RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 METTL22Q9BUU2 404 aaPredicted RBP19.1■□□□□ 0.65
PTPN20-206ENST00000395722 RGPD3A6NKT7 1758 aaPredicted RBP19.1■□□□□ 0.65
PTPN20-206ENST00000395722 RGPD4Q7Z3J3 1758 aa19.1■□□□□ 0.65
PTPN20-206ENST00000395722 RIC3Q7Z5B4 369 aa19.1■□□□□ 0.65
PTPN20-206ENST00000395722 SRCIN1Q9C0H9 1055 aa19.1■□□□□ 0.65
PTPN20-206ENST00000395722 PLSCR1O15162 318 aa19.09■□□□□ 0.65
PTPN20-206ENST00000395722 ALDH1L1O75891 902 aa19.09■□□□□ 0.65
PTPN20-206ENST00000395722 KCNQ4P56696 695 aa19.09■□□□□ 0.65
PTPN20-206ENST00000395722 SLC27A3Q5K4L6 730 aa19.09■□□□□ 0.65
PTPN20-206ENST00000395722 LINS1Q8NG48 757 aa19.08■□□□□ 0.65
PTPN20-206ENST00000395722 C4BP0C0L5 1744 aa19.08■□□□□ 0.64
PTPN20-206ENST00000395722 LRRC4BQ9NT99 713 aa19.08■□□□□ 0.64
PTPN20-206ENST00000395722 IGKV5-2P06315 115 aa19.07■□□□□ 0.64
PTPN20-206ENST00000395722 B4GALNT3Q6L9W6 998 aa19.07■□□□□ 0.64
PTPN20-206ENST00000395722 MEIS3Q99687 375 aa19.07■□□□□ 0.64
PTPN20-206ENST00000395722 PCDHB15Q9Y5E8 787 aa19.07■□□□□ 0.64
PTPN20-206ENST00000395722 MAP3K15Q6ZN16 1313 aa19.06■□□□□ 0.64
PTPN20-206ENST00000395722 CCDC136Q96JN2 1154 aa19.06■□□□□ 0.64
PTPN20-206ENST00000395722 KIF6Q6ZMV9 814 aa19.06■□□□□ 0.64
PTPN20-206ENST00000395722 PROM2Q8N271 834 aa19.06■□□□□ 0.64
PTPN20-206ENST00000395722 USP44Q9H0E7 712 aa19.06■□□□□ 0.64
PTPN20-206ENST00000395722 EP400Q96L91 3159 aa19.06■□□□□ 0.64
PTPN20-206ENST00000395722 NEXNQ0ZGT2 675 aa19.05■□□□□ 0.64
PTPN20-206ENST00000395722 ERVV-1B6SEH8 477 aa19.04■□□□□ 0.64
PTPN20-206ENST00000395722 APBA3O96018 575 aa19.04■□□□□ 0.64
PTPN20-206ENST00000395722 MYD88Q99836 296 aa19.04■□□□□ 0.64
PTPN20-206ENST00000395722 ZBTB3Q9H5J0 574 aa19.04■□□□□ 0.64
PTPN20-206ENST00000395722 COL15A1P39059 1388 aa19.04■□□□□ 0.64
PTPN20-206ENST00000395722 NEURL1BA8MQ27 555 aa19.04■□□□□ 0.64
PTPN20-206ENST00000395722 RPS6KA4O75676 772 aa19.04■□□□□ 0.64
PTPN20-206ENST00000395722 GNAI3P08754 354 aa19.04■□□□□ 0.64
PTPN20-206ENST00000395722 TXNRD1Q16881 649 aa19.04■□□□□ 0.64
PTPN20-206ENST00000395722 ZNF330Q9Y3S2 320 aaPredicted RBP19.04■□□□□ 0.64
PTPN20-206ENST00000395722 UTYO14607 1347 aa19.03■□□□□ 0.64
PTPN20-206ENST00000395722 HMGB2P26583 209 aaKnown RBP19.03■□□□□ 0.64
PTPN20-206ENST00000395722 CWF19L2Q2TBE0 894 aaKnown RBP19.03■□□□□ 0.64
PTPN20-206ENST00000395722 DZIP3Q86Y13 1208 aaKnown RBP19.03■□□□□ 0.64
PTPN20-206ENST00000395722 BCORQ6W2J9 1755 aa19.03■□□□□ 0.64
PTPN20-206ENST00000395722 GIGYF2Q6Y7W6 1299 aaKnown RBP19.02■□□□□ 0.64
PTPN20-206ENST00000395722 AFDNP55196 1824 aaKnown RBP19.02■□□□□ 0.64
PTPN20-206ENST00000395722 ANKRD36CQ5JPF3 1778 aa19.02■□□□□ 0.64
PTPN20-206ENST00000395722 A0A087WZG4 1122 aa19.02■□□□□ 0.64
PTPN20-206ENST00000395722 TRIM28Q13263 835 aaKnown RBP19.02■□□□□ 0.64
PTPN20-206ENST00000395722 ISCA1Q9BUE6 129 aa19.02■□□□□ 0.64
PTPN20-206ENST00000395722 KDM2BQ8NHM5 1336 aa19.02■□□□□ 0.63
PTPN20-206ENST00000395722 NUP98P52948 1817 aa19.01■□□□□ 0.63
PTPN20-206ENST00000395722 RGL2O15211 777 aa19.01■□□□□ 0.63
PTPN20-206ENST00000395722 TCIRG1Q13488 830 aa19.01■□□□□ 0.63
PTPN20-206ENST00000395722 GCKRQ14397 625 aa19.01■□□□□ 0.63
PTPN20-206ENST00000395722 CAMTA2O94983 1202 aa19.01■□□□□ 0.63
PTPN20-206ENST00000395722 NPM2Q86SE8 214 aaKnown RBP19.01■□□□□ 0.63
PTPN20-206ENST00000395722 C1orf115Q9H7X2 142 aa19.01■□□□□ 0.63
PTPN20-206ENST00000395722 TBC1D2BQ9UPU7 963 aa19.01■□□□□ 0.63
PTPN20-206ENST00000395722 UBR3Q6ZT12 1888 aa19■□□□□ 0.63
PTPN20-206ENST00000395722 SCN7AQ01118 1682 aa19■□□□□ 0.63
PTPN20-206ENST00000395722 GNPATO15228 680 aa19■□□□□ 0.63
PTPN20-206ENST00000395722 HDAC1Q13547 482 aaPredicted RBP19■□□□□ 0.63
PTPN20-206ENST00000395722 HLFQ16534 295 aa19■□□□□ 0.63
PTPN20-206ENST00000395722 GRM8O00222 908 aa18.99■□□□□ 0.63
PTPN20-206ENST00000395722 GNAI2P04899 355 aa18.99■□□□□ 0.63
PTPN20-206ENST00000395722 NBPF7P0C2Y1 421 aaPredicted RBP18.99■□□□□ 0.63
PTPN20-206ENST00000395722 HSP90AB3PQ58FF7 597 aa18.99■□□□□ 0.63
PTPN20-206ENST00000395722 ATP5J2-PTCD1G3V325 749 aa18.99■□□□□ 0.63
PTPN20-206ENST00000395722 UBTFL1P0CB47 393 aaPredicted RBP18.99■□□□□ 0.63
PTPN20-206ENST00000395722 CCDC191Q8NCU4 936 aa18.99■□□□□ 0.63
PTPN20-206ENST00000395722 RTCBQ9Y3I0 505 aaKnown RBP18.99■□□□□ 0.63
PTPN20-206ENST00000395722 IGHDP01880 384 aa18.98■□□□□ 0.63
PTPN20-206ENST00000395722 AMIGO3Q86WK7 504 aa18.98■□□□□ 0.63
PTPN20-206ENST00000395722 SIRT2Q8IXJ6 389 aa18.98■□□□□ 0.63
PTPN20-206ENST00000395722 C4AP0C0L4 1744 aa18.98■□□□□ 0.63
PTPN20-206ENST00000395722 CEP85Q6P2H3 762 aa18.97■□□□□ 0.63
PTPN20-206ENST00000395722 RPAP2Q8IXW5 612 aaPredicted RBP18.97■□□□□ 0.63
PTPN20-206ENST00000395722 ANKRD44Q8N8A2 993 aa18.97■□□□□ 0.63
PTPN20-206ENST00000395722 AK7Q96M32 723 aa18.97■□□□□ 0.63
PTPN20-206ENST00000395722 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
PTPN20-206ENST00000395722 ADRA2BP18089 450 aa18.97■□□□□ 0.63
PTPN20-206ENST00000395722 CENPQQ7L2Z9 268 aaPredicted RBP18.97■□□□□ 0.63
PTPN20-206ENST00000395722 ZNF34Q8IZ26 560 aa18.97■□□□□ 0.63
PTPN20-206ENST00000395722 CAMKK2Q96RR4 588 aa18.97■□□□□ 0.63
PTPN20-206ENST00000395722 RWDD1Q9H446 243 aaPredicted RBP18.97■□□□□ 0.63
PTPN20-206ENST00000395722 CWC25Q9NXE8 425 aaPredicted RBP18.97■□□□□ 0.63
PTPN20-206ENST00000395722 CASP7P55210 303 aa18.96■□□□□ 0.63
PTPN20-206ENST00000395722 ARXQ96QS3 562 aa18.96■□□□□ 0.63
PTPN20-206ENST00000395722 NARFQ9UHQ1 456 aa18.96■□□□□ 0.63
PTPN20-206ENST00000395722 LRRFIP2Q9Y608 721 aaKnown RBP18.96■□□□□ 0.63
PTPN20-206ENST00000395722 H7C1W4 665 aa18.95■□□□□ 0.62
PTPN20-206ENST00000395722 CLEC4GQ6UXB4 293 aa18.95■□□□□ 0.62
PTPN20-206ENST00000395722 HDAC5Q9UQL6 1122 aa18.95■□□□□ 0.62
PTPN20-206ENST00000395722 AKT1S1Q96B36 256 aa18.95■□□□□ 0.62
PTPN20-206ENST00000395722 SMIM5Q71RC9 77 aa18.94■□□□□ 0.62
PTPN20-206ENST00000395722 NLRP10Q86W26 655 aa18.94■□□□□ 0.62
PTPN20-206ENST00000395722 ARHGEF1Q92888 912 aaKnown RBP18.94■□□□□ 0.62
PTPN20-206ENST00000395722 SSFA2P28290 1259 aa18.93■□□□□ 0.62
PTPN20-206ENST00000395722 KAZALD1Q96I82 304 aa18.93■□□□□ 0.62
PTPN20-206ENST00000395722 BCL2L12Q9HB09 334 aa18.93■□□□□ 0.62
PTPN20-206ENST00000395722 ZNF652Q9Y2D9 606 aa18.93■□□□□ 0.62
PTPN20-206ENST00000395722 UBN2Q6ZU65 1347 aa18.92■□□□□ 0.62
PTPN20-206ENST00000395722 USP42Q9H9J4 1324 aaKnown RBP18.92■□□□□ 0.62
PTPN20-206ENST00000395722 ATP8B2P98198 1209 aa18.92■□□□□ 0.62
PTPN20-206ENST00000395722 MTX1Q13505 466 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms