RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 ZSCAN22P10073 491 aaPredicted RBP16.78■□□□□ 0.28
GAPVD1-205ENST00000394084 CCDC83Q8IWF9 413 aa16.78■□□□□ 0.28
GAPVD1-205ENST00000394084 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
GAPVD1-205ENST00000394084 N4BP2Q86UW6 1770 aaPredicted RBP16.78■□□□□ 0.28
GAPVD1-205ENST00000394084 STX6O43752 255 aa16.78■□□□□ 0.28
GAPVD1-205ENST00000394084 JAKMIP1Q96N16 626 aaKnown RBP16.78■□□□□ 0.28
GAPVD1-205ENST00000394084 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.28
GAPVD1-205ENST00000394084 PSME1Q06323 249 aa16.77■□□□□ 0.28
GAPVD1-205ENST00000394084 ADCK5Q3MIX3 580 aa16.77■□□□□ 0.28
GAPVD1-205ENST00000394084 ZNF500O60304 480 aaPredicted RBP16.77■□□□□ 0.28
GAPVD1-205ENST00000394084 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.28
GAPVD1-205ENST00000394084 IFIT2P09913 472 aaKnown RBP16.77■□□□□ 0.27
GAPVD1-205ENST00000394084 PHF14O94880 888 aa16.76■□□□□ 0.27
GAPVD1-205ENST00000394084 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
GAPVD1-205ENST00000394084 DBF4Q9UBU7 674 aaPredicted RBP16.76■□□□□ 0.27
GAPVD1-205ENST00000394084 HOXB7P09629 217 aa16.76■□□□□ 0.27
GAPVD1-205ENST00000394084 AKAP4Q5JQC9 854 aa16.76■□□□□ 0.27
GAPVD1-205ENST00000394084 AACSQ86V21 672 aa16.76■□□□□ 0.27
GAPVD1-205ENST00000394084 ECHDC1Q9NTX5 307 aa16.76■□□□□ 0.27
GAPVD1-205ENST00000394084 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.76■□□□□ 0.27
GAPVD1-205ENST00000394084 LTN1O94822 1766 aa16.76■□□□□ 0.27
GAPVD1-205ENST00000394084 AIMP1Q12904 312 aaKnown RBP16.75■□□□□ 0.27
GAPVD1-205ENST00000394084 TTC41PQ6P2S7 1318 aa16.75■□□□□ 0.27
GAPVD1-205ENST00000394084 RBM10P98175 930 aaKnown RBP16.75■□□□□ 0.27
GAPVD1-205ENST00000394084 PLEKHO1Q53GL0 409 aaPredicted RBP16.75■□□□□ 0.27
GAPVD1-205ENST00000394084 PDRG1Q9NUG6 133 aa16.75■□□□□ 0.27
GAPVD1-205ENST00000394084 F13A1P00488 732 aa16.75■□□□□ 0.27
GAPVD1-205ENST00000394084 RUFY2Q8WXA3 655 aa16.75■□□□□ 0.27
GAPVD1-205ENST00000394084 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
GAPVD1-205ENST00000394084 GJB2P29033 226 aa16.74■□□□□ 0.27
GAPVD1-205ENST00000394084 C1orf141Q5JVX7 400 aa16.74■□□□□ 0.27
GAPVD1-205ENST00000394084 USP25Q9UHP3 1055 aa16.74■□□□□ 0.27
GAPVD1-205ENST00000394084 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.74■□□□□ 0.27
GAPVD1-205ENST00000394084 RNMTO43148 476 aaKnown RBP16.74■□□□□ 0.27
GAPVD1-205ENST00000394084 KCNJ4P48050 445 aa16.74■□□□□ 0.27
GAPVD1-205ENST00000394084 CCDC8Q9H0W5 538 aaPredicted RBP16.74■□□□□ 0.27
GAPVD1-205ENST00000394084 HCLS1P14317 486 aaPredicted RBP16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 CCDC183Q5T5S1 534 aa16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 NECAB1Q8N987 351 aa16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 KSR2Q6VAB6 950 aa16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 GPATCH3Q96I76 525 aa16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 ZNF830Q96NB3 372 aaPredicted RBP16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 SIL1Q9H173 461 aa16.73■□□□□ 0.27
GAPVD1-205ENST00000394084 RGPD2P0DJD1 1756 aa16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 GIGYF1O75420 1035 aaPredicted RBP16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 DNM1Q05193 864 aaKnown RBP16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 TMEM87AQ8NBN3 555 aa16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 CYP46A1Q9Y6A2 500 aa16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 MTX1Q13505 466 aa16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 COL9A3Q14050 684 aaPredicted RBP16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 PXDNQ92626 1479 aa16.72■□□□□ 0.27
GAPVD1-205ENST00000394084 UBE2HP62256 183 aa16.71■□□□□ 0.27
GAPVD1-205ENST00000394084 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
GAPVD1-205ENST00000394084 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
GAPVD1-205ENST00000394084 TCEANC2Q96MN5 208 aa16.71■□□□□ 0.27
GAPVD1-205ENST00000394084 ALDH1L1O75891 902 aa16.71■□□□□ 0.26
GAPVD1-205ENST00000394084 GIMAP6Q6P9H5 292 aa16.71■□□□□ 0.26
GAPVD1-205ENST00000394084 TLR7Q9NYK1 1049 aaKnown RBP16.71■□□□□ 0.26
GAPVD1-205ENST00000394084 RBM8AQ9Y5S9 174 aaKnown RBP16.71■□□□□ 0.26
GAPVD1-205ENST00000394084 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 MCM5P33992 734 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 NMIQ13287 307 aaPredicted RBP16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 ME3Q16798 604 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 EVI5LQ96CN4 794 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 MTMR6Q9Y217 621 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 UQCRHLA0A096LP55 91 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 SASH1O94885 1247 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 UQCRHP07919 91 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 VPS53Q5VIR6 699 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 BOLA2Q9H3K6 86 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 NFAT5O94916 1531 aa16.7■□□□□ 0.26
GAPVD1-205ENST00000394084 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 GLIPR1L2Q4G1C9 344 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 ERC1Q8IUD2 1116 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 ZSWIM6Q9HCJ5 1215 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 ZKSCAN1P17029 563 aaPredicted RBP16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 KAZALD1Q96I82 304 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 FAM13BQ9NYF5 915 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 ATP6V1DQ9Y5K8 247 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 GRM8O00222 908 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 ADCY5O95622 1261 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 AMOTQ4VCS5 1084 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 CREB3L3Q68CJ9 461 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 FERMT3Q86UX7 667 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 ANKRD24Q8TF21 1146 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
GAPVD1-205ENST00000394084 GCP02774 474 aa16.68■□□□□ 0.26
GAPVD1-205ENST00000394084 NECTIN1Q15223 517 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms