RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 TSPYL6Q8N831 410 aa20.78■□□□□ 0.92
CSHL1-204ENST00000392824 SETDB2Q96T68 719 aa20.78■□□□□ 0.92
CSHL1-204ENST00000392824 ZNF521Q96K83 1311 aa20.78■□□□□ 0.92
CSHL1-204ENST00000392824 SERPINB2P05120 415 aa20.77■□□□□ 0.92
CSHL1-204ENST00000392824 AIMP1Q12904 312 aaKnown RBP20.77■□□□□ 0.92
CSHL1-204ENST00000392824 COPS6Q7L5N1 327 aa20.77■□□□□ 0.92
CSHL1-204ENST00000392824 SPINK5Q9NQ38 1064 aaPredicted RBP20.77■□□□□ 0.92
CSHL1-204ENST00000392824 HYPKQ9NX55 129 aa20.77■□□□□ 0.92
CSHL1-204ENST00000392824 MAP3K15Q6ZN16 1313 aa20.77■□□□□ 0.91
CSHL1-204ENST00000392824 C4AP0C0L4 1744 aa20.76■□□□□ 0.91
CSHL1-204ENST00000392824 XAGE3Q8WTP9 111 aa20.76■□□□□ 0.91
CSHL1-204ENST00000392824 ZBTB3Q9H5J0 574 aa20.76■□□□□ 0.91
CSHL1-204ENST00000392824 COL24A1Q17RW2 1714 aa20.75■□□□□ 0.91
CSHL1-204ENST00000392824 LAMB4A4D0S4 1761 aa20.75■□□□□ 0.91
CSHL1-204ENST00000392824 E9PSI1 815 aa20.75■□□□□ 0.91
CSHL1-204ENST00000392824 NPHP1O15259 732 aa20.75■□□□□ 0.91
CSHL1-204ENST00000392824 EXOSC9Q06265 439 aaKnown RBP20.75■□□□□ 0.91
CSHL1-204ENST00000392824 HLFQ16534 295 aa20.75■□□□□ 0.91
CSHL1-204ENST00000392824 LRP10Q7Z4F1 713 aa20.75■□□□□ 0.91
CSHL1-204ENST00000392824 NLGN2Q8NFZ4 835 aa20.74■□□□□ 0.91
CSHL1-204ENST00000392824 STK31Q9BXU1 1019 aa20.74■□□□□ 0.91
CSHL1-204ENST00000392824 NIP7Q9Y221 180 aaKnown RBP eCLIP20.74■□□□□ 0.91
CSHL1-204ENST00000392824 CARMIL3Q8ND23 1372 aa20.72■□□□□ 0.91
CSHL1-204ENST00000392824 TGFB2P61812 414 aa20.72■□□□□ 0.91
CSHL1-204ENST00000392824 HNRNPUQ00839 825 aaKnown RBP eCLIP20.71■□□□□ 0.91
CSHL1-204ENST00000392824 GIGYF2Q6Y7W6 1299 aaKnown RBP20.71■□□□□ 0.91
CSHL1-204ENST00000392824 ANKRD13DQ6ZTN6 518 aa20.71■□□□□ 0.91
CSHL1-204ENST00000392824 NBPF5PQ86XG9 351 aaPredicted RBP20.71■□□□□ 0.91
CSHL1-204ENST00000392824 VAMP4O75379 141 aa20.7■□□□□ 0.9
CSHL1-204ENST00000392824 SLFN5Q08AF3 891 aa20.7■□□□□ 0.9
CSHL1-204ENST00000392824 TCERG1O14776 1098 aaKnown RBP20.69■□□□□ 0.9
CSHL1-204ENST00000392824 GTF2E1P29083 439 aaPredicted RBP20.69■□□□□ 0.9
CSHL1-204ENST00000392824 HSP90AB3PQ58FF7 597 aa20.69■□□□□ 0.9
CSHL1-204ENST00000392824 TPTE2Q6XPS3 522 aa20.69■□□□□ 0.9
CSHL1-204ENST00000392824 PELP1Q8IZL8 1130 aaKnown RBP20.69■□□□□ 0.9
CSHL1-204ENST00000392824 CNBD1Q8NA66 436 aa20.69■□□□□ 0.9
CSHL1-204ENST00000392824 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
CSHL1-204ENST00000392824 SLC4A2P04920 1241 aa20.68■□□□□ 0.9
CSHL1-204ENST00000392824 ST5P78524 1137 aa20.68■□□□□ 0.9
CSHL1-204ENST00000392824 GPR162Q16538 588 aa20.68■□□□□ 0.9
CSHL1-204ENST00000392824 PLBD2Q8NHP8 589 aa20.68■□□□□ 0.9
CSHL1-204ENST00000392824 CDCA7LQ96GN5 454 aa20.68■□□□□ 0.9
CSHL1-204ENST00000392824 PHAXQ9H814 394 aaKnown RBP20.68■□□□□ 0.9
CSHL1-204ENST00000392824 A0A0G2JLW4 131 aa20.67■□□□□ 0.9
CSHL1-204ENST00000392824 DDX58O95786 925 aaKnown RBP20.67■□□□□ 0.9
CSHL1-204ENST00000392824 GPTP24298 496 aa20.67■□□□□ 0.9
CSHL1-204ENST00000392824 PRR5LQ6MZQ0 368 aa20.67■□□□□ 0.9
CSHL1-204ENST00000392824 RIC3Q7Z5B4 369 aa20.67■□□□□ 0.9
CSHL1-204ENST00000392824 C10orf71Q711Q0 1435 aa20.67■□□□□ 0.9
CSHL1-204ENST00000392824 ZNF34Q8IZ26 560 aa20.66■□□□□ 0.9
CSHL1-204ENST00000392824 NYXQ9GZU5 481 aa20.66■□□□□ 0.9
CSHL1-204ENST00000392824 SCN7AQ01118 1682 aa20.66■□□□□ 0.9
CSHL1-204ENST00000392824 DPEP1P16444 411 aa20.65■□□□□ 0.9
CSHL1-204ENST00000392824 TCIRG1Q13488 830 aa20.65■□□□□ 0.9
CSHL1-204ENST00000392824 PARP10Q53GL7 1025 aa20.65■□□□□ 0.9
CSHL1-204ENST00000392824 CCDC24Q8N4L8 307 aa20.65■□□□□ 0.9
CSHL1-204ENST00000392824 BRIP1Q9BX63 1249 aa20.65■□□□□ 0.9
CSHL1-204ENST00000392824 ATP10DQ9P241 1426 aa20.64■□□□□ 0.89
CSHL1-204ENST00000392824 PDE6BP35913 854 aa20.64■□□□□ 0.89
CSHL1-204ENST00000392824 PPP1R42Q7Z4L9 355 aa20.64■□□□□ 0.89
CSHL1-204ENST00000392824 PDZRN3Q9UPQ7 1066 aa20.63■□□□□ 0.89
CSHL1-204ENST00000392824 H0YIN7 160 aa20.62■□□□□ 0.89
CSHL1-204ENST00000392824 CHRNA5P30532 468 aa20.62■□□□□ 0.89
CSHL1-204ENST00000392824 SUSD4Q5VX71 490 aa20.62■□□□□ 0.89
CSHL1-204ENST00000392824 TRMT2AQ8IZ69 625 aaKnown RBP20.62■□□□□ 0.89
CSHL1-204ENST00000392824 UTP14AQ9BVJ6 771 aaKnown RBP20.62■□□□□ 0.89
CSHL1-204ENST00000392824 PIM2Q9P1W9 311 aa20.62■□□□□ 0.89
CSHL1-204ENST00000392824 WWC3Q9ULE0 1092 aa20.62■□□□□ 0.89
CSHL1-204ENST00000392824 UBN2Q6ZU65 1347 aa20.61■□□□□ 0.89
CSHL1-204ENST00000392824 C2CD5Q86YS7 1000 aa20.61■□□□□ 0.89
CSHL1-204ENST00000392824 BCORQ6W2J9 1755 aa20.61■□□□□ 0.89
CSHL1-204ENST00000392824 GRIN3BO60391 1043 aa20.6■□□□□ 0.89
CSHL1-204ENST00000392824 FLIIQ13045 1269 aa20.6■□□□□ 0.89
CSHL1-204ENST00000392824 KSR2Q6VAB6 950 aa20.6■□□□□ 0.89
CSHL1-204ENST00000392824 G2E3Q7L622 706 aa20.6■□□□□ 0.89
CSHL1-204ENST00000392824 PXDNLA1KZ92 1463 aa20.6■□□□□ 0.89
CSHL1-204ENST00000392824 PI4KAP2A4QPH2 592 aa20.59■□□□□ 0.89
CSHL1-204ENST00000392824 ATP5J2-PTCD1G3V325 749 aa20.59■□□□□ 0.89
CSHL1-204ENST00000392824 KCNA3P22001 575 aa20.59■□□□□ 0.89
CSHL1-204ENST00000392824 NLRP10Q86W26 655 aa20.59■□□□□ 0.89
CSHL1-204ENST00000392824 NUTM1Q86Y26 1132 aa20.59■□□□□ 0.89
CSHL1-204ENST00000392824 PI4KAP1Q8N8J0 262 aa20.59■□□□□ 0.89
CSHL1-204ENST00000392824 BCS1LQ9Y276 419 aa20.59■□□□□ 0.89
CSHL1-204ENST00000392824 FKBP5Q13451 457 aaPredicted RBP20.58■□□□□ 0.89
CSHL1-204ENST00000392824 ERFEQ4G0M1 354 aa20.58■□□□□ 0.89
CSHL1-204ENST00000392824 DALRD3Q5D0E6 543 aaKnown RBP20.58■□□□□ 0.89
CSHL1-204ENST00000392824 ZNF428Q96B54 188 aa20.58■□□□□ 0.89
CSHL1-204ENST00000392824 MYD88Q99836 296 aa20.58■□□□□ 0.89
CSHL1-204ENST00000392824 ISCA1Q9BUE6 129 aa20.58■□□□□ 0.89
CSHL1-204ENST00000392824 TRMT112Q9UI30 125 aaKnown RBP20.58■□□□□ 0.89
CSHL1-204ENST00000392824 MAP3K2Q9Y2U5 619 aa20.58■□□□□ 0.89
CSHL1-204ENST00000392824 NTSR2O95665 410 aa20.57■□□□□ 0.88
CSHL1-204ENST00000392824 CT47B1P0C2W7 299 aaPredicted RBP20.57■□□□□ 0.88
CSHL1-204ENST00000392824 YBX3P16989 372 aaKnown RBP eCLIP20.57■□□□□ 0.88
CSHL1-204ENST00000392824 NEXNQ0ZGT2 675 aa20.57■□□□□ 0.88
CSHL1-204ENST00000392824 TRIM28Q13263 835 aaKnown RBP20.57■□□□□ 0.88
CSHL1-204ENST00000392824 ZNF622Q969S3 477 aaKnown RBP eCLIP20.57■□□□□ 0.88
CSHL1-204ENST00000392824 METTL22Q9BUU2 404 aaPredicted RBP20.57■□□□□ 0.88
CSHL1-204ENST00000392824 IBTKQ9P2D0 1353 aaPredicted RBP20.57■□□□□ 0.88
CSHL1-204ENST00000392824 RNF123Q5XPI4 1314 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms