RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 FAM174AQ8TBP5 190 aa7.67□□□□□ -1.18
NPM1-203ENST00000393820 GPKOWQ92917 476 aaPredicted RBP eCLIP7.67□□□□□ -1.183e-13■□□□□ 10
NPM1-203ENST00000393820 CEP170BQ9Y4F5 1589 aaPredicted RBP7.66□□□□□ -1.18
NPM1-203ENST00000393820 SUPT6HQ7KZ85 1726 aaKnown RBP7.66□□□□□ -1.18
NPM1-203ENST00000393820 ANP32CO43423 234 aa7.66□□□□□ -1.18
NPM1-203ENST00000393820 VSIG8P0DPA2 414 aa7.66□□□□□ -1.18
NPM1-203ENST00000393820 DDX10Q13206 875 aaKnown RBP7.66□□□□□ -1.18
NPM1-203ENST00000393820 EHBP1Q8NDI1 1231 aa7.66□□□□□ -1.18
NPM1-203ENST00000393820 PCDHB9Q9Y5E1 797 aa7.66□□□□□ -1.18
NPM1-203ENST00000393820 WASF2Q9Y6W5 498 aa7.66□□□□□ -1.18
NPM1-203ENST00000393820 A2ML1A8K2U0 1454 aa7.66□□□□□ -1.18
NPM1-203ENST00000393820 UNCXA6NJT0 531 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L15C9J2P7 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L10C9JJH3 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L13C9JLJ4 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L11C9JVI0 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L21D6R901 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L18D6R9N7 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L22D6RA61 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L17D6RBQ6 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L19D6RCP7 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L20D6RJB6 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 ITGAEP38570 1179 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 USP17L24Q0WX57 530 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 CRTC2Q53ET0 693 aaPredicted RBP7.65□□□□□ -1.18
NPM1-203ENST00000393820 SLAIN2Q9P270 581 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 TLL2Q9Y6L7 1015 aa7.65□□□□□ -1.18
NPM1-203ENST00000393820 CLTCQ00610 1675 aaKnown RBP7.65□□□□□ -1.19
NPM1-203ENST00000393820 GDF11O95390 407 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 TSPY4P0CV99 314 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 TSPY10P0CW01 314 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 SKIP12755 728 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 SSFA2P28290 1259 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 ARID5BQ14865 1188 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 THEMISQ8N1K5 641 aaPredicted RBP7.64□□□□□ -1.19
NPM1-203ENST00000393820 ZFP42Q96MM3 310 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 GPSM3Q9Y4H4 160 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 CCDC141Q6ZP82 1450 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 MYO3AQ8NEV4 1616 aa7.64□□□□□ -1.19
NPM1-203ENST00000393820 PZPP20742 1482 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 WASHC2CQ9Y4E1 1318 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 RBM47A0AV96 593 aaKnown RBP7.63□□□□□ -1.19
NPM1-203ENST00000393820 DNAJC14Q6Y2X3 702 aaPredicted RBP7.63□□□□□ -1.19
NPM1-203ENST00000393820 DEPDC4Q8N2C3 294 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 NLRP1Q9C000 1473 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 UBAP1LF5GYI3 381 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 KIF3BO15066 747 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 SIAH2O43255 324 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 RASSF7Q02833 373 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 PTK7Q13308 1070 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 ERICH6BQ5W0A0 696 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 ANKLE2Q86XL3 938 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 C1QTNF2Q9BXJ5 285 aa7.63□□□□□ -1.19
NPM1-203ENST00000393820 CPS1P31327 1500 aa7.62□□□□□ -1.19
NPM1-203ENST00000393820 KDM5DQ9BY66 1539 aa7.62□□□□□ -1.19
NPM1-203ENST00000393820 TNRQ92752 1358 aa7.62□□□□□ -1.19
NPM1-203ENST00000393820 ZNF335Q9H4Z2 1342 aaPredicted RBP7.62□□□□□ -1.19
NPM1-203ENST00000393820 ZNF644Q9H582 1327 aaPredicted RBP7.62□□□□□ -1.19
NPM1-203ENST00000393820 TOM1O60784 492 aa7.62□□□□□ -1.19
NPM1-203ENST00000393820 VARSP26640 1264 aaKnown RBP7.62□□□□□ -1.19
NPM1-203ENST00000393820 DZIP3Q86Y13 1208 aaKnown RBP7.62□□□□□ -1.19
NPM1-203ENST00000393820 CLP1Q92989 425 aaKnown RBP7.62□□□□□ -1.19
NPM1-203ENST00000393820 SIN3AQ96ST3 1273 aa7.62□□□□□ -1.19
NPM1-203ENST00000393820 MKRN1Q9UHC7 482 aaKnown RBP7.62□□□□□ -1.19
NPM1-203ENST00000393820 DNMT1P26358 1616 aaKnown RBP7.62□□□□□ -1.19
NPM1-203ENST00000393820 ARHGEF5Q12774 1597 aa7.61□□□□□ -1.19
NPM1-203ENST00000393820 MIA2Q96PC5 1412 aa7.61□□□□□ -1.19
NPM1-203ENST00000393820 RNF225M0QZC1 329 aaPredicted RBP7.61□□□□□ -1.19
NPM1-203ENST00000393820 RAB15P59190 212 aa7.61□□□□□ -1.19
NPM1-203ENST00000393820 NCOA4Q13772 614 aa7.61□□□□□ -1.19
NPM1-203ENST00000393820 RBM19Q9Y4C8 960 aaKnown RBP7.61□□□□□ -1.19
NPM1-203ENST00000393820 SPATA31D1Q6ZQQ2 1576 aa7.61□□□□□ -1.19
NPM1-203ENST00000393820 NCOA2Q15596 1464 aa7.61□□□□□ -1.19
NPM1-203ENST00000393820 ARID4AP29374 1257 aaPredicted RBP7.6□□□□□ -1.19
NPM1-203ENST00000393820 FAM50AQ14320 339 aaKnown RBP7.6□□□□□ -1.19
NPM1-203ENST00000393820 SLC10A4Q96EP9 437 aa7.6□□□□□ -1.19
NPM1-203ENST00000393820 IGSF5Q9NSI5 407 aa7.6□□□□□ -1.19
NPM1-203ENST00000393820 MED14O60244 1454 aa7.6□□□□□ -1.19
NPM1-203ENST00000393820 CAMSAP2Q08AD1 1489 aa7.6□□□□□ -1.19
NPM1-203ENST00000393820 GIGYF1O75420 1035 aaPredicted RBP7.59□□□□□ -1.19
NPM1-203ENST00000393820 SCARF1Q14162 830 aa7.59□□□□□ -1.19
NPM1-203ENST00000393820 TSGA10IPQ3SY00 556 aa7.59□□□□□ -1.19
NPM1-203ENST00000393820 ILDR2Q71H61 639 aa7.59□□□□□ -1.19
NPM1-203ENST00000393820 CEP126Q9P2H0 1117 aa7.59□□□□□ -1.19
NPM1-203ENST00000393820 SHANK2Q9UPX8 1470 aa7.59□□□□□ -1.2
NPM1-203ENST00000393820 SOWAHDA6NJG2 315 aa7.59□□□□□ -1.2
NPM1-203ENST00000393820 ATP5J2-PTCD1G3V325 749 aa7.59□□□□□ -1.2
NPM1-203ENST00000393820 ERCC3P19447 782 aa7.59□□□□□ -1.2
NPM1-203ENST00000393820 RASA1P20936 1047 aa7.59□□□□□ -1.2
NPM1-203ENST00000393820 GRM5P41594 1212 aa7.59□□□□□ -1.2
NPM1-203ENST00000393820 NOM1Q5C9Z4 860 aaKnown RBP7.59□□□□□ -1.2
NPM1-203ENST00000393820 VASH1Q7L8A9 365 aaPredicted RBP7.59□□□□□ -1.2
NPM1-203ENST00000393820 PHTF2Q8N3S3 785 aa7.59□□□□□ -1.2
NPM1-203ENST00000393820 DEPDC5O75140 1603 aa7.58□□□□□ -1.2
NPM1-203ENST00000393820 SERPINB4P48594 390 aa7.58□□□□□ -1.2
NPM1-203ENST00000393820 SLFNL1Q499Z3 407 aa7.58□□□□□ -1.2
NPM1-203ENST00000393820 LARP1Q6PKG0 1096 aaKnown RBP7.58□□□□□ -1.2
NPM1-203ENST00000393820 TRMT44Q8IYL2 757 aaKnown RBP7.58□□□□□ -1.2
NPM1-203ENST00000393820 PLPP7Q8NBV4 271 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms