RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 CTCFP49711 727 aaPredicted RBP18.28■□□□□ 0.52
CHCHD2-201ENST00000395422 ST5P78524 1137 aa18.28■□□□□ 0.52
CHCHD2-201ENST00000395422 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
CHCHD2-201ENST00000395422 WBP1LQ9NX94 342 aa18.28■□□□□ 0.52
CHCHD2-201ENST00000395422 KCNQ3O43525 872 aa18.27■□□□□ 0.52
CHCHD2-201ENST00000395422 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.52
CHCHD2-201ENST00000395422 LBX1P52954 281 aa18.27■□□□□ 0.52
CHCHD2-201ENST00000395422 SOGA3Q5TF21 947 aa18.27■□□□□ 0.52
CHCHD2-201ENST00000395422 AIDAQ96BJ3 306 aa18.27■□□□□ 0.52
CHCHD2-201ENST00000395422 TEX13AQ9BXU3 409 aaPredicted RBP18.27■□□□□ 0.52
CHCHD2-201ENST00000395422 NPHP1O15259 732 aa18.26■□□□□ 0.51
CHCHD2-201ENST00000395422 TEFQ10587 303 aa18.26■□□□□ 0.51
CHCHD2-201ENST00000395422 EAPPQ56P03 285 aaPredicted RBP18.26■□□□□ 0.51
CHCHD2-201ENST00000395422 ZNF277Q9NRM2 450 aaPredicted RBP18.26■□□□□ 0.51
CHCHD2-201ENST00000395422 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
CHCHD2-201ENST00000395422 CCDC93Q567U6 631 aa18.25■□□□□ 0.51
CHCHD2-201ENST00000395422 DZIP3Q86Y13 1208 aaKnown RBP18.25■□□□□ 0.51
CHCHD2-201ENST00000395422 FMNL2Q96PY5 1086 aa18.25■□□□□ 0.51
CHCHD2-201ENST00000395422 VIRMAQ69YN4 1812 aaKnown RBP18.24■□□□□ 0.51
CHCHD2-201ENST00000395422 PRAMEF22A3QJZ6 481 aa18.24■□□□□ 0.51
CHCHD2-201ENST00000395422 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
CHCHD2-201ENST00000395422 FKBP4Q02790 459 aaKnown RBP eCLIP18.24■□□□□ 0.51
CHCHD2-201ENST00000395422 COL3A1P02461 1466 aaPredicted RBP18.23■□□□□ 0.51
CHCHD2-201ENST00000395422 RASSF10A6NK89 507 aa18.23■□□□□ 0.51
CHCHD2-201ENST00000395422 HSPA8P11142 646 aaKnown RBP18.23■□□□□ 0.51
CHCHD2-201ENST00000395422 EPHX2P34913 555 aa18.23■□□□□ 0.51
CHCHD2-201ENST00000395422 MAP1SQ66K74 1059 aaPredicted RBP18.23■□□□□ 0.51
CHCHD2-201ENST00000395422 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
CHCHD2-201ENST00000395422 HACL1Q9UJ83 578 aa18.23■□□□□ 0.51
CHCHD2-201ENST00000395422 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
CHCHD2-201ENST00000395422 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
CHCHD2-201ENST00000395422 CEMIPQ8WUJ3 1361 aa18.22■□□□□ 0.51
CHCHD2-201ENST00000395422 KLRG2A4D1S0 409 aaPredicted RBP18.22■□□□□ 0.51
CHCHD2-201ENST00000395422 NPR1P16066 1061 aa18.22■□□□□ 0.51
CHCHD2-201ENST00000395422 GAS2L2Q8NHY3 880 aa18.22■□□□□ 0.51
CHCHD2-201ENST00000395422 CLEC11AQ9Y240 323 aa18.22■□□□□ 0.51
CHCHD2-201ENST00000395422 ADAMTSL1Q8N6G6 1762 aa18.22■□□□□ 0.51
CHCHD2-201ENST00000395422 PER1O15534 1290 aaPredicted RBP18.21■□□□□ 0.51
CHCHD2-201ENST00000395422 SLC34A2O95436 690 aa18.21■□□□□ 0.51
CHCHD2-201ENST00000395422 CC2D1BQ5T0F9 858 aaKnown RBP18.21■□□□□ 0.51
CHCHD2-201ENST00000395422 CNTROBQ8N137 903 aa18.21■□□□□ 0.51
CHCHD2-201ENST00000395422 CLSPNQ9HAW4 1339 aa18.21■□□□□ 0.51
CHCHD2-201ENST00000395422 FZD9O00144 591 aa18.2■□□□□ 0.5
CHCHD2-201ENST00000395422 U2SURPO15042 1029 aaKnown RBP18.2■□□□□ 0.5
CHCHD2-201ENST00000395422 DEFB115Q30KQ5 88 aa18.2■□□□□ 0.5
CHCHD2-201ENST00000395422 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
CHCHD2-201ENST00000395422 ABHD8Q96I13 439 aa18.2■□□□□ 0.5
CHCHD2-201ENST00000395422 SCN4AP35499 1836 aa18.2■□□□□ 0.5
CHCHD2-201ENST00000395422 KIF7Q2M1P5 1343 aa18.2■□□□□ 0.5
CHCHD2-201ENST00000395422 ARFGEF2Q9Y6D5 1785 aa18.19■□□□□ 0.5
CHCHD2-201ENST00000395422 BTBD11A6QL63 1104 aa18.19■□□□□ 0.5
CHCHD2-201ENST00000395422 CLEC4GQ6UXB4 293 aa18.19■□□□□ 0.5
CHCHD2-201ENST00000395422 SIPA1L3O60292 1781 aaPredicted RBP18.19■□□□□ 0.5
CHCHD2-201ENST00000395422 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
CHCHD2-201ENST00000395422 WDR33Q9C0J8 1336 aaKnown RBP18.19■□□□□ 0.5
CHCHD2-201ENST00000395422 CACNA1SQ13698 1873 aa18.18■□□□□ 0.5
CHCHD2-201ENST00000395422 SNED1Q8TER0 1413 aa18.18■□□□□ 0.5
CHCHD2-201ENST00000395422 IARSP41252 1262 aaKnown RBP18.18■□□□□ 0.5
CHCHD2-201ENST00000395422 FMR1Q06787 632 aaKnown RBP eCLIP18.18■□□□□ 0.52e-6■□□□□ 8.4
CHCHD2-201ENST00000395422 FAM161AQ3B820 660 aa18.18■□□□□ 0.5
CHCHD2-201ENST00000395422 PHACTR3Q96KR7 559 aa18.18■□□□□ 0.5
CHCHD2-201ENST00000395422 FAM177BA6PVY3 158 aa18.17■□□□□ 0.5
CHCHD2-201ENST00000395422 PNMA8AQ86V59 439 aaPredicted RBP18.17■□□□□ 0.5
CHCHD2-201ENST00000395422 RTKN2Q8IZC4 609 aa18.17■□□□□ 0.5
CHCHD2-201ENST00000395422 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
CHCHD2-201ENST00000395422 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
CHCHD2-201ENST00000395422 NBPF26B4DH59 902 aa18.16■□□□□ 0.5
CHCHD2-201ENST00000395422 NBPF10Q6P3W6 841 aaKnown RBP18.16■□□□□ 0.5
CHCHD2-201ENST00000395422 NBPF15Q8N660 670 aa18.16■□□□□ 0.5
CHCHD2-201ENST00000395422 ABT1Q9ULW3 272 aaKnown RBP18.16■□□□□ 0.5
CHCHD2-201ENST00000395422 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHCHD2-201ENST00000395422 COL4A5P29400 1685 aa18.15■□□□□ 0.5
CHCHD2-201ENST00000395422 MAP2K1Q02750 393 aaPredicted RBP18.15■□□□□ 0.5
CHCHD2-201ENST00000395422 TPTE2Q6XPS3 522 aa18.15■□□□□ 0.5
CHCHD2-201ENST00000395422 SLC51AQ86UW1 340 aa18.15■□□□□ 0.5
CHCHD2-201ENST00000395422 GPC2Q8N158 579 aa18.15■□□□□ 0.5
CHCHD2-201ENST00000395422 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHCHD2-201ENST00000395422 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
CHCHD2-201ENST00000395422 HLFQ16534 295 aa18.14■□□□□ 0.49
CHCHD2-201ENST00000395422 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
CHCHD2-201ENST00000395422 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
CHCHD2-201ENST00000395422 CNGB1Q14028 1251 aaPredicted RBP18.13■□□□□ 0.49
CHCHD2-201ENST00000395422 RSPH6AQ9H0K4 717 aa18.13■□□□□ 0.49
CHCHD2-201ENST00000395422 SCNN1DP51172 638 aa18.12■□□□□ 0.49
CHCHD2-201ENST00000395422 PSMD1Q99460 953 aa18.12■□□□□ 0.49
CHCHD2-201ENST00000395422 GJA3Q9Y6H8 435 aa18.12■□□□□ 0.49
CHCHD2-201ENST00000395422 ABCC12Q96J65 1359 aa18.12■□□□□ 0.49
CHCHD2-201ENST00000395422 LTBP1Q14766 1721 aa18.12■□□□□ 0.49
CHCHD2-201ENST00000395422 ALDH1B1P30837 517 aa18.11■□□□□ 0.49
CHCHD2-201ENST00000395422 EPS15P42566 896 aa18.11■□□□□ 0.49
CHCHD2-201ENST00000395422 CRY2Q49AN0 593 aa18.11■□□□□ 0.49
CHCHD2-201ENST00000395422 CYP4F22Q6NT55 531 aa18.11■□□□□ 0.49
CHCHD2-201ENST00000395422 MCM10Q7L590 875 aa18.11■□□□□ 0.49
CHCHD2-201ENST00000395422 CAPNS2Q96L46 248 aa18.11■□□□□ 0.49
CHCHD2-201ENST00000395422 TRAF5O00463 557 aa18.1■□□□□ 0.49
CHCHD2-201ENST00000395422 RGL2O15211 777 aa18.1■□□□□ 0.49
CHCHD2-201ENST00000395422 CST9Q5W186 159 aa18.1■□□□□ 0.49
CHCHD2-201ENST00000395422 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
CHCHD2-201ENST00000395422 JDP2Q8WYK2 163 aa18.1■□□□□ 0.49
CHCHD2-201ENST00000395422 GRM1Q13255 1194 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms