RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 HYPKQ9NX55 129 aa24.25■■□□□ 1.47
LMNB1-202ENST00000395354 C4BP0C0L5 1744 aa24.24■■□□□ 1.47
LMNB1-202ENST00000395354 GNPATO15228 680 aa24.24■■□□□ 1.47
LMNB1-202ENST00000395354 RPS6KA4O75676 772 aa24.23■■□□□ 1.47
LMNB1-202ENST00000395354 IL6STP40189 918 aaPredicted RBP24.23■■□□□ 1.47
LMNB1-202ENST00000395354 ZNF330Q9Y3S2 320 aaPredicted RBP24.23■■□□□ 1.47
LMNB1-202ENST00000395354 CCT4P50991 539 aaKnown RBP24.22■■□□□ 1.47
LMNB1-202ENST00000395354 FLIIQ13045 1269 aa24.22■■□□□ 1.47
LMNB1-202ENST00000395354 G2E3Q7L622 706 aa24.22■■□□□ 1.47
LMNB1-202ENST00000395354 AKT1S1Q96B36 256 aa24.22■■□□□ 1.47
LMNB1-202ENST00000395354 RREB1Q92766 1687 aa24.22■■□□□ 1.47
LMNB1-202ENST00000395354 EIF5P55010 431 aaKnown RBP24.21■■□□□ 1.47
LMNB1-202ENST00000395354 LRP10Q7Z4F1 713 aa24.21■■□□□ 1.47
LMNB1-202ENST00000395354 NPM2Q86SE8 214 aaKnown RBP24.21■■□□□ 1.47
LMNB1-202ENST00000395354 RTCBQ9Y3I0 505 aaKnown RBP24.21■■□□□ 1.47
LMNB1-202ENST00000395354 ZNF827Q17R98 1081 aa24.2■■□□□ 1.47
LMNB1-202ENST00000395354 SMC5Q8IY18 1101 aa24.2■■□□□ 1.47
LMNB1-202ENST00000395354 PHAXQ9H814 394 aaKnown RBP24.2■■□□□ 1.47
LMNB1-202ENST00000395354 TFCP2L1Q9NZI6 479 aa24.2■■□□□ 1.46
LMNB1-202ENST00000395354 PXDNLA1KZ92 1463 aa24.19■■□□□ 1.46
LMNB1-202ENST00000395354 PDE4AP27815 886 aa24.19■■□□□ 1.46
LMNB1-202ENST00000395354 AIMP1Q12904 312 aaKnown RBP24.19■■□□□ 1.46
LMNB1-202ENST00000395354 SMIM5Q71RC9 77 aa24.19■■□□□ 1.46
LMNB1-202ENST00000395354 COPS6Q7L5N1 327 aa24.19■■□□□ 1.46
LMNB1-202ENST00000395354 SKAP1Q86WV1 359 aa24.19■■□□□ 1.46
LMNB1-202ENST00000395354 STK32BQ9NY57 414 aa24.19■■□□□ 1.46
LMNB1-202ENST00000395354 XAGE3Q8WTP9 111 aa24.18■■□□□ 1.46
LMNB1-202ENST00000395354 BACH2Q9BYV9 841 aa24.18■■□□□ 1.46
LMNB1-202ENST00000395354 ANO8Q9HCE9 1232 aaPredicted RBP24.18■■□□□ 1.46
LMNB1-202ENST00000395354 PDZRN3Q9UPQ7 1066 aa24.18■■□□□ 1.46
LMNB1-202ENST00000395354 NUP188Q5SRE5 1749 aa24.18■■□□□ 1.46
LMNB1-202ENST00000395354 SLC15A2Q16348 729 aa24.17■■□□□ 1.46
LMNB1-202ENST00000395354 AMIGO3Q86WK7 504 aa24.17■■□□□ 1.46
LMNB1-202ENST00000395354 ARXQ96QS3 562 aa24.17■■□□□ 1.46
LMNB1-202ENST00000395354 PHF14O94880 888 aa24.16■■□□□ 1.46
LMNB1-202ENST00000395354 FKBP5Q13451 457 aaPredicted RBP24.16■■□□□ 1.46
LMNB1-202ENST00000395354 TRAPPC3LQ5T215 181 aa24.16■■□□□ 1.46
LMNB1-202ENST00000395354 A0A087WZG4 1122 aa24.16■■□□□ 1.46
LMNB1-202ENST00000395354 RGS3P49796 1198 aa24.16■■□□□ 1.46
LMNB1-202ENST00000395354 COL15A1P39059 1388 aa24.15■■□□□ 1.46
LMNB1-202ENST00000395354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.15■■□□□ 1.46
LMNB1-202ENST00000395354 SSFA2P28290 1259 aa24.15■■□□□ 1.46
LMNB1-202ENST00000395354 TTLL7Q6ZT98 887 aa24.15■■□□□ 1.46
LMNB1-202ENST00000395354 GCC1Q96CN9 775 aa24.15■■□□□ 1.46
LMNB1-202ENST00000395354 TBC1D2BQ9UPU7 963 aa24.15■■□□□ 1.46
LMNB1-202ENST00000395354 N4BP2Q86UW6 1770 aaPredicted RBP24.14■■□□□ 1.46
LMNB1-202ENST00000395354 ADRA2BP18089 450 aa24.14■■□□□ 1.45
LMNB1-202ENST00000395354 ARHGEF1Q92888 912 aaKnown RBP24.14■■□□□ 1.45
LMNB1-202ENST00000395354 UBR3Q6ZT12 1888 aa24.13■■□□□ 1.45
LMNB1-202ENST00000395354 DZIP3Q86Y13 1208 aaKnown RBP24.13■■□□□ 1.45
LMNB1-202ENST00000395354 RPAP2Q8IXW5 612 aaPredicted RBP24.13■■□□□ 1.45
LMNB1-202ENST00000395354 KIF6Q6ZMV9 814 aa24.12■■□□□ 1.45
LMNB1-202ENST00000395354 ANKRD13DQ6ZTN6 518 aa24.12■■□□□ 1.45
LMNB1-202ENST00000395354 FLAD1Q8NFF5 587 aa24.12■■□□□ 1.45
LMNB1-202ENST00000395354 F6X3S4 739 aa24.12■■□□□ 1.45
LMNB1-202ENST00000395354 DDX58O95786 925 aaKnown RBP24.12■■□□□ 1.45
LMNB1-202ENST00000395354 RFC4P35249 363 aa24.12■■□□□ 1.45
LMNB1-202ENST00000395354 FAM161AQ3B820 660 aa24.12■■□□□ 1.45
LMNB1-202ENST00000395354 SOCS7O14512 581 aa24.11■■□□□ 1.45
LMNB1-202ENST00000395354 SLC4A10Q6U841 1118 aa24.11■■□□□ 1.45
LMNB1-202ENST00000395354 KSR2Q6VAB6 950 aa24.1■■□□□ 1.45
LMNB1-202ENST00000395354 COL23A1Q86Y22 540 aaPredicted RBP24.1■■□□□ 1.45
LMNB1-202ENST00000395354 ANKRD44Q8N8A2 993 aa24.1■■□□□ 1.45
LMNB1-202ENST00000395354 PLBD2Q8NHP8 589 aa24.1■■□□□ 1.45
LMNB1-202ENST00000395354 C1orf115Q9H7X2 142 aa24.1■■□□□ 1.45
LMNB1-202ENST00000395354 PNPLA7Q6ZV29 1317 aa24.09■■□□□ 1.45
LMNB1-202ENST00000395354 PI4KAP2A4QPH2 592 aa24.09■■□□□ 1.45
LMNB1-202ENST00000395354 NUCB1Q02818 461 aa24.09■■□□□ 1.45
LMNB1-202ENST00000395354 RIC3Q7Z5B4 369 aa24.09■■□□□ 1.45
LMNB1-202ENST00000395354 SIRT2Q8IXJ6 389 aa24.09■■□□□ 1.45
LMNB1-202ENST00000395354 PI4KAP1Q8N8J0 262 aa24.09■■□□□ 1.45
LMNB1-202ENST00000395354 ZBTB3Q9H5J0 574 aa24.09■■□□□ 1.45
LMNB1-202ENST00000395354 NARFQ9UHQ1 456 aa24.09■■□□□ 1.45
LMNB1-202ENST00000395354 MAP3K15Q6ZN16 1313 aa24.09■■□□□ 1.45
LMNB1-202ENST00000395354 MSH5O43196 834 aa24.08■■□□□ 1.45
LMNB1-202ENST00000395354 ZPR1O75312 459 aa24.08■■□□□ 1.45
LMNB1-202ENST00000395354 GNAI3P08754 354 aa24.08■■□□□ 1.45
LMNB1-202ENST00000395354 MEIS3Q99687 375 aa24.08■■□□□ 1.45
LMNB1-202ENST00000395354 ATP10DQ9P241 1426 aa24.08■■□□□ 1.45
LMNB1-202ENST00000395354 ERVV-1B6SEH8 477 aa24.08■■□□□ 1.44
LMNB1-202ENST00000395354 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
LMNB1-202ENST00000395354 SRP68Q9UHB9 627 aaKnown RBP24.07■■□□□ 1.44
LMNB1-202ENST00000395354 MAP3K2Q9Y2U5 619 aa24.07■■□□□ 1.44
LMNB1-202ENST00000395354 USPL1Q5W0Q7 1092 aa24.06■■□□□ 1.44
LMNB1-202ENST00000395354 TUBGCP6Q96RT7 1819 aa24.06■■□□□ 1.44
LMNB1-202ENST00000395354 USP42Q9H9J4 1324 aaKnown RBP24.05■■□□□ 1.44
LMNB1-202ENST00000395354 HLFQ16534 295 aa24.05■■□□□ 1.44
LMNB1-202ENST00000395354 CEP85Q6P2H3 762 aa24.05■■□□□ 1.44
LMNB1-202ENST00000395354 ADCY9O60503 1353 aa24.05■■□□□ 1.44
LMNB1-202ENST00000395354 DNAAF4Q8WXU2 420 aa24.04■■□□□ 1.44
LMNB1-202ENST00000395354 GNAI2P04899 355 aa24.03■■□□□ 1.44
LMNB1-202ENST00000395354 R3HDM1Q15032 1099 aaKnown RBP24.03■■□□□ 1.44
LMNB1-202ENST00000395354 C8orf34Q49A92 452 aa24.03■■□□□ 1.44
LMNB1-202ENST00000395354 GIGYF2Q6Y7W6 1299 aaKnown RBP24.03■■□□□ 1.44
LMNB1-202ENST00000395354 CHD1LQ86WJ1 897 aa24.03■■□□□ 1.44
LMNB1-202ENST00000395354 DCTPP1Q9H773 170 aa24.03■■□□□ 1.44
LMNB1-202ENST00000395354 CLEC4GQ6UXB4 293 aa24.03■■□□□ 1.44
LMNB1-202ENST00000395354 METTL22Q9BUU2 404 aaPredicted RBP24.03■■□□□ 1.44
LMNB1-202ENST00000395354 SRCIN1Q9C0H9 1055 aa24.03■■□□□ 1.44
LMNB1-202ENST00000395354 BCL2L12Q9HB09 334 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms