RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 SLC4A8Q2Y0W8 1093 aa6.98□□□□□ -1.29
MATR3-230ENST00000394800 RTF1Q92541 710 aaKnown RBP6.98□□□□□ -1.29
MATR3-230ENST00000394800 MEIS3Q99687 375 aa6.98□□□□□ -1.29
MATR3-230ENST00000394800 RGL2O15211 777 aa6.98□□□□□ -1.29
MATR3-230ENST00000394800 CCP110O43303 1012 aa6.98□□□□□ -1.29
MATR3-230ENST00000394800 KIAA0232Q92628 1395 aa6.98□□□□□ -1.29
MATR3-230ENST00000394800 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.98□□□□□ -1.293e-7■■■■■ 32.2
MATR3-230ENST00000394800 NUCB1Q02818 461 aa6.98□□□□□ -1.29
MATR3-230ENST00000394800 ARHGEF25Q86VW2 580 aa6.98□□□□□ -1.29
MATR3-230ENST00000394800 GNAT3A8MTJ3 354 aa6.97□□□□□ -1.29
MATR3-230ENST00000394800 INTS3Q68E01 1043 aaKnown RBP6.97□□□□□ -1.29
MATR3-230ENST00000394800 GAS2L2Q8NHY3 880 aa6.97□□□□□ -1.29
MATR3-230ENST00000394800 MPHOSPH6Q99547 160 aaKnown RBP6.97□□□□□ -1.29
MATR3-230ENST00000394800 ATP10DQ9P241 1426 aa6.97□□□□□ -1.29
MATR3-230ENST00000394800 ZRANB2O95218 330 aaKnown RBP eCLIP6.97□□□□□ -1.294e-7■■■□□ 14.6
MATR3-230ENST00000394800 MYCNP04198 464 aaPredicted RBP6.97□□□□□ -1.29
MATR3-230ENST00000394800 KCNA1Q09470 495 aa6.97□□□□□ -1.29
MATR3-230ENST00000394800 FOXD4Q12950 439 aaPredicted RBP6.97□□□□□ -1.29
MATR3-230ENST00000394800 API5Q9BZZ5 524 aaKnown RBP6.97□□□□□ -1.29
MATR3-230ENST00000394800 KIF24Q5T7B8 1368 aa6.97□□□□□ -1.29
MATR3-230ENST00000394800 KCNQ3O43525 872 aa6.97□□□□□ -1.29
MATR3-230ENST00000394800 ANKRD45Q5TZF3 282 aa6.97□□□□□ -1.29
MATR3-230ENST00000394800 ZC3H6P61129 1189 aaKnown RBP6.97□□□□□ -1.29
MATR3-230ENST00000394800 CHD1LQ86WJ1 897 aa6.97□□□□□ -1.29
MATR3-230ENST00000394800 C1orf167Q5SNV9 1468 aa6.97□□□□□ -1.29
MATR3-230ENST00000394800 GOLGA6L3A6NEY3 463 aa6.96□□□□□ -1.29
MATR3-230ENST00000394800 MAFGO15525 162 aa6.96□□□□□ -1.29
MATR3-230ENST00000394800 LCA5Q86VQ0 697 aa6.96□□□□□ -1.29
MATR3-230ENST00000394800 CC2D1AQ6P1N0 951 aaPredicted RBP6.96□□□□□ -1.29
MATR3-230ENST00000394800 KRT28Q7Z3Y7 464 aa6.96□□□□□ -1.29
MATR3-230ENST00000394800 C19orf44Q9H6X5 657 aa6.96□□□□□ -1.29
MATR3-230ENST00000394800 C16orf71Q8IYS4 520 aaPredicted RBP6.96□□□□□ -1.3
MATR3-230ENST00000394800 GABBR1Q9UBS5 961 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 ZHX1Q9UKY1 873 aaPredicted RBP6.96□□□□□ -1.3
MATR3-230ENST00000394800 TMEM94Q12767 1356 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 LRRC37A3O60309 1634 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 LOC102724159A0A0B4J2E5 919 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 CCDC175P0C221 793 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 PWP2Q15269 919 aaKnown RBP6.96□□□□□ -1.3
MATR3-230ENST00000394800 SLC4A10Q6U841 1118 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 CXorf38Q8TB03 319 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 CABLES1Q8TDN4 633 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 CACNA1FO60840 1977 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 MAP3K5Q99683 1374 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 INF2Q27J81 1249 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 TSR1Q2NL82 804 aaKnown RBP6.96□□□□□ -1.3
MATR3-230ENST00000394800 ATP6V1E2Q96A05 226 aa6.96□□□□□ -1.3
MATR3-230ENST00000394800 RTL1A6NKG5 1358 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 TRPM3Q9HCF6 1732 aaPredicted RBP6.95□□□□□ -1.3
MATR3-230ENST00000394800 PPM1FP49593 454 aaPredicted RBP6.95□□□□□ -1.3
MATR3-230ENST00000394800 OTUD7AQ8TE49 926 aaPredicted RBP6.95□□□□□ -1.3
MATR3-230ENST00000394800 TBC1D32Q96NH3 1257 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 HDAC9Q9UKV0 1011 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 PXDNQ92626 1479 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 SPDYE4A6NLX3 237 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 ANXA1P04083 346 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 ZNF280DQ6N043 979 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 MPRIPQ6WCQ1 1025 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 CEMIPQ8WUJ3 1361 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 TTC36A6NLP5 189 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 TAF7Q15545 349 aaPredicted RBP6.95□□□□□ -1.3
MATR3-230ENST00000394800 KCNH5Q8NCM2 988 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 SPOCK2Q92563 424 aa6.95□□□□□ -1.3
MATR3-230ENST00000394800 PHAXQ9H814 394 aaKnown RBP6.95□□□□□ -1.3
MATR3-230ENST00000394800 IQSEC3Q9UPP2 1182 aaPredicted RBP6.95□□□□□ -1.3
MATR3-230ENST00000394800 H0YHG0 523 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 SARNPP82979 210 aaKnown RBP6.94□□□□□ -1.3
MATR3-230ENST00000394800 CEP85Q6P2H3 762 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 GTF2F1P35269 517 aaKnown RBP eCLIP6.94□□□□□ -1.32e-10■■■□□ 15.1
MATR3-230ENST00000394800 MFSD4BQ5TF39 518 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 ACRBPQ8NEB7 543 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 SWAP70Q9UH65 585 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 PHRF1Q9P1Y6 1649 aaKnown RBP6.94□□□□□ -1.3
MATR3-230ENST00000394800 FLIIQ13045 1269 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 ANKRD44Q8N8A2 993 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 ANKRD24Q8TF21 1146 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 UPF2Q9HAU5 1272 aaKnown RBP6.94□□□□□ -1.3
MATR3-230ENST00000394800 DCTPP1Q9H773 170 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 MST1RQ04912 1400 aa6.94□□□□□ -1.3
MATR3-230ENST00000394800 PTPRCP08575 1304 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 ZNF530Q6P9A1 599 aaPredicted RBP6.93□□□□□ -1.3
MATR3-230ENST00000394800 MED1Q15648 1581 aaPredicted RBP6.93□□□□□ -1.3
MATR3-230ENST00000394800 PRAMEF22A3QJZ6 481 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 LONRF3Q496Y0 759 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 IFNLR1Q8IU57 520 aaPredicted RBP6.93□□□□□ -1.3
MATR3-230ENST00000394800 DDRGK1Q96HY6 314 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 FAM208AQ9UK61 1670 aaKnown RBP6.93□□□□□ -1.3
MATR3-230ENST00000394800 SLIT3O75094 1523 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 TRIM6-TRIM34B2RNG4 842 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 HMMRO75330 724 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 FKBP5Q13451 457 aaPredicted RBP6.93□□□□□ -1.3
MATR3-230ENST00000394800 GCC1Q96CN9 775 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 ERBB3P21860 1342 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 GSPT1P15170 499 aaKnown RBP6.93□□□□□ -1.3
MATR3-230ENST00000394800 PAX3P23760 479 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 TTLL12Q14166 644 aaPredicted RBP6.93□□□□□ -1.3
MATR3-230ENST00000394800 CHRNA2Q15822 529 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 STK25O00506 426 aa6.93□□□□□ -1.3
MATR3-230ENST00000394800 TPM3P06753 285 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms