RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 IL25Q9H293 177 aa12□□□□□ -0.49
PSEN1-204ENST00000394164 ZDHHC9Q9Y397 364 aa12□□□□□ -0.49
PSEN1-204ENST00000394164 NALCNQ8IZF0 1738 aa12□□□□□ -0.49
PSEN1-204ENST00000394164 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
PSEN1-204ENST00000394164 REC8O95072 547 aa12□□□□□ -0.49
PSEN1-204ENST00000394164 NLRP2Q9NX02 1062 aa12□□□□□ -0.49
PSEN1-204ENST00000394164 LETM1O95202 739 aaPredicted RBP12□□□□□ -0.49
PSEN1-204ENST00000394164 PA2G4Q9UQ80 394 aaKnown RBP12□□□□□ -0.49
PSEN1-204ENST00000394164 HTATSF1O43719 755 aaKnown RBP11.99□□□□□ -0.49
PSEN1-204ENST00000394164 MYL6BP14649 208 aa11.99□□□□□ -0.49
PSEN1-204ENST00000394164 CHRNA2Q15822 529 aa11.99□□□□□ -0.49
PSEN1-204ENST00000394164 CLEC17AQ6ZS10 378 aa11.99□□□□□ -0.49
PSEN1-204ENST00000394164 TSPY26PQ9H489 355 aa11.99□□□□□ -0.49
PSEN1-204ENST00000394164 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
PSEN1-204ENST00000394164 KIF20AO95235 890 aa11.99□□□□□ -0.49
PSEN1-204ENST00000394164 DDX54Q8TDD1 881 aaKnown RBP11.99□□□□□ -0.49
PSEN1-204ENST00000394164 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
PSEN1-204ENST00000394164 KRT28Q7Z3Y7 464 aa11.98□□□□□ -0.49
PSEN1-204ENST00000394164 DNAAF4Q8WXU2 420 aa11.98□□□□□ -0.49
PSEN1-204ENST00000394164 C9orf78Q9NZ63 289 aaPredicted RBP11.98□□□□□ -0.49
PSEN1-204ENST00000394164 ST18O60284 1047 aa11.98□□□□□ -0.49
PSEN1-204ENST00000394164 CSB-PGBD3P0DP91 1061 aa11.98□□□□□ -0.49
PSEN1-204ENST00000394164 MAP3K2Q9Y2U5 619 aa11.98□□□□□ -0.49
PSEN1-204ENST00000394164 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
PSEN1-204ENST00000394164 CYP2E1P05181 493 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-204ENST00000394164 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
PSEN1-204ENST00000394164 SIL1Q9H173 461 aa11.97□□□□□ -0.49
PSEN1-204ENST00000394164 CCDC9Q9Y3X0 531 aaKnown RBP11.97□□□□□ -0.49
PSEN1-204ENST00000394164 CHMLP26374 656 aa11.97□□□□□ -0.49
PSEN1-204ENST00000394164 KCNH5Q8NCM2 988 aa11.97□□□□□ -0.49
PSEN1-204ENST00000394164 NWD1Q149M9 1564 aa11.96□□□□□ -0.49
PSEN1-204ENST00000394164 ANKARQ7Z5J8 1434 aa11.96□□□□□ -0.49
PSEN1-204ENST00000394164 GADD45BO75293 160 aaPredicted RBP11.96□□□□□ -0.49
PSEN1-204ENST00000394164 KLHDC4Q8TBB5 520 aa11.96□□□□□ -0.49
PSEN1-204ENST00000394164 RHPN1Q8TCX5 695 aa11.96□□□□□ -0.49
PSEN1-204ENST00000394164 PIBF1Q8WXW3 757 aa11.96□□□□□ -0.49
PSEN1-204ENST00000394164 PRIMPOLQ96LW4 560 aa11.96□□□□□ -0.49
PSEN1-204ENST00000394164 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
PSEN1-204ENST00000394164 RIOK3O14730 519 aaKnown RBP11.96□□□□□ -0.5
PSEN1-204ENST00000394164 RNMTO43148 476 aaKnown RBP11.96□□□□□ -0.5
PSEN1-204ENST00000394164 HMGN5P82970 282 aaKnown RBP11.96□□□□□ -0.5
PSEN1-204ENST00000394164 CWC27Q6UX04 472 aaKnown RBP11.96□□□□□ -0.5
PSEN1-204ENST00000394164 SPC24Q8NBT2 197 aa11.96□□□□□ -0.5
PSEN1-204ENST00000394164 ADCY5O95622 1261 aa11.95□□□□□ -0.5
PSEN1-204ENST00000394164 PDIA4P13667 645 aaKnown RBP11.95□□□□□ -0.5
PSEN1-204ENST00000394164 CPA1P15085 419 aa11.95□□□□□ -0.5
PSEN1-204ENST00000394164 AKAP4Q5JQC9 854 aa11.95□□□□□ -0.5
PSEN1-204ENST00000394164 BEND3Q5T5X7 828 aa11.95□□□□□ -0.5
PSEN1-204ENST00000394164 ARHGEF25Q86VW2 580 aa11.95□□□□□ -0.5
PSEN1-204ENST00000394164 RGPD2P0DJD1 1756 aa11.94□□□□□ -0.5
PSEN1-204ENST00000394164 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
PSEN1-204ENST00000394164 PXDNQ92626 1479 aa11.94□□□□□ -0.5
PSEN1-204ENST00000394164 XRN1Q8IZH2 1706 aaKnown RBP11.94□□□□□ -0.5
PSEN1-204ENST00000394164 KCNJ4P48050 445 aa11.94□□□□□ -0.5
PSEN1-204ENST00000394164 TMX3Q96JJ7 454 aa11.94□□□□□ -0.5
PSEN1-204ENST00000394164 TRERF1Q96PN7 1200 aa11.94□□□□□ -0.5
PSEN1-204ENST00000394164 HCLS1P14317 486 aaPredicted RBP11.93□□□□□ -0.5
PSEN1-204ENST00000394164 NAA30Q147X3 362 aaPredicted RBP11.93□□□□□ -0.5
PSEN1-204ENST00000394164 SSH3Q8TE77 659 aa11.93□□□□□ -0.5
PSEN1-204ENST00000394164 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
PSEN1-204ENST00000394164 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
PSEN1-204ENST00000394164 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.93□□□□□ -0.5
PSEN1-204ENST00000394164 LTN1O94822 1766 aa11.93□□□□□ -0.5
PSEN1-204ENST00000394164 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
PSEN1-204ENST00000394164 SALL3Q9BXA9 1300 aa11.92□□□□□ -0.5
PSEN1-204ENST00000394164 GIGYF1O75420 1035 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-204ENST00000394164 RAPGEF4Q8WZA2 1011 aa11.92□□□□□ -0.5
PSEN1-204ENST00000394164 PYCARDQ9ULZ3 195 aa11.92□□□□□ -0.5
PSEN1-204ENST00000394164 ADCY9O60503 1353 aa11.92□□□□□ -0.5
PSEN1-204ENST00000394164 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
PSEN1-204ENST00000394164 ERICH4A6NGS2 130 aa11.92□□□□□ -0.5
PSEN1-204ENST00000394164 CCDC8Q9H0W5 538 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-204ENST00000394164 HSPA2P54652 639 aa11.92□□□□□ -0.5
PSEN1-204ENST00000394164 CHAF1AQ13111 956 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-204ENST00000394164 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
PSEN1-204ENST00000394164 MCCP23508 829 aa11.91□□□□□ -0.5
PSEN1-204ENST00000394164 MBD3O95983 291 aa11.91□□□□□ -0.5
PSEN1-204ENST00000394164 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
PSEN1-204ENST00000394164 NDUFB9Q9Y6M9 179 aa11.91□□□□□ -0.5
PSEN1-204ENST00000394164 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
PSEN1-204ENST00000394164 ATF3P18847 181 aa11.9□□□□□ -0.5
PSEN1-204ENST00000394164 GTF2F1P35269 517 aaKnown RBP eCLIP11.9□□□□□ -0.5
PSEN1-204ENST00000394164 AACSQ86V21 672 aa11.9□□□□□ -0.5
PSEN1-204ENST00000394164 KIF1BPQ96EK5 621 aa11.9□□□□□ -0.5
PSEN1-204ENST00000394164 ADGRL3Q9HAR2 1447 aa11.9□□□□□ -0.5
PSEN1-204ENST00000394164 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
PSEN1-204ENST00000394164 PI4K2BQ8TCG2 481 aa11.9□□□□□ -0.5
PSEN1-204ENST00000394164 ATP5J2-PTCD1G3V325 749 aa11.89□□□□□ -0.51
PSEN1-204ENST00000394164 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
PSEN1-204ENST00000394164 IFIT2P09913 472 aaKnown RBP11.89□□□□□ -0.51
PSEN1-204ENST00000394164 SUCLG2Q96I99 432 aa11.89□□□□□ -0.51
PSEN1-204ENST00000394164 BICC1Q9H694 974 aaKnown RBP11.89□□□□□ -0.51
PSEN1-204ENST00000394164 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-204ENST00000394164 KSR2Q6VAB6 950 aa11.89□□□□□ -0.51
PSEN1-204ENST00000394164 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
PSEN1-204ENST00000394164 POLA2Q14181 598 aa11.89□□□□□ -0.51
PSEN1-204ENST00000394164 CLASRPQ8N2M8 674 aaKnown RBP11.89□□□□□ -0.51
PSEN1-204ENST00000394164 IPO4Q8TEX9 1081 aaKnown RBP11.89□□□□□ -0.51
PSEN1-204ENST00000394164 XAGE3Q8WTP9 111 aa11.89□□□□□ -0.51
PSEN1-204ENST00000394164 MYD88Q99836 296 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms