RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 SERPINB2P05120 415 aa26.8■■□□□ 1.88
CDCA4-202ENST00000392590 TSPYL6Q8N831 410 aa26.8■■□□□ 1.88
CDCA4-202ENST00000392590 SETDB2Q96T68 719 aa26.8■■□□□ 1.88
CDCA4-202ENST00000392590 CHMP4AQ9BY43 222 aa26.8■■□□□ 1.88
CDCA4-202ENST00000392590 SPINK5Q9NQ38 1064 aaPredicted RBP26.8■■□□□ 1.88
CDCA4-202ENST00000392590 MAP3K15Q6ZN16 1313 aa26.8■■□□□ 1.88
CDCA4-202ENST00000392590 GOLGA2Q08379 1002 aa26.8■■□□□ 1.88
CDCA4-202ENST00000392590 MYH16Q9H6N6 1097 aa26.8■■□□□ 1.88
CDCA4-202ENST00000392590 DCAF8L1A6NGE4 600 aa26.79■■□□□ 1.88
CDCA4-202ENST00000392590 HLFQ16534 295 aa26.79■■□□□ 1.88
CDCA4-202ENST00000392590 AIMP1Q12904 312 aaKnown RBP26.78■■□□□ 1.88
CDCA4-202ENST00000392590 COPS6Q7L5N1 327 aa26.78■■□□□ 1.88
CDCA4-202ENST00000392590 ZBTB3Q9H5J0 574 aa26.78■■□□□ 1.88
CDCA4-202ENST00000392590 TWISTNBQ3B726 338 aaPredicted RBP26.77■■□□□ 1.88
CDCA4-202ENST00000392590 XAGE3Q8WTP9 111 aa26.77■■□□□ 1.88
CDCA4-202ENST00000392590 CCDC30Q5VVM6 783 aa26.76■■□□□ 1.87
CDCA4-202ENST00000392590 HYPKQ9NX55 129 aa26.76■■□□□ 1.87
CDCA4-202ENST00000392590 SCN7AQ01118 1682 aa26.75■■□□□ 1.87
CDCA4-202ENST00000392590 CARMIL3Q8ND23 1372 aa26.75■■□□□ 1.87
CDCA4-202ENST00000392590 TGFB2P61812 414 aa26.75■■□□□ 1.87
CDCA4-202ENST00000392590 NIP7Q9Y221 180 aaKnown RBP eCLIP26.75■■□□□ 1.87
CDCA4-202ENST00000392590 C10orf71Q711Q0 1435 aa26.75■■□□□ 1.87
CDCA4-202ENST00000392590 EXOSC9Q06265 439 aaKnown RBP26.74■■□□□ 1.87
CDCA4-202ENST00000392590 GIGYF2Q6Y7W6 1299 aaKnown RBP26.73■■□□□ 1.87
CDCA4-202ENST00000392590 NPHP1O15259 732 aa26.72■■□□□ 1.87
CDCA4-202ENST00000392590 PELP1Q8IZL8 1130 aaKnown RBP26.71■■□□□ 1.87
CDCA4-202ENST00000392590 A0A0G2JLW4 131 aa26.7■■□□□ 1.87
CDCA4-202ENST00000392590 GPR162Q16538 588 aa26.7■■□□□ 1.87
CDCA4-202ENST00000392590 NBPF5PQ86XG9 351 aaPredicted RBP26.7■■□□□ 1.87
CDCA4-202ENST00000392590 E9PSI1 815 aa26.7■■□□□ 1.86
CDCA4-202ENST00000392590 PRR5LQ6MZQ0 368 aa26.7■■□□□ 1.86
CDCA4-202ENST00000392590 CNBD1Q8NA66 436 aa26.7■■□□□ 1.86
CDCA4-202ENST00000392590 STK31Q9BXU1 1019 aa26.7■■□□□ 1.86
CDCA4-202ENST00000392590 BCORQ6W2J9 1755 aa26.69■■□□□ 1.86
CDCA4-202ENST00000392590 TCERG1O14776 1098 aaKnown RBP26.69■■□□□ 1.86
CDCA4-202ENST00000392590 VAMP4O75379 141 aa26.69■■□□□ 1.86
CDCA4-202ENST00000392590 ANKRD13DQ6ZTN6 518 aa26.69■■□□□ 1.86
CDCA4-202ENST00000392590 FAM177BA6PVY3 158 aa26.68■■□□□ 1.86
CDCA4-202ENST00000392590 DPEP1P16444 411 aa26.68■■□□□ 1.86
CDCA4-202ENST00000392590 GPTP24298 496 aa26.68■■□□□ 1.86
CDCA4-202ENST00000392590 TPTE2Q6XPS3 522 aa26.68■■□□□ 1.86
CDCA4-202ENST00000392590 PLBD2Q8NHP8 589 aa26.68■■□□□ 1.86
CDCA4-202ENST00000392590 PHAXQ9H814 394 aaKnown RBP26.68■■□□□ 1.86
CDCA4-202ENST00000392590 ZNF34Q8IZ26 560 aa26.67■■□□□ 1.86
CDCA4-202ENST00000392590 CCDC24Q8N4L8 307 aa26.67■■□□□ 1.86
CDCA4-202ENST00000392590 ATP10DQ9P241 1426 aa26.67■■□□□ 1.86
CDCA4-202ENST00000392590 ST5P78524 1137 aa26.66■■□□□ 1.86
CDCA4-202ENST00000392590 SLFN5Q08AF3 891 aa26.66■■□□□ 1.86
CDCA4-202ENST00000392590 WWC3Q9ULE0 1092 aa26.66■■□□□ 1.86
CDCA4-202ENST00000392590 PXDNLA1KZ92 1463 aa26.66■■□□□ 1.86
CDCA4-202ENST00000392590 HSP90AB3PQ58FF7 597 aa26.65■■□□□ 1.86
CDCA4-202ENST00000392590 BRIP1Q9BX63 1249 aa26.65■■□□□ 1.86
CDCA4-202ENST00000392590 GTF2E1P29083 439 aaPredicted RBP26.65■■□□□ 1.86
CDCA4-202ENST00000392590 CHRNA5P30532 468 aa26.65■■□□□ 1.86
CDCA4-202ENST00000392590 CDCA7LQ96GN5 454 aa26.65■■□□□ 1.86
CDCA4-202ENST00000392590 SLC4A2P04920 1241 aa26.64■■□□□ 1.85
CDCA4-202ENST00000392590 TCIRG1Q13488 830 aa26.64■■□□□ 1.85
CDCA4-202ENST00000392590 UBN2Q6ZU65 1347 aa26.63■■□□□ 1.85
CDCA4-202ENST00000392590 KCNA3P22001 575 aa26.63■■□□□ 1.85
CDCA4-202ENST00000392590 PDE6BP35913 854 aa26.63■■□□□ 1.85
CDCA4-202ENST00000392590 RIC3Q7Z5B4 369 aa26.63■■□□□ 1.85
CDCA4-202ENST00000392590 NYXQ9GZU5 481 aa26.63■■□□□ 1.85
CDCA4-202ENST00000392590 NRXN2Q9P2S2 1712 aa26.63■■□□□ 1.85
CDCA4-202ENST00000392590 YBX3P16989 372 aaKnown RBP eCLIP26.62■■□□□ 1.85
CDCA4-202ENST00000392590 HNRNPUQ00839 825 aaKnown RBP eCLIP26.62■■□□□ 1.85
CDCA4-202ENST00000392590 PARP10Q53GL7 1025 aa26.62■■□□□ 1.85
CDCA4-202ENST00000392590 SUSD4Q5VX71 490 aa26.62■■□□□ 1.85
CDCA4-202ENST00000392590 KIF13BQ9NQT8 1826 aa26.62■■□□□ 1.85
CDCA4-202ENST00000392590 DDX58O95786 925 aaKnown RBP26.61■■□□□ 1.85
CDCA4-202ENST00000392590 PPP1R42Q7Z4L9 355 aa26.61■■□□□ 1.85
CDCA4-202ENST00000392590 C2CD5Q86YS7 1000 aa26.61■■□□□ 1.85
CDCA4-202ENST00000392590 PIM2Q9P1W9 311 aa26.61■■□□□ 1.85
CDCA4-202ENST00000392590 AFDNP55196 1824 aaKnown RBP26.61■■□□□ 1.85
CDCA4-202ENST00000392590 H0YIN7 160 aa26.6■■□□□ 1.85
CDCA4-202ENST00000392590 PDZRN3Q9UPQ7 1066 aa26.6■■□□□ 1.85
CDCA4-202ENST00000392590 GRIN3BO60391 1043 aa26.59■■□□□ 1.85
CDCA4-202ENST00000392590 NUTM1Q86Y26 1132 aa26.59■■□□□ 1.85
CDCA4-202ENST00000392590 BCS1LQ9Y276 419 aa26.59■■□□□ 1.85
CDCA4-202ENST00000392590 G2E3Q7L622 706 aa26.58■■□□□ 1.85
CDCA4-202ENST00000392590 NLRP10Q86W26 655 aa26.58■■□□□ 1.85
CDCA4-202ENST00000392590 TRMT2AQ8IZ69 625 aaKnown RBP26.58■■□□□ 1.85
CDCA4-202ENST00000392590 UTP14AQ9BVJ6 771 aaKnown RBP26.58■■□□□ 1.85
CDCA4-202ENST00000392590 NUP98P52948 1817 aa26.57■■□□□ 1.84
CDCA4-202ENST00000392590 NTSR2O95665 410 aa26.56■■□□□ 1.84
CDCA4-202ENST00000392590 ERFEQ4G0M1 354 aa26.56■■□□□ 1.84
CDCA4-202ENST00000392590 DALRD3Q5D0E6 543 aaKnown RBP26.56■■□□□ 1.84
CDCA4-202ENST00000392590 IBTKQ9P2D0 1353 aaPredicted RBP26.56■■□□□ 1.84
CDCA4-202ENST00000392590 ATP5J2-PTCD1G3V325 749 aa26.55■■□□□ 1.84
CDCA4-202ENST00000392590 KSR2Q6VAB6 950 aa26.55■■□□□ 1.84
CDCA4-202ENST00000392590 ISCA1Q9BUE6 129 aa26.55■■□□□ 1.84
CDCA4-202ENST00000392590 PI4KAP2A4QPH2 592 aa26.55■■□□□ 1.84
CDCA4-202ENST00000392590 FLIIQ13045 1269 aa26.55■■□□□ 1.84
CDCA4-202ENST00000392590 PI4KAP1Q8N8J0 262 aa26.55■■□□□ 1.84
CDCA4-202ENST00000392590 ZNF622Q969S3 477 aaKnown RBP eCLIP26.55■■□□□ 1.84
CDCA4-202ENST00000392590 MAP3K2Q9Y2U5 619 aa26.55■■□□□ 1.84
CDCA4-202ENST00000392590 KIAA1551Q9HCM1 1747 aa26.54■■□□□ 1.84
CDCA4-202ENST00000392590 N4BP2Q86UW6 1770 aaPredicted RBP26.54■■□□□ 1.84
CDCA4-202ENST00000392590 TRIM28Q13263 835 aaKnown RBP26.53■■□□□ 1.84
CDCA4-202ENST00000392590 MYD88Q99836 296 aa26.53■■□□□ 1.84
CDCA4-202ENST00000392590 METTL22Q9BUU2 404 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms