RNA–Protein interactions for RNA: ENST00000395495.5

A1CF-207, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5 BASIC

Gene A1CF, Length 9,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-207ENST00000395495 CCDC178Q5BJE1 867 aa6.03□□□□□ -1.44
A1CF-207ENST00000395495 UNC5CLQ8IV45 518 aa6.03□□□□□ -1.44
A1CF-207ENST00000395495 CYP46A1Q9Y6A2 500 aa6.03□□□□□ -1.44
A1CF-207ENST00000395495 USO1O60763 962 aaKnown RBP6.03□□□□□ -1.44
A1CF-207ENST00000395495 IFIT1P09914 478 aaKnown RBP6.03□□□□□ -1.44
A1CF-207ENST00000395495 KRT32Q14532 448 aa6.03□□□□□ -1.44
A1CF-207ENST00000395495 NAP1L3Q99457 506 aaPredicted RBP6.03□□□□□ -1.44
A1CF-207ENST00000395495 HAUS7Q99871 368 aa6.03□□□□□ -1.44
A1CF-207ENST00000395495 PUF60Q9UHX1 559 aaKnown RBP6.03□□□□□ -1.44
A1CF-207ENST00000395495 TRAPPC8Q9Y2L5 1435 aa6.03□□□□□ -1.44
A1CF-207ENST00000395495 EXOC5O00471 708 aa6.03□□□□□ -1.44
A1CF-207ENST00000395495 ZC3H6P61129 1189 aaKnown RBP6.03□□□□□ -1.44
A1CF-207ENST00000395495 RNF187Q5TA31 235 aaPredicted RBP6.03□□□□□ -1.44
A1CF-207ENST00000395495 FAM43AQ8N2R8 423 aa6.03□□□□□ -1.44
A1CF-207ENST00000395495 AMOTL2Q9Y2J4 779 aa6.03□□□□□ -1.44
A1CF-207ENST00000395495 KDM2BQ8NHM5 1336 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 PSMC4P43686 418 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 RPUSD2Q8IZ73 545 aaKnown RBP6.02□□□□□ -1.45
A1CF-207ENST00000395495 DDX54Q8TDD1 881 aaKnown RBP6.02□□□□□ -1.45
A1CF-207ENST00000395495 IMPG2Q9BZV3 1241 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 GOPCQ9HD26 462 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 CCDC192P0DO97 292 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 KIF4BQ2VIQ3 1234 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 RSPH3Q86UC2 560 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 CTCFLQ8NI51 663 aaPredicted RBP6.02□□□□□ -1.45
A1CF-207ENST00000395495 CCT6BQ92526 530 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 NOD1Q9Y239 953 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 ZNF444Q8N0Y2 327 aaPredicted RBP6.02□□□□□ -1.45
A1CF-207ENST00000395495 MYBBP1AQ9BQG0 1328 aaKnown RBP6.02□□□□□ -1.45
A1CF-207ENST00000395495 LMOD1P29536 600 aaPredicted RBP6.02□□□□□ -1.45
A1CF-207ENST00000395495 MAP7Q14244 749 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 CCDC83Q8IWF9 413 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 SPC25Q9HBM1 224 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 PDE4AP27815 886 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 PAFAH1B1P43034 410 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 ERMNQ8TAM6 284 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 URB2Q14146 1524 aaKnown RBP6.02□□□□□ -1.45
A1CF-207ENST00000395495 SYCP3Q8IZU3 236 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 TSPY26PQ9H489 355 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 FOXO3O43524 673 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 WDR63Q8IWG1 891 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 CCDC110Q8TBZ0 833 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 FAM107BQ9H098 131 aa6.02□□□□□ -1.45
A1CF-207ENST00000395495 LRPPRCP42704 1394 aaKnown RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 A0A087WZG4 1122 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 AMPD3Q01432 767 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 SATB1Q01826 763 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 IFI16Q16666 785 aaKnown RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 GOLGA1Q92805 767 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 CCDC102AQ96A19 550 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 AKAP2Q9Y2D5 859 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 GSDMBQ8TAX9 411 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 FBF1Q8TES7 1133 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 FMN1Q68DA7 1419 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 ARID4AP29374 1257 aaPredicted RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 CKAP2LQ8IYA6 745 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 DNAAF4Q8WXU2 420 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 PYM1Q9BRP8 204 aaKnown RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 PFDN4Q9NQP4 134 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 SAMM50Q9Y512 469 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 FAM135AQ9P2D6 1515 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 ATP2A1O14983 1001 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 ZMYM3Q14202 1370 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 CCDC18Q5T9S5 1454 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 MAGI1Q96QZ7 1491 aaPredicted RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 CTCFP49711 727 aaPredicted RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 SMC6Q96SB8 1091 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 PHACTR2O75167 634 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 RBM25P49756 843 aaKnown RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 MPHOSPH9Q99550 1183 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 RNF41Q9H4P4 317 aaPredicted RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 CGNQ9P2M7 1197 aaKnown RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 KIF2AO00139 706 aaPredicted RBP6.01□□□□□ -1.45
A1CF-207ENST00000395495 ZBTB16Q05516 673 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 TMEM106CQ9BVX2 250 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 SRCIN1Q9C0H9 1055 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 TNMDQ9H2S6 317 aa6.01□□□□□ -1.45
A1CF-207ENST00000395495 TOPBP1Q92547 1522 aa6□□□□□ -1.45
A1CF-207ENST00000395495 TBCAO75347 108 aaKnown RBP6□□□□□ -1.45
A1CF-207ENST00000395495 PRPHP41219 470 aa6□□□□□ -1.45
A1CF-207ENST00000395495 KRT85P78386 507 aa6□□□□□ -1.45
A1CF-207ENST00000395495 SPECC1Q5M775 1068 aa6□□□□□ -1.45
A1CF-207ENST00000395495 CCDC77Q9BR77 488 aa6□□□□□ -1.45
A1CF-207ENST00000395495 PODXL2Q9NZ53 605 aa6□□□□□ -1.45
A1CF-207ENST00000395495 SPTY2D1Q68D10 685 aaPredicted RBP6□□□□□ -1.45
A1CF-207ENST00000395495 CCDC194A0A1B0GVG4 234 aa6□□□□□ -1.45
A1CF-207ENST00000395495 ATRIPQ8WXE1 791 aa6□□□□□ -1.45
A1CF-207ENST00000395495 RUNDC1Q96C34 613 aa6□□□□□ -1.45
A1CF-207ENST00000395495 C11orf95C9JLR9 678 aaPredicted RBP6□□□□□ -1.45
A1CF-207ENST00000395495 CRCPO75575 148 aa6□□□□□ -1.45
A1CF-207ENST00000395495 ALDH3A1P30838 453 aa6□□□□□ -1.45
A1CF-207ENST00000395495 CFAP70Q5T0N1 1121 aa6□□□□□ -1.45
A1CF-207ENST00000395495 TBC1D5Q92609 795 aa6□□□□□ -1.45
A1CF-207ENST00000395495 DDX11Q96FC9 970 aa6□□□□□ -1.45
A1CF-207ENST00000395495 CALML4Q96GE6 196 aa6□□□□□ -1.45
A1CF-207ENST00000395495 ACSBG1Q96GR2 724 aa6□□□□□ -1.45
A1CF-207ENST00000395495 XRCC6P12956 609 aaKnown RBP eCLIP6□□□□□ -1.45
A1CF-207ENST00000395495 SLC8A3P57103 927 aa6□□□□□ -1.45
A1CF-207ENST00000395495 ARHGEF6Q15052 776 aa6□□□□□ -1.45
A1CF-207ENST00000395495 TNPO1Q92973 898 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms