RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SRGNP10124 158 aa23.27■■□□□ 1.32
SNRPA1-202ENST00000394082 TIAM2Q8IVF5 1701 aa23.27■■□□□ 1.32
SNRPA1-202ENST00000394082 CCDC88AQ3V6T2 1871 aa23.26■■□□□ 1.31
SNRPA1-202ENST00000394082 SOGA3Q5TF21 947 aa23.26■■□□□ 1.31
SNRPA1-202ENST00000394082 PRAMEF22A3QJZ6 481 aa23.25■■□□□ 1.31
SNRPA1-202ENST00000394082 NPHP1O15259 732 aa23.25■■□□□ 1.31
SNRPA1-202ENST00000394082 C21orf2O43822 256 aa23.25■■□□□ 1.31
SNRPA1-202ENST00000394082 DPY19L2Q6NUT2 758 aa23.25■■□□□ 1.31
SNRPA1-202ENST00000394082 MASTLQ96GX5 879 aa23.25■■□□□ 1.31
SNRPA1-202ENST00000394082 DICER1Q9UPY3 1922 aaKnown RBP23.25■■□□□ 1.31
SNRPA1-202ENST00000394082 KLRG2A4D1S0 409 aaPredicted RBP23.24■■□□□ 1.31
SNRPA1-202ENST00000394082 NEFMP07197 916 aa23.24■■□□□ 1.31
SNRPA1-202ENST00000394082 PNISRQ8TF01 805 aaKnown RBP23.24■■□□□ 1.31
SNRPA1-202ENST00000394082 ARFGEF2Q9Y6D5 1785 aa23.24■■□□□ 1.31
SNRPA1-202ENST00000394082 NBPF26B4DH59 902 aa23.23■■□□□ 1.31
SNRPA1-202ENST00000394082 DCTN1Q14203 1278 aa23.23■■□□□ 1.31
SNRPA1-202ENST00000394082 NBPF10Q6P3W6 841 aaKnown RBP23.23■■□□□ 1.31
SNRPA1-202ENST00000394082 CCDC24Q8N4L8 307 aa23.23■■□□□ 1.31
SNRPA1-202ENST00000394082 NBPF15Q8N660 670 aa23.23■■□□□ 1.31
SNRPA1-202ENST00000394082 KLRG1Q96E93 195 aa23.23■■□□□ 1.31
SNRPA1-202ENST00000394082 PRPF40BQ6NWY9 871 aaKnown RBP23.22■■□□□ 1.31
SNRPA1-202ENST00000394082 TPTE2Q6XPS3 522 aa23.22■■□□□ 1.31
SNRPA1-202ENST00000394082 NBPF5PQ86XG9 351 aaPredicted RBP23.22■■□□□ 1.31
SNRPA1-202ENST00000394082 JMYQ8N9B5 988 aa23.22■■□□□ 1.31
SNRPA1-202ENST00000394082 TAOK3Q9H2K8 898 aa23.22■■□□□ 1.31
SNRPA1-202ENST00000394082 PIP4K2AP48426 406 aaPredicted RBP23.21■■□□□ 1.31
SNRPA1-202ENST00000394082 ERFEQ4G0M1 354 aa23.21■■□□□ 1.31
SNRPA1-202ENST00000394082 PLEKHF1Q96S99 279 aa23.21■■□□□ 1.31
SNRPA1-202ENST00000394082 SLX4Q8IY92 1834 aa23.2■■□□□ 1.3
SNRPA1-202ENST00000394082 C7orf43Q8WVR3 580 aa23.2■■□□□ 1.3
SNRPA1-202ENST00000394082 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
SNRPA1-202ENST00000394082 LAMB4A4D0S4 1761 aa23.19■■□□□ 1.3
SNRPA1-202ENST00000394082 POTECB2RU33 542 aa23.19■■□□□ 1.3
SNRPA1-202ENST00000394082 NPR1P16066 1061 aa23.19■■□□□ 1.3
SNRPA1-202ENST00000394082 NIP7Q9Y221 180 aaKnown RBP eCLIP23.18■■□□□ 1.3
SNRPA1-202ENST00000394082 KDM3BQ7LBC6 1761 aa23.17■■□□□ 1.3
SNRPA1-202ENST00000394082 PCNTO95613 3336 aa23.17■■□□□ 1.3
SNRPA1-202ENST00000394082 ERVV-1B6SEH8 477 aa23.17■■□□□ 1.3
SNRPA1-202ENST00000394082 DLG5Q8TDM6 1919 aa23.17■■□□□ 1.3
SNRPA1-202ENST00000394082 NFE2L2Q16236 605 aa23.16■■□□□ 1.3
SNRPA1-202ENST00000394082 ZNF219Q9P2Y4 722 aaPredicted RBP23.16■■□□□ 1.3
SNRPA1-202ENST00000394082 CCDC93Q567U6 631 aa23.15■■□□□ 1.3
SNRPA1-202ENST00000394082 MIS18AQ9NYP9 233 aa23.15■■□□□ 1.3
SNRPA1-202ENST00000394082 EIF4A1P60842 406 aaKnown RBP23.14■■□□□ 1.29
SNRPA1-202ENST00000394082 HTRA3P83110 453 aa23.14■■□□□ 1.29
SNRPA1-202ENST00000394082 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
SNRPA1-202ENST00000394082 ALDH1B1P30837 517 aa23.13■■□□□ 1.29
SNRPA1-202ENST00000394082 HLFQ16534 295 aa23.13■■□□□ 1.29
SNRPA1-202ENST00000394082 NYXQ9GZU5 481 aa23.12■■□□□ 1.29
SNRPA1-202ENST00000394082 ERBB4Q15303 1308 aa23.11■■□□□ 1.29
SNRPA1-202ENST00000394082 FKBP4Q02790 459 aaKnown RBP eCLIP23.11■■□□□ 1.29
SNRPA1-202ENST00000394082 CRY2Q49AN0 593 aa23.11■■□□□ 1.29
SNRPA1-202ENST00000394082 RTKN2Q8IZC4 609 aa23.11■■□□□ 1.29
SNRPA1-202ENST00000394082 IBTKQ9P2D0 1353 aaPredicted RBP23.11■■□□□ 1.29
SNRPA1-202ENST00000394082 MAP3K15Q6ZN16 1313 aa23.1■■□□□ 1.29
SNRPA1-202ENST00000394082 RIC1Q4ADV7 1423 aa23.1■■□□□ 1.29
SNRPA1-202ENST00000394082 L3MBTL3Q96JM7 780 aaPredicted RBP23.1■■□□□ 1.29
SNRPA1-202ENST00000394082 MAPK8IP3Q9UPT6 1336 aa23.09■■□□□ 1.29
SNRPA1-202ENST00000394082 IQCA1LA6NCM1 817 aa23.09■■□□□ 1.29
SNRPA1-202ENST00000394082 GTF2E1P29083 439 aaPredicted RBP23.09■■□□□ 1.29
SNRPA1-202ENST00000394082 BABAM1Q9NWV8 329 aa23.09■■□□□ 1.29
SNRPA1-202ENST00000394082 DDNO94850 711 aaPredicted RBP23.08■■□□□ 1.29
SNRPA1-202ENST00000394082 KIF6Q6ZMV9 814 aa23.08■■□□□ 1.29
SNRPA1-202ENST00000394082 NUP98P52948 1817 aa23.08■■□□□ 1.28
SNRPA1-202ENST00000394082 RALBP1Q15311 655 aa23.07■■□□□ 1.28
SNRPA1-202ENST00000394082 CHADLQ6NUI6 762 aa23.07■■□□□ 1.28
SNRPA1-202ENST00000394082 SCN4AP35499 1836 aa23.07■■□□□ 1.28
SNRPA1-202ENST00000394082 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
SNRPA1-202ENST00000394082 CC2D2BQ6DHV5 1058 aa23.06■■□□□ 1.28
SNRPA1-202ENST00000394082 HOXA10P31260 410 aaPredicted RBP23.05■■□□□ 1.28
SNRPA1-202ENST00000394082 PSMD1Q99460 953 aa23.05■■□□□ 1.28
SNRPA1-202ENST00000394082 THUMPD2Q9BTF0 503 aaKnown RBP23.05■■□□□ 1.28
SNRPA1-202ENST00000394082 RRP7AQ9Y3A4 280 aaKnown RBP23.05■■□□□ 1.28
SNRPA1-202ENST00000394082 SNED1Q8TER0 1413 aa23.05■■□□□ 1.28
SNRPA1-202ENST00000394082 FAM177BA6PVY3 158 aa23.04■■□□□ 1.28
SNRPA1-202ENST00000394082 TTLL7Q6ZT98 887 aa23.04■■□□□ 1.28
SNRPA1-202ENST00000394082 ABCC12Q96J65 1359 aa23.03■■□□□ 1.28
SNRPA1-202ENST00000394082 GIGYF2Q6Y7W6 1299 aaKnown RBP23.03■■□□□ 1.28
SNRPA1-202ENST00000394082 LDHDQ86WU2 507 aa23.03■■□□□ 1.28
SNRPA1-202ENST00000394082 ZNF34Q8IZ26 560 aa23.03■■□□□ 1.28
SNRPA1-202ENST00000394082 NGEFQ8N5V2 710 aa23.03■■□□□ 1.28
SNRPA1-202ENST00000394082 CREBZFQ9NS37 354 aa23.03■■□□□ 1.28
SNRPA1-202ENST00000394082 FZD9O00144 591 aa23.02■■□□□ 1.28
SNRPA1-202ENST00000394082 MYL6BP14649 208 aa23.02■■□□□ 1.28
SNRPA1-202ENST00000394082 LMOD3Q0VAK6 560 aa23.02■■□□□ 1.28
SNRPA1-202ENST00000394082 TAF1DQ9H5J8 278 aaPredicted RBP23.02■■□□□ 1.28
SNRPA1-202ENST00000394082 ZNF277Q9NRM2 450 aaPredicted RBP23.02■■□□□ 1.28
SNRPA1-202ENST00000394082 TSPYL4Q9UJ04 414 aa23.02■■□□□ 1.28
SNRPA1-202ENST00000394082 UBN2Q6ZU65 1347 aa23.02■■□□□ 1.28
SNRPA1-202ENST00000394082 IARSP41252 1262 aaKnown RBP23.01■■□□□ 1.27
SNRPA1-202ENST00000394082 PARP10Q53GL7 1025 aa23.01■■□□□ 1.27
SNRPA1-202ENST00000394082 LRP10Q7Z4F1 713 aa23.01■■□□□ 1.27
SNRPA1-202ENST00000394082 NUTM1Q86Y26 1132 aa23.01■■□□□ 1.27
SNRPA1-202ENST00000394082 RIPK4P57078 832 aa23■■□□□ 1.27
SNRPA1-202ENST00000394082 SYNE4Q8N205 404 aa23■■□□□ 1.27
SNRPA1-202ENST00000394082 CRAMP1Q96RY5 1269 aa23■■□□□ 1.27
SNRPA1-202ENST00000394082 PDIA6Q15084 440 aa22.99■■□□□ 1.27
SNRPA1-202ENST00000394082 SUSD4Q5VX71 490 aa22.99■■□□□ 1.27
SNRPA1-202ENST00000394082 OLFM4Q6UX06 510 aa22.99■■□□□ 1.27
SNRPA1-202ENST00000394082 PPP1R42Q7Z4L9 355 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms