQ8WYB5 2073 aa9.57□□□□□ -0.88
RAB5CP1-201ENST00000395972 SLIT3O75094 1523 aa9.57□□□□□ -0.88
RAB5CP1-201ENST00000395972 RASSF10A6NK89 507 aa9.57□□□□□ -0.88
RAB5CP1-201ENST00000395972 RETREG2Q8NC44 543 aa9.57□□□□□ -0.88
RAB5CP1-201ENST00000395972 KCNH5Q8NCM2 988 aa9.57□□□□□ -0.88
RAB5CP1-201ENST00000395972 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
RAB5CP1-201ENST00000395972 ITSN1Q15811 1721 aa9.56□□□□□ -0.88
RAB5CP1-201ENST00000395972 SSFA2P28290 1259 aa9.56□□□□□ -0.88
RAB5CP1-201ENST00000395972 EPAS1Q99814 870 aa9.56□□□□□ -0.88
RAB5CP1-201ENST00000395972 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
RAB5CP1-201ENST00000395972 LY75O60449 1722 aa9.56□□□□□ -0.88
RAB5CP1-201ENST00000395972 CLK2P49760 499 aaKnown RBP9.55□□□□□ -0.88
RAB5CP1-201ENST00000395972 FXR1P51114 621 aaKnown RBP eCLIP9.55□□□□□ -0.88
RAB5CP1-201ENST00000395972 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
RAB5CP1-201ENST00000395972 PROCA1Q8NCQ7 364 aaPredicted RBP9.55□□□□□ -0.88
RAB5CP1-201ENST00000395972 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
RAB5CP1-201ENST00000395972 GPR101Q96P66 508 aaPredicted RBP9.54□□□□□ -0.88
RAB5CP1-201ENST00000395972 PARP3Q9Y6F1 533 aa9.54□□□□□ -0.88
RAB5CP1-201ENST00000395972 NSD3Q9BZ95 1437 aa9.54□□□□□ -0.88
RAB5CP1-201ENST00000395972 KIAA1551Q9HCM1 1747 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 PALLDQ8WX93 1383 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 POTEMA6NI47 508 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 OATP04181 439 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 CHRNA5P30532 468 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 TMF1P82094 1093 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 MAMSTRQ6ZN01 415 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 LDHDQ86WU2 507 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 NLGN1Q8N2Q7 840 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 CAPNS2Q96L46 248 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 OCEL1Q9H607 264 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
RAB5CP1-201ENST00000395972 C5P01031 1676 aa9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 QRICH2Q9H0J4 1663 aa9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 VIRMAQ69YN4 1812 aaKnown RBP9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 ITGBL1O95965 494 aaPredicted RBP9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 ECE1P42892 770 aa9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 IER5LQ5T953 404 aa9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 RGS22Q8NE09 1264 aa9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 ANKRD24Q8TF21 1146 aa9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 PRM3Q9NNZ6 103 aa9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 PITPNM2Q9BZ72 1349 aa9.52□□□□□ -0.89
RAB5CP1-201ENST00000395972 KDM6AO15550 1401 aaPredicted RBP9.51□□□□□ -0.89
RAB5CP1-201ENST00000395972 RGPD5Q99666 1765 aa9.51□□□□□ -0.89
RAB5CP1-201ENST00000395972 MAP3K7O43318 606 aa9.51□□□□□ -0.89
RAB5CP1-201ENST00000395972 RFC5P40937 340 aa9.51□□□□□ -0.89
RAB5CP1-201ENST00000395972 SRPK2P78362 688 aaKnown RBP9.51□□□□□ -0.89
RAB5CP1-201ENST00000395972 EAPPQ56P03 285 aaPredicted RBP9.51□□□□□ -0.89
RAB5CP1-201ENST00000395972 CYP4F22Q6NT55 531 aa9.51□□□□□ -0.89
RAB5CP1-201ENST00000395972 L3MBTL3Q96JM7 780 aaPredicted RBP9.51□□□□□ -0.89
RAB5CP1-201ENST00000395972 AOC2O75106 756 aa9.5□□□□□ -0.89
RAB5CP1-201ENST00000395972 SEC24BO95487 1268 aa9.5□□□□□ -0.89
RAB5CP1-201ENST00000395972 IRX5P78411 483 aaPredicted RBP9.5□□□□□ -0.89
RAB5CP1-201ENST00000395972 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
RAB5CP1-201ENST00000395972 MPRIPQ6WCQ1 1025 aa9.5□□□□□ -0.89
RAB5CP1-201ENST00000395972 PHOX2BQ99453 314 aa9.5□□□□□ -0.89
RAB5CP1-201ENST00000395972 SCUBE2Q9NQ36 999 aa9.5□□□□□ -0.89
RAB5CP1-201ENST00000395972 C4BP0C0L5 1744 aa9.5□□□□□ -0.89
RAB5CP1-201ENST00000395972 DOT1LQ8TEK3 1739 aa9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 CA12O43570 354 aa9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 DDNO94850 711 aaPredicted RBP9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 METTL3Q86U44 580 aaKnown RBP9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 LINC00116Q8NCU8 138 aa9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 ZCRB1Q8TBF4 217 aaKnown RBP9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 PTCD2Q8WV60 388 aaKnown RBP9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 CDHR5Q9HBB8 845 aa9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 ADGRB1O14514 1584 aa9.49□□□□□ -0.89
RAB5CP1-201ENST00000395972 IQCA1LA6NCM1 817 aa9.48□□□□□ -0.89
RAB5CP1-201ENST00000395972 MFAP1P55081 439 aaKnown RBP9.48□□□□□ -0.89
RAB5CP1-201ENST00000395972 ERFEQ4G0M1 354 aa9.48□□□□□ -0.89
RAB5CP1-201ENST00000395972 TRAPPC3LQ5T215 181 aa9.48□□□□□ -0.89
RAB5CP1-201ENST00000395972 LTV1Q96GA3 475 aaPredicted RBP9.48□□□□□ -0.89
RAB5CP1-201ENST00000395972 FAM163AQ96GL9 167 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms